BLASTX nr result

ID: Lithospermum22_contig00021801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00021801
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containi...   147   9e-34
ref|XP_002305733.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-33
ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containi...   142   4e-32
emb|CBI30711.3| unnamed protein product [Vitis vinifera]              142   4e-32
gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]        142   4e-32

>ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Cucumis sativus]
            gi|449500809|ref|XP_004161200.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  147 bits (371), Expect = 9e-34
 Identities = 67/87 (77%), Positives = 77/87 (88%)
 Frame = +1

Query: 4    KLKYTLVNADERQKETSICGHSEKLAMAFGILNLQHGKTIRVTKNSRVCGDCHEMAKFIS 183
            K  Y L+NADER+KE ++CGHSEKLAMAFG+LNL  GKTIRVTKN RVCGDCHEMAKF+S
Sbjct: 838  KTAYALLNADEREKEVALCGHSEKLAMAFGMLNLPPGKTIRVTKNLRVCGDCHEMAKFMS 897

Query: 184  RNLGREILLRDSNRFHQFKDGSCSCRG 264
            ++  REI+LRDS+RFH FKDGSCSCRG
Sbjct: 898  KSASREIILRDSSRFHHFKDGSCSCRG 924


>ref|XP_002305733.1| predicted protein [Populus trichocarpa] gi|222848697|gb|EEE86244.1|
           predicted protein [Populus trichocarpa]
          Length = 571

 Score =  146 bits (368), Expect = 2e-33
 Identities = 67/87 (77%), Positives = 75/87 (86%)
 Frame = +1

Query: 4   KLKYTLVNADERQKETSICGHSEKLAMAFGILNLQHGKTIRVTKNSRVCGDCHEMAKFIS 183
           K +Y L+NAD  QKET++CGHSEKLAMAFGILNL   +TIRV+KN RVCGDCHEMAKFIS
Sbjct: 483 KTRYALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCGDCHEMAKFIS 542

Query: 184 RNLGREILLRDSNRFHQFKDGSCSCRG 264
           + LGREI+LRDSNRFH FKDG C CRG
Sbjct: 543 KTLGREIVLRDSNRFHHFKDGVCCCRG 569


>ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  142 bits (357), Expect = 4e-32
 Identities = 62/87 (71%), Positives = 77/87 (88%)
 Frame = +1

Query: 4   KLKYTLVNADERQKETSICGHSEKLAMAFGILNLQHGKTIRVTKNSRVCGDCHEMAKFIS 183
           K++Y L+ AD+ +KE ++CGHSEK+AMAFGIL+L  GKT+RVTKN RVCGDCHEMAKF+S
Sbjct: 736 KMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMS 795

Query: 184 RNLGREILLRDSNRFHQFKDGSCSCRG 264
           + + R+I+LRDSNRFH FKDGSCSCRG
Sbjct: 796 KMVKRDIILRDSNRFHHFKDGSCSCRG 822


>emb|CBI30711.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  142 bits (357), Expect = 4e-32
 Identities = 62/87 (71%), Positives = 77/87 (88%)
 Frame = +1

Query: 4   KLKYTLVNADERQKETSICGHSEKLAMAFGILNLQHGKTIRVTKNSRVCGDCHEMAKFIS 183
           K++Y L+ AD+ +KE ++CGHSEK+AMAFGIL+L  GKT+RVTKN RVCGDCHEMAKF+S
Sbjct: 609 KMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMS 668

Query: 184 RNLGREILLRDSNRFHQFKDGSCSCRG 264
           + + R+I+LRDSNRFH FKDGSCSCRG
Sbjct: 669 KMVKRDIILRDSNRFHHFKDGSCSCRG 695


>gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score =  142 bits (357), Expect = 4e-32
 Identities = 66/87 (75%), Positives = 73/87 (83%)
 Frame = +1

Query: 4   KLKYTLVNADERQKETSICGHSEKLAMAFGILNLQHGKTIRVTKNSRVCGDCHEMAKFIS 183
           K KY L+NADE QKE ++CGHSEKLAMAFG+L L   KTIRVTKN RVCGDCHEMAKF+S
Sbjct: 717 KTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMS 776

Query: 184 RNLGREILLRDSNRFHQFKDGSCSCRG 264
           +   REI+LRDSNRFH FKDG CSCRG
Sbjct: 777 KETRREIVLRDSNRFHHFKDGYCSCRG 803


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