BLASTX nr result

ID: Lithospermum22_contig00021751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00021751
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262...    96   4e-18
ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260...    93   2e-17
emb|CBI37628.3| unnamed protein product [Vitis vinifera]               93   2e-17
ref|XP_002279514.1| PREDICTED: uncharacterized protein LOC100260...    91   1e-16
ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymera...    82   3e-14

>ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262291 [Vitis vinifera]
           gi|296081186|emb|CBI18212.3| unnamed protein product
           [Vitis vinifera]
          Length = 332

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
 Frame = +2

Query: 23  RPPKDDSIDA-RLNSARRRLHENYQEAQNAKKQRTIQVMDIHEIPKPKNSYFPKNKGGFQ 199
           R  KD  +D  +L SARRRLHENYQEAQNAKKQRTIQVMDIH+IPKPKN++F KN+GG Q
Sbjct: 269 REQKDSLVDEEKLASARRRLHENYQEAQNAKKQRTIQVMDIHDIPKPKNTFFAKNRGGVQ 328

Query: 200 RNH 208
             H
Sbjct: 329 AKH 331


>ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260896 isoform 1 [Vitis
           vinifera]
          Length = 331

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 46/71 (64%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
 Frame = +2

Query: 2   ASATPPTRPPKDDSIDA-RLNSARRRLHENYQEAQNAKKQRTIQVMDIHEIPKPKNSYFP 178
           +S+ PP    +D +ID  +  SAR+RLHENYQEAQNAKKQRTIQVMDIH+IPKPKN++F 
Sbjct: 261 SSSFPPPNKQRDTAIDPDKFASARKRLHENYQEAQNAKKQRTIQVMDIHDIPKPKNTFFA 320

Query: 179 KNKGGFQRNHR 211
           K K G Q  HR
Sbjct: 321 KPKVGSQGRHR 331


>emb|CBI37628.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 46/71 (64%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
 Frame = +2

Query: 2   ASATPPTRPPKDDSIDA-RLNSARRRLHENYQEAQNAKKQRTIQVMDIHEIPKPKNSYFP 178
           +S+ PP    +D +ID  +  SAR+RLHENYQEAQNAKKQRTIQVMDIH+IPKPKN++F 
Sbjct: 262 SSSFPPPNKQRDTAIDPDKFASARKRLHENYQEAQNAKKQRTIQVMDIHDIPKPKNTFFA 321

Query: 179 KNKGGFQRNHR 211
           K K G Q  HR
Sbjct: 322 KPKVGSQGRHR 332


>ref|XP_002279514.1| PREDICTED: uncharacterized protein LOC100260896 isoform 2 [Vitis
           vinifera]
          Length = 305

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 45/70 (64%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
 Frame = +2

Query: 5   SATPPTRPPKDDSIDA-RLNSARRRLHENYQEAQNAKKQRTIQVMDIHEIPKPKNSYFPK 181
           +A P  +  +D +ID  +  SAR+RLHENYQEAQNAKKQRTIQVMDIH+IPKPKN++F K
Sbjct: 236 NAEPEPKKQRDTAIDPDKFASARKRLHENYQEAQNAKKQRTIQVMDIHDIPKPKNTFFAK 295

Query: 182 NKGGFQRNHR 211
            K G Q  HR
Sbjct: 296 PKVGSQGRHR 305


>ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c-like [Cucumis sativus]
           gi|449528150|ref|XP_004171069.1| PREDICTED: probable
           mediator of RNA polymerase II transcription subunit
           26c-like [Cucumis sativus]
          Length = 345

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 45/76 (59%), Positives = 56/76 (73%), Gaps = 7/76 (9%)
 Frame = +2

Query: 2   ASATPPTRPP---KDDSIDA-RLNSARRRLHENYQEAQNAKKQRTIQVMDIHEIPKPKNS 169
           +S TP  R     K+ + D+ +L SAR+RL ENY+EA+NAK+QRTIQVMDIHEIPKPKN+
Sbjct: 269 SSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNA 328

Query: 170 YFPKNK---GGFQRNH 208
           +F KNK   GG Q  H
Sbjct: 329 FFSKNKGSGGGSQGRH 344


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