BLASTX nr result

ID: Lithospermum22_contig00021794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00021794
         (1273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317171.1| predicted protein [Populus trichocarpa] gi|2...   269   1e-69
ref|XP_002314375.1| predicted protein [Populus trichocarpa] gi|2...   263   7e-68
gb|ADN34247.1| ty3-gypsy retrotransposon protein [Cucumis melo s...   251   3e-64
ref|XP_002314406.1| predicted protein [Populus trichocarpa] gi|2...   248   3e-63
gb|ADN33709.1| retrotransposon gag protein [Cucumis melo subsp. ...   242   2e-61

>ref|XP_002317171.1| predicted protein [Populus trichocarpa] gi|222860236|gb|EEE97783.1|
           predicted protein [Populus trichocarpa]
          Length = 1012

 Score =  269 bits (687), Expect = 1e-69
 Identities = 130/206 (63%), Positives = 162/206 (78%), Gaps = 1/206 (0%)
 Frame = -2

Query: 867 LADGTIPAAQLRKFILGAIKDTPDEAA-PSYSYVKPYSSRIDRLRMPQDYQPPKFQHFDG 691
           + DG     QL++ I  AI D  + +  PSYSY KPY+ RID L+MP  YQPPKFQ FDG
Sbjct: 76  ITDGIFTTNQLKELIKEAITDQVESSIQPSYSYAKPYTQRIDLLKMPLSYQPPKFQQFDG 135

Query: 690 VGNPKQHIAHFIEMYHNAGTSGDHMVKQFVRSLKGNAFKWYTKLEPDSIDSWAELECEFL 511
            GNP+QHIAHF+E  +NAGT+GD MVKQFVRSLKGNAF WYT LE  SID+W +LE EFL
Sbjct: 136 KGNPRQHIAHFVETCNNAGTNGDLMVKQFVRSLKGNAFDWYTDLESCSIDTWEQLEREFL 195

Query: 510 NRFFSTRRTVSMIEFTNAKQRQEKPVTAFINRWRSLSLKCKNRLSES*TINMCIQGMQWD 331
           NRF+ST R VSMIE TNA+Q +E+PV  +I+RWR+LSL C++RL+E+ T++MCIQGM W 
Sbjct: 196 NRFYSTCRVVSMIELTNARQWKEEPVIDYIHRWRNLSLNCRDRLTETSTLDMCIQGMHWG 255

Query: 330 LQYILQDILPKNFEQLSTRAHVMQVS 253
           L+YILQ I PK+FE+L+TRAH M++S
Sbjct: 256 LRYILQGIKPKSFEELATRAHDMELS 281


>ref|XP_002314375.1| predicted protein [Populus trichocarpa] gi|222863415|gb|EEF00546.1|
           predicted protein [Populus trichocarpa]
          Length = 1335

 Score =  263 bits (672), Expect = 7e-68
 Identities = 127/215 (59%), Positives = 163/215 (75%), Gaps = 1/215 (0%)
 Frame = -2

Query: 891 KVVKAPCILADGTIPAAQLRKFILGAIKDTPDEAA-PSYSYVKPYSSRIDRLRMPQDYQP 715
           + VK    + DG     QLR+ I  AI D  + +  PSYSY KPY+ RID L MP  YQP
Sbjct: 186 RAVKNVRSITDGIFTTNQLRELIKKAITDQVESSIQPSYSYAKPYTQRIDLLNMPLSYQP 245

Query: 714 PKFQHFDGVGNPKQHIAHFIEMYHNAGTSGDHMVKQFVRSLKGNAFKWYTKLEPDSIDSW 535
           PKFQ FDG GNP+QH+A+F+E  +N GT+GD MVKQFVRSLKGNAF WYT LE  SID+W
Sbjct: 246 PKFQQFDGKGNPRQHVAYFVETCNNVGTNGDLMVKQFVRSLKGNAFDWYTDLESGSIDTW 305

Query: 534 AELECEFLNRFFSTRRTVSMIEFTNAKQRQEKPVTAFINRWRSLSLKCKNRLSES*TINM 355
            +LE EFLNRF+ST R VS+IE TNA+Q +E+PV  +I+RWR+LSL C++RL+++  ++M
Sbjct: 306 EQLEREFLNRFYSTHRVVSIIELTNARQWKEEPVINYIHRWRNLSLNCRDRLTKTSALDM 365

Query: 354 CIQGMQWDLQYILQDILPKNFEQLSTRAHVMQVSH 250
           CIQGM W L+YILQ I PK+FE+L+TRAH M++S+
Sbjct: 366 CIQGMHWGLRYILQGIKPKSFEELATRAHDMELSN 400


>gb|ADN34247.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 517

 Score =  251 bits (641), Expect = 3e-64
 Identities = 116/177 (65%), Positives = 141/177 (79%)
 Frame = -2

Query: 783 SYSYVKPYSSRIDRLRMPQDYQPPKFQHFDGVGNPKQHIAHFIEMYHNAGTSGDHMVKQF 604
           S+ Y K Y+ RID LRMP  YQPPKFQ FDG GNPKQHIAHF+E   NAG+ GD +VKQF
Sbjct: 188 SFMYSKSYTKRIDNLRMPLGYQPPKFQQFDGRGNPKQHIAHFVETCENAGSRGDQLVKQF 247

Query: 603 VRSLKGNAFKWYTKLEPDSIDSWAELECEFLNRFFSTRRTVSMIEFTNAKQRQEKPVTAF 424
           VRSLKGNAF+WYT LEP+ ID+W +LE EFLNRF+STRR VSM+E TN KQR+ +PV  +
Sbjct: 248 VRSLKGNAFEWYTDLEPEVIDNWEQLEIEFLNRFYSTRRVVSMMELTNTKQRKGEPVIDY 307

Query: 423 INRWRSLSLKCKNRLSES*TINMCIQGMQWDLQYILQDILPKNFEQLSTRAHVMQVS 253
           INRWR+LSL CK++L+E   + MC QGM W+L YILQ I P+ FE+L+TRAH M++S
Sbjct: 308 INRWRALSLDCKDKLTELSAVEMCTQGMHWELLYILQGIKPRTFEELATRAHDMELS 364


>ref|XP_002314406.1| predicted protein [Populus trichocarpa] gi|222863446|gb|EEF00577.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score =  248 bits (632), Expect = 3e-63
 Identities = 117/197 (59%), Positives = 152/197 (77%), Gaps = 1/197 (0%)
 Frame = -2

Query: 840 QLRKFILGAIKDTPDEAA-PSYSYVKPYSSRIDRLRMPQDYQPPKFQHFDGVGNPKQHIA 664
           QL++ I  AI D  + +  PSYSYVK Y+ +ID ++MP  YQPPKFQ F+G GNP+ HIA
Sbjct: 3   QLKELIKEAITDQVESSVQPSYSYVKSYTQQIDLVKMPSSYQPPKFQQFNGNGNPRHHIA 62

Query: 663 HFIEMYHNAGTSGDHMVKQFVRSLKGNAFKWYTKLEPDSIDSWAELECEFLNRFFSTRRT 484
           HF+E  +NA T+GD MVKQFVRSLKGNAF WYT LE   ID+W +LECEFLN F+ TR  
Sbjct: 63  HFVETCNNAKTNGDLMVKQFVRSLKGNAFDWYTDLESGLIDTWEQLECEFLNHFYRTRHV 122

Query: 483 VSMIEFTNAKQRQEKPVTAFINRWRSLSLKCKNRLSES*TINMCIQGMQWDLQYILQDIL 304
           VSMIE TNA+Q  E+PV  +I+RWR+L L C++RL+E+  +++CIQGM W L+YIL+ I 
Sbjct: 123 VSMIELTNARQWNEEPVIDYIHRWRNLGLNCRDRLTETSALDICIQGMYWGLRYILKGIK 182

Query: 303 PKNFEQLSTRAHVMQVS 253
           PK+FE+L+TRAH M++S
Sbjct: 183 PKSFEELATRAHNMELS 199


>gb|ADN33709.1| retrotransposon gag protein [Cucumis melo subsp. melo]
          Length = 576

 Score =  242 bits (617), Expect = 2e-61
 Identities = 112/177 (63%), Positives = 137/177 (77%)
 Frame = -2

Query: 783 SYSYVKPYSSRIDRLRMPQDYQPPKFQHFDGVGNPKQHIAHFIEMYHNAGTSGDHMVKQF 604
           S+ Y KPY+ RID LRMP  YQPPKFQ FDG GNPKQHIAHF+E   NAG+ GD +V+QF
Sbjct: 125 SFMYSKPYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSRGDQLVRQF 184

Query: 603 VRSLKGNAFKWYTKLEPDSIDSWAELECEFLNRFFSTRRTVSMIEFTNAKQRQEKPVTAF 424
           VRSLKGNAF+WYT LEP+  DSW +LE EFLNRF+ST+ TVSM+E T  KQR+   +  +
Sbjct: 185 VRSLKGNAFEWYTDLEPEVTDSWEQLEKEFLNRFYSTKCTVSMMELTTTKQRKGDSIIDY 244

Query: 423 INRWRSLSLKCKNRLSES*TINMCIQGMQWDLQYILQDILPKNFEQLSTRAHVMQVS 253
           INRWR+LSL CK++L+E   + MC QGM W+L YILQ I P+ FE+L+TRAH M+ S
Sbjct: 245 INRWRALSLDCKDKLTELSAVEMCTQGMHWELLYILQGIKPRTFEELATRAHDMESS 301


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