BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00021697
         (1020 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274318.1| PREDICTED: pentatricopeptide repeat-containi...   389   e-106
ref|XP_004140747.1| PREDICTED: pentatricopeptide repeat-containi...   387   e-105
ref|XP_002513638.1| pentatricopeptide repeat-containing protein,...   363   4e-98
ref|XP_002327501.1| predicted protein [Populus trichocarpa] gi|2...   356   6e-96
ref|XP_003548152.1| PREDICTED: pentatricopeptide repeat-containi...   351   2e-94

>ref|XP_002274318.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21190
           [Vitis vinifera] gi|302143769|emb|CBI22630.3| unnamed
           protein product [Vitis vinifera]
          Length = 295

 Score =  389 bits (999), Expect = e-106
 Identities = 197/286 (68%), Positives = 231/286 (80%)
 Frame = -3

Query: 973 MLRFKHFPTIFTKSLPSIASSTNFIKPTIVVCAAKGPRPRYPRVWKANKKIGTISKSVKL 794
           ML  ++ P   T+ L ++    N    +IVVC AKGPRPRYPRVWK  ++IGTISKS KL
Sbjct: 1   MLCLRYSPATITRRLDAVEIPKN--PRSIVVCGAKGPRPRYPRVWKTRQRIGTISKSAKL 58

Query: 793 VECIKELSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKEWKRIIQMTKWMLSKG 614
           V+CIK LSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE++KEWKRIIQ+TKWMLSKG
Sbjct: 59  VDCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEDQKEWKRIIQVTKWMLSKG 118

Query: 613 QGRTMGSYYTLLNALTEDGRLEEAEELWQKLFSDHLESMPRVFFDKMISIYYHKEMHEKM 434
           QGRTMGSY+TLLNAL EDGRL+EAEELW KLFS++LES+PRVF+DKMISIYY ++MHEKM
Sbjct: 119 QGRTMGSYFTLLNALAEDGRLDEAEELWTKLFSENLESLPRVFYDKMISIYYRRDMHEKM 178

Query: 433 FEVFADMEELGIRPTMSIVTKVGDVFNKLGMLDKFQKLKKKYPPPKWEYRYIKGKRVKIR 254
           FE+FADMEELGIRP  SIV  VGDVF KLGMLDK++KL+KKYPPPKWEYRYIKGKRV+IR
Sbjct: 179 FEIFADMEELGIRPNTSIVKMVGDVFQKLGMLDKYEKLQKKYPPPKWEYRYIKGKRVRIR 238

Query: 253 SRDLVKSGEDEINDSHEESDTNPAPSSEITEVCFHEHDNESDKELE 116
           ++    +GE + +    ESD      +EI +    E+ NE   E +
Sbjct: 239 AK---LTGESD-DPGEAESDDPGEAVNEINDKT--ENSNEMHDEAD 278


>ref|XP_004140747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21190-like [Cucumis sativus]
          Length = 331

 Score =  387 bits (995), Expect = e-105
 Identities = 189/259 (72%), Positives = 217/259 (83%), Gaps = 4/259 (1%)
 Frame = -3

Query: 886 VVCAAKGPRPRYPRVWKANKKIGTISKSVKLVECIKELSNVKEEVYGALDSFIAWELEFP 707
           VVCAAKGPRPRYPRVWK  K+IGTISK+ KLV+C+K LSNVKEEVYGALDSFIAWELEFP
Sbjct: 46  VVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFP 105

Query: 706 LITVKKALKTLENEKEWKRIIQMTKWMLSKGQGRTMGSYYTLLNALTEDGRLEEAEELWQ 527
           LITVKKALKTLEN++EWKRIIQ+TKWMLSKGQGRTMGSY+TLLNAL EDGRL+EAEELW 
Sbjct: 106 LITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWN 165

Query: 526 KLFSDHLESMPRVFFDKMISIYYHKEMHEKMFEVFADMEELGIRPTMSIVTKVGDVFNKL 347
           KLFS HLES+PR+FF KMIS+YY + MH+K+FEVFADMEELG++P M+IVTKVG+VF +L
Sbjct: 166 KLFSQHLESIPRIFFHKMISLYYDQAMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQEL 225

Query: 346 GMLDKFQKLKKKYPPPKWEYRYIKGKRVKIRSRDLVKSGEDEINDSH----EESDTNPAP 179
           GMLDK++KL KKYPPPKWEYRYIKGKRVKIR++ L ++G      S     E S TN   
Sbjct: 226 GMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHAKMEHSSTNSID 285

Query: 178 SSEITEVCFHEHDNESDKE 122
            +EIT       D+E   E
Sbjct: 286 EAEITSEDSSLEDDEDMSE 304


>ref|XP_002513638.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547546|gb|EEF49041.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 359

 Score =  363 bits (932), Expect = 4e-98
 Identities = 185/280 (66%), Positives = 218/280 (77%), Gaps = 10/280 (3%)
 Frame = -3

Query: 931 LPSIASSTNFIK----PTIVVCAAKGPRPRYPRVWKANKKIGTISKSVKLVECIKELSNV 764
           LP I++    IK     + VV A KG RPR PRVWK   +IGTISKS KLVECIK LSNV
Sbjct: 42  LPLISTRFEVIKFSKSTSSVVSALKGARPRAPRVWKTKPRIGTISKSAKLVECIKGLSNV 101

Query: 763 KEEVYGALDSFIAWELEFPLITVKKALKTLENEKEWKRIIQMTKWMLSKGQGRTMGSYYT 584
           KEEVYGALDS IAWELEFPLI VKKALKTLENE+EWKRIIQ+ KWMLSKGQGRTMG+Y+T
Sbjct: 102 KEEVYGALDSLIAWELEFPLIAVKKALKTLENEQEWKRIIQVIKWMLSKGQGRTMGTYFT 161

Query: 583 LLNALTEDGRLEEAEELWQKLFSDHLESMPRVFFDKMISIYYHKEMHEKMFEVFADMEEL 404
           LLNAL ED RL+EAEELW KLFSD+LE  PR FFDKMISIYY +EMHEKMFE+FADMEEL
Sbjct: 162 LLNALAEDERLDEAEELWTKLFSDNLEGTPRNFFDKMISIYYKREMHEKMFEIFADMEEL 221

Query: 403 GIRPTMSIVTKVGDVFNKLGMLDKFQKLKKKYPPPKWEYRYIKGKRVKIRSRDLVK--SG 230
           G+RP++SIV  +G VF KLGMLDK++KLKKKYPPPKWEYRYIKGKRV++R++ + +    
Sbjct: 222 GVRPSVSIVNMMGSVFQKLGMLDKYRKLKKKYPPPKWEYRYIKGKRVRLRAKQVNEFLGA 281

Query: 229 EDEINDSHE----ESDTNPAPSSEITEVCFHEHDNESDKE 122
            + +N + E     +  N   ++++ E    E  NE D+E
Sbjct: 282 NESVNQNAETPYISNKLNEEDNTKLNEANVEEDLNELDEE 321


>ref|XP_002327501.1| predicted protein [Populus trichocarpa] gi|222836055|gb|EEE74476.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score =  356 bits (913), Expect = 6e-96
 Identities = 162/219 (73%), Positives = 198/219 (90%)
 Frame = -3

Query: 883 VCAAKGPRPRYPRVWKANKKIGTISKSVKLVECIKELSNVKEEVYGALDSFIAWELEFPL 704
           VCAAKGPRPRYPRVWK  ++IGTISKS KLV+CIK LSNVKEEVYGALDSF+AWELEFPL
Sbjct: 1   VCAAKGPRPRYPRVWKTKRRIGTISKSAKLVDCIKGLSNVKEEVYGALDSFVAWELEFPL 60

Query: 703 ITVKKALKTLENEKEWKRIIQMTKWMLSKGQGRTMGSYYTLLNALTEDGRLEEAEELWQK 524
           I VKKAL+ LE ++EWKRIIQ+TKWMLSKGQGRTMG+Y+TL+NAL EDGRL+E EELW K
Sbjct: 61  IAVKKALRALEEQQEWKRIIQVTKWMLSKGQGRTMGTYFTLMNALAEDGRLDEVEELWTK 120

Query: 523 LFSDHLESMPRVFFDKMISIYYHKEMHEKMFEVFADMEELGIRPTMSIVTKVGDVFNKLG 344
           LFS +LE  PR+ FDKMISIYY ++MH+++FE+FADMEELG+RP++SIV  VG+VF +LG
Sbjct: 121 LFSQYLEGTPRMMFDKMISIYYKRDMHDQIFEIFADMEELGLRPSVSIVNMVGNVFQRLG 180

Query: 343 MLDKFQKLKKKYPPPKWEYRYIKGKRVKIRSRDLVKSGE 227
           M+DK++KLKKKYPPPKW YRYIKGKRV++R+++  ++G+
Sbjct: 181 MMDKYEKLKKKYPPPKWIYRYIKGKRVRVRAKNDNEAGD 219


>ref|XP_003548152.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21190-like [Glycine max]
          Length = 343

 Score =  351 bits (900), Expect = 2e-94
 Identities = 172/271 (63%), Positives = 216/271 (79%)
 Frame = -3

Query: 973 MLRFKHFPTIFTKSLPSIASSTNFIKPTIVVCAAKGPRPRYPRVWKANKKIGTISKSVKL 794
           ML     P +  K+  +I   T+      V+CAAKG RPRYPRVWK +KKIGTISK+ KL
Sbjct: 1   MLALTDSPLLIAKTFEAIKIPTS--TRGTVLCAAKGQRPRYPRVWKTHKKIGTISKAAKL 58

Query: 793 VECIKELSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKEWKRIIQMTKWMLSKG 614
           V  IKELSNVKEEVYGALDS++AWELEFPLITVKKALKTLE+E+EWKR+IQ+TKWMLSKG
Sbjct: 59  VNSIKELSNVKEEVYGALDSYVAWELEFPLITVKKALKTLESEQEWKRVIQVTKWMLSKG 118

Query: 613 QGRTMGSYYTLLNALTEDGRLEEAEELWQKLFSDHLESMPRVFFDKMISIYYHKEMHEKM 434
           QG+TMGSY+TLLNAL ED RL+EAEELW KL   ++ES+PR FFDKMISIY+ + MHEKM
Sbjct: 119 QGKTMGSYFTLLNALVEDDRLDEAEELWTKLLMQYMESLPRRFFDKMISIYHKRGMHEKM 178

Query: 433 FEVFADMEELGIRPTMSIVTKVGDVFNKLGMLDKFQKLKKKYPPPKWEYRYIKGKRVKIR 254
           FE+FADMEEL +RP +++V+ +GD F +LGMLDK+QKL  KYPPP+WEYRYI+GKRVK++
Sbjct: 179 FEIFADMEELCLRPNIAVVSMIGDAFKELGMLDKYQKLHAKYPPPQWEYRYIRGKRVKVK 238

Query: 253 SRDLVKSGEDEINDSHEESDTNPAPSSEITE 161
               V+   +++N ++ E   N  P+S++ +
Sbjct: 239 ----VEVQSNQVN-TYIERHGNVEPNSDLNK 264