BLASTX nr result
ID: Lithospermum22_contig00021868
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00021868
(1111 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272784.1| PREDICTED: pentatricopeptide repeat-containi... 385 e-104
emb|CAN75708.1| hypothetical protein VITISV_031421 [Vitis vinifera] 381 e-103
ref|XP_002517971.1| pentatricopeptide repeat-containing protein,... 373 e-101
ref|XP_004141647.1| PREDICTED: pentatricopeptide repeat-containi... 338 1e-90
ref|XP_004169587.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 334 2e-89
>ref|XP_002272784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73710-like
[Vitis vinifera]
Length = 1008
Score = 385 bits (989), Expect = e-104
Identities = 202/327 (61%), Positives = 243/327 (74%), Gaps = 7/327 (2%)
Frame = -3
Query: 962 FVGFNINTYGSCSSLTILDNSCFCTSLHDKSNPL----HTQK--LNCKERRVFVGFRLQC 801
F GFN ++ SL +S DKS HTQK LN + RVF GF+LQC
Sbjct: 43 FWGFNFHSQNLAKSLNCTFRLTLSSSKIDKSLGRNAYSHTQKQRLNPRGARVFPGFKLQC 102
Query: 800 CSKAVILXXXXXXXXXXKRYGGVLPAILQSLESENDVGRALDVYRGKLSPKEQTVVLKEQ 621
S+ V L K+Y GVLP+IL++LESEN++ L GKLSPKEQTV+LKEQ
Sbjct: 103 HSRTVALPTKTSISRRKKKYSGVLPSILRALESENNIEDTLSSC-GKLSPKEQTVILKEQ 161
Query: 620 RSWDKVLRVFEWMKSHKEYLPNVIHYNVVLRALGRAKKWDELRLCWIDMAKNGVVPTNNT 441
SW++VLRVFEW+KS ++Y+PNVIHYNVVLR LGRA+KWDELRLCWI+MAKNGV+PTNNT
Sbjct: 162 SSWERVLRVFEWIKSQEDYVPNVIHYNVVLRVLGRAQKWDELRLCWIEMAKNGVLPTNNT 221
Query: 440 YSMLVDVYGKAGLVKESLLWIKHMKLRGFFPDEVTMNTLVRVLKDAGEYDRGIKFYKDWC 261
Y MLVDVYGKAGLVKE+LLWIKHMKLRG FPDEV MNT+VRVLKDAGE+D +FY+DWC
Sbjct: 222 YGMLVDVYGKAGLVKEALLWIKHMKLRGVFPDEVAMNTVVRVLKDAGEFDWADRFYRDWC 281
Query: 260 IGKIDLDDVFLDSLENADVKVGSEPVSLKHYLLTELFRTGGRSHHPGNMGMSN-EQTMRI 84
+GK++L D L+S+ ++D ++GS PVSLKH+L TELF+ GGR M SN + + R
Sbjct: 282 VGKVELGDFDLESVADSDDEIGSAPVSLKHFLSTELFKIGGRRPISNIMDSSNTDGSRRK 341
Query: 83 PLRTSTYNTLIDLYGKAGRLKDAADTF 3
P T+TYNTLIDLYGKAGRLKDAAD F
Sbjct: 342 PRLTATYNTLIDLYGKAGRLKDAADVF 368
>emb|CAN75708.1| hypothetical protein VITISV_031421 [Vitis vinifera]
Length = 1313
Score = 381 bits (978), Expect = e-103
Identities = 201/327 (61%), Positives = 240/327 (73%), Gaps = 7/327 (2%)
Frame = -3
Query: 962 FVGFNINTYGSCSSLTILDNSCFCTSLHDKSNPL----HTQK--LNCKERRVFVGFRLQC 801
F GFN ++ SL + DKS HTQK LN + RVF GF+LQC
Sbjct: 348 FWGFNFHSQNLAKSLNCTFRLTLSSXKIDKSLGRNAYSHTQKQRLNPRGARVFPGFKLQC 407
Query: 800 CSKAVILXXXXXXXXXXKRYGGVLPAILQSLESENDVGRALDVYRGKLSPKEQTVVLKEQ 621
S+ V L K+Y GVLP+IL++LESE ++ L GKLSPKEQTV+LKEQ
Sbjct: 408 HSRTVALPTKTSISRRKKKYSGVLPSILRALESEXNIEDTLSSC-GKLSPKEQTVILKEQ 466
Query: 620 RSWDKVLRVFEWMKSHKEYLPNVIHYNVVLRALGRAKKWDELRLCWIDMAKNGVVPTNNT 441
SW++VLRVFEW+KS ++Y+PNVIHYNVVLR LGRA+KWDELRLCWI+MAKNGV+PTNNT
Sbjct: 467 SSWERVLRVFEWIKSQEDYVPNVIHYNVVLRVLGRAQKWDELRLCWIEMAKNGVLPTNNT 526
Query: 440 YSMLVDVYGKAGLVKESLLWIKHMKLRGFFPDEVTMNTLVRVLKDAGEYDRGIKFYKDWC 261
Y MLVDVYGKAGLVKE+LLWIKHMKLRG FPDEVTMNT+VRVLKDAGE+D +FY+DWC
Sbjct: 527 YGMLVDVYGKAGLVKEALLWIKHMKLRGVFPDEVTMNTVVRVLKDAGEFDWADRFYRDWC 586
Query: 260 IGKIDLDDVFLDSLENADVKVGSEPVSLKHYLLTELFRTGGRSHHPGNMGMSNEQTMR-I 84
+GK++L D L+S+ ++D ++GS PVSLKH+L TELF+ GGR M SN R
Sbjct: 587 VGKVELGDFDLESVADSDDEIGSAPVSLKHFLSTELFKIGGRRPISNIMDSSNTDGSRHK 646
Query: 83 PLRTSTYNTLIDLYGKAGRLKDAADTF 3
P T+TYNTLIDLYGKAGRLKDAAD F
Sbjct: 647 PRLTATYNTLIDLYGKAGRLKDAADVF 673
>ref|XP_002517971.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542953|gb|EEF44489.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1029
Score = 373 bits (958), Expect = e-101
Identities = 201/377 (53%), Positives = 257/377 (68%), Gaps = 12/377 (3%)
Frame = -3
Query: 1097 LGFYINTHDSCPSSTMVQNTSLCTSLYKKSNLLHTQKLNCKERMVFVGFNINTYGSCSSL 918
L Y T+ PSS +++ +L + S H + + F GFN +
Sbjct: 2 LNGYSYTYSCSPSSRKLKHETLHHHISSPSK--HLSLKSPSKASTFTGFNQS-------- 51
Query: 917 TILDNSCFCTSLHDKSNPLHTQKLNC----------KERRVFVGFRLQCCSKAVILXXXX 768
N F S H NP +++ C ++ RV +GF+L C SK + L
Sbjct: 52 ---HNHNFDKSQHFPCNPTVYRRVGCSLSPKQRTPQEKNRVSLGFKLHCHSKTLTLPTRN 108
Query: 767 XXXXXXK-RYGGVLPAILQSLESENDVGRALDVYRGKLSPKEQTVVLKEQRSWDKVLRVF 591
K RYGGVLP+IL+SL S+ND+ + L+ + L+PKEQTV+LKEQR+W++++RVF
Sbjct: 109 SSFNGKKKRYGGVLPSILRSLNSDNDIEKTLNSFGDNLNPKEQTVILKEQRNWERMVRVF 168
Query: 590 EWMKSHKEYLPNVIHYNVVLRALGRAKKWDELRLCWIDMAKNGVVPTNNTYSMLVDVYGK 411
E+ KS K+Y+PNVIHYN+VLRALGRA+KWD+LR CWI+MAK+GV+PTNNTY MLVDVYGK
Sbjct: 169 EFFKSRKDYVPNVIHYNIVLRALGRAQKWDDLRRCWIEMAKSGVLPTNNTYGMLVDVYGK 228
Query: 410 AGLVKESLLWIKHMKLRGFFPDEVTMNTLVRVLKDAGEYDRGIKFYKDWCIGKIDLDDVF 231
AGLV E+LLWIKHMKLRG FPDEVTMNT+V+VLKDAGE+DR FYKDWCIGKI+LDD+
Sbjct: 229 AGLVTEALLWIKHMKLRGLFPDEVTMNTVVKVLKDAGEFDRAHSFYKDWCIGKIELDDLE 288
Query: 230 LDSLENADVKVGSEPVSLKHYLLTELFRTGGRSHHPGNMGMSN-EQTMRIPLRTSTYNTL 54
L+S+ + + GS PVS KH+L TELF+ GGR P +G S+ E+ +R P TSTYNTL
Sbjct: 289 LNSMGDIEHGSGSGPVSFKHFLSTELFKIGGRIRTPKIVGSSDAEKIVRKPRLTSTYNTL 348
Query: 53 IDLYGKAGRLKDAADTF 3
IDLYGKAGRL DAAD F
Sbjct: 349 IDLYGKAGRLGDAADIF 365
>ref|XP_004141647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Cucumis sativus]
Length = 1020
Score = 338 bits (868), Expect = 1e-90
Identities = 170/289 (58%), Positives = 219/289 (75%), Gaps = 2/289 (0%)
Frame = -3
Query: 863 LHTQKLNCKERRVFVGFRLQCCSKAVILXXXXXXXXXXKR-YGGVLPAILQSLESENDVG 687
L++QK ++ +V +GF+LQC S+ + + K+ YGG+LP+IL+SL+S +D+G
Sbjct: 57 LNSQKHVNRDLKVSLGFKLQCHSRTLSMASQRLSTNGKKKSYGGILPSILRSLKSASDIG 116
Query: 686 RALDVYRGKLSPKEQTVVLKEQRSWDKVLRVFEWMKSHKEYLPNVIHYNVVLRALGRAKK 507
L LSPKEQTV+LKEQ W++V++VF+W KS K+Y+PNVIHYN+VLR LG+A+K
Sbjct: 117 NILSSSCQNLSPKEQTVILKEQSRWERVIQVFQWFKSQKDYVPNVIHYNIVLRTLGQAQK 176
Query: 506 WDELRLCWIDMAKNGVVPTNNTYSMLVDVYGKAGLVKESLLWIKHMKLRGFFPDEVTMNT 327
WDELRLCW +MA+NGVVPTNNTY ML+DVYGK GLVKE+LLWIKHM +RG FPDEVTMNT
Sbjct: 177 WDELRLCWNEMAENGVVPTNNTYGMLIDVYGKVGLVKEALLWIKHMTVRGIFPDEVTMNT 236
Query: 326 LVRVLKDAGEYDRGIKFYKDWCIGKIDLDDVFLDS-LENADVKVGSEPVSLKHYLLTELF 150
+VRVLKDAGE+D KFYKDWC G ++L+D L+S +E+ V EP++ KH+LLTELF
Sbjct: 237 VVRVLKDAGEFDSADKFYKDWCRGLVELNDFDLNSRVEDFGVNSAVEPITPKHFLLTELF 296
Query: 149 RTGGRSHHPGNMGMSNEQTMRIPLRTSTYNTLIDLYGKAGRLKDAADTF 3
R G R + + + +R P TSTYNTLIDLYGKAGRLKDAA+ F
Sbjct: 297 RIGTRIPN-RKVSPEVDNCVRKPRLTSTYNTLIDLYGKAGRLKDAANVF 344
Score = 67.8 bits (164), Expect = 5e-09
Identities = 55/247 (22%), Positives = 108/247 (43%), Gaps = 8/247 (3%)
Frame = -3
Query: 731 LPAILQSLESENDVGRA---LDVYR--GKLSPKEQTVVLK---EQRSWDKVLRVFEWMKS 576
LP +++ +E + RA L+ YR +LSP+ ++ E+ W + +F W +
Sbjct: 464 LPRVIKMYINEGLLDRAKILLEKYRLDTELSPRISAAIIDAYAEKGLWFEAESIFLWKRD 523
Query: 575 HKEYLPNVIHYNVVLRALGRAKKWDELRLCWIDMAKNGVVPTNNTYSMLVDVYGKAGLVK 396
+V+ YNV+++A G+A+ +++ L + M G P TY+ L+ ++ LV
Sbjct: 524 LSGKKMDVMEYNVMIKAYGKAELYEKAFLLFKSMKNRGTWPDECTYNSLIQMFSGGDLVD 583
Query: 395 ESLLWIKHMKLRGFFPDEVTMNTLVRVLKDAGEYDRGIKFYKDWCIGKIDLDDVFLDSLE 216
E+ + M+ GF P T + ++ G ++ Y ++ +++ L
Sbjct: 584 EARRLLTEMQRMGFKPTCQTFSAVIASYARLGLMSDAVEVYDMMVHADVEPNEILYGVLV 643
Query: 215 NADVKVGSEPVSLKHYLLTELFRTGGRSHHPGNMGMSNEQTMRIPLRTSTYNTLIDLYGK 36
N ++G +LK++ L E G++ Q + +LI + K
Sbjct: 644 NGFAEIGQAEEALKYFRLME------------KSGIAENQIV--------LTSLIKAFSK 683
Query: 35 AGRLKDA 15
G L+DA
Sbjct: 684 VGSLEDA 690
>ref|XP_004169587.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g73710-like [Cucumis sativus]
Length = 1026
Score = 334 bits (857), Expect = 2e-89
Identities = 168/289 (58%), Positives = 217/289 (75%), Gaps = 2/289 (0%)
Frame = -3
Query: 863 LHTQKLNCKERRVFVGFRLQCCSKAVILXXXXXXXXXXKR-YGGVLPAILQSLESENDVG 687
L++QK ++ +V +GF+LQC S+ + + K+ YGG+LP+IL+SL+S +D+G
Sbjct: 57 LNSQKHVNRDLKVSLGFKLQCHSRTLSMASQRLSTNGKKKSYGGILPSILRSLKSASDIG 116
Query: 686 RALDVYRGKLSPKEQTVVLKEQRSWDKVLRVFEWMKSHKEYLPNVIHYNVVLRALGRAKK 507
L LSPKEQTV+LKEQ W++V++VF+W KS K+Y+PNVIHYN+VLR LG+A+K
Sbjct: 117 SILSSSCQNLSPKEQTVILKEQSRWERVIQVFQWFKSQKDYVPNVIHYNIVLRTLGQAQK 176
Query: 506 WDELRLCWIDMAKNGVVPTNNTYSMLVDVYGKAGLVKESLLWIKHMKLRGFFPDEVTMNT 327
WDELRLCW +MA+NGVVPTNNTY ML+DVYGK GLVKE+LLWIKHM +RG FPDEVTMNT
Sbjct: 177 WDELRLCWNEMAENGVVPTNNTYGMLIDVYGKVGLVKEALLWIKHMTVRGIFPDEVTMNT 236
Query: 326 LVRVLKDAGEYDRGIKFYKDWCIGKIDLDDVFLDS-LENADVKVGSEPVSLKHYLLTELF 150
+VRVLKDAGE+D KFYKDWC G ++L+D L+S +E+ V EP++ KH+ TELF
Sbjct: 237 VVRVLKDAGEFDSADKFYKDWCRGLVELNDFDLNSRVEDFGVNSAVEPITPKHFCXTELF 296
Query: 149 RTGGRSHHPGNMGMSNEQTMRIPLRTSTYNTLIDLYGKAGRLKDAADTF 3
R G R + + + +R P TSTYNTLIDLYGKAGRLKDAA+ F
Sbjct: 297 RIGTRIPN-RKVSPEVDNCVRKPRLTSTYNTLIDLYGKAGRLKDAANVF 344
Score = 67.8 bits (164), Expect = 5e-09
Identities = 55/247 (22%), Positives = 108/247 (43%), Gaps = 8/247 (3%)
Frame = -3
Query: 731 LPAILQSLESENDVGRA---LDVYR--GKLSPKEQTVVLK---EQRSWDKVLRVFEWMKS 576
LP +++ +E + RA L+ YR +LSP+ ++ E+ W + +F W +
Sbjct: 464 LPRVIKMYINEGLLDRAKILLEKYRLDTELSPRISAAIIDAYAEKGLWFEAESIFLWKRD 523
Query: 575 HKEYLPNVIHYNVVLRALGRAKKWDELRLCWIDMAKNGVVPTNNTYSMLVDVYGKAGLVK 396
+V+ YNV+++A G+A+ +++ L + M G P TY+ L+ ++ LV
Sbjct: 524 LAGKKXDVMEYNVMIKAYGKAELYEKAFLLFKSMKNRGTWPDECTYNSLIQMFSGGDLVD 583
Query: 395 ESLLWIKHMKLRGFFPDEVTMNTLVRVLKDAGEYDRGIKFYKDWCIGKIDLDDVFLDSLE 216
E+ + M+ GF P T + ++ G ++ Y ++ +++ L
Sbjct: 584 EARRLLTEMQRMGFKPTCQTFSAVIASYARLGLMSDAVEVYDMMVHADVEPNEILYGVLV 643
Query: 215 NADVKVGSEPVSLKHYLLTELFRTGGRSHHPGNMGMSNEQTMRIPLRTSTYNTLIDLYGK 36
N ++G +LK++ L E G++ Q + +LI + K
Sbjct: 644 NGFAEIGQAEEALKYFRLME------------KSGIAENQIV--------LTSLIKAFSK 683
Query: 35 AGRLKDA 15
G L+DA
Sbjct: 684 VGSLEDA 690