BLASTX nr result

ID: Lithospermum22_contig00021660 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00021660
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313503.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_004140266.1| PREDICTED: E3 ubiquitin-protein ligase PUB22...   117   1e-24
ref|XP_002275500.2| PREDICTED: E3 ubiquitin-protein ligase PUB23...   115   4e-24
emb|CBI24432.3| unnamed protein product [Vitis vinifera]              115   4e-24
ref|XP_002298264.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24

>ref|XP_002313503.1| predicted protein [Populus trichocarpa] gi|222849911|gb|EEE87458.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/75 (74%), Positives = 68/75 (90%)
 Frame = -1

Query: 308 RAVRLLLSISKFSASARVLQEMLQVGVVAKLCLVLQVDSGLKTKERTKEILKLHSRVWRE 129
           +AVR+L SI +FSA++RVLQEMLQVGVVAKLCLVLQVDS  K+KER +EILKLHSRVWR 
Sbjct: 341 KAVRILYSICRFSATSRVLQEMLQVGVVAKLCLVLQVDSSFKSKERAREILKLHSRVWRN 400

Query: 128 SSCIPPHLLSSYPST 84
           S+C+P +L+SSYPS+
Sbjct: 401 SACVPAYLMSSYPSS 415


>ref|XP_004140266.1| PREDICTED: E3 ubiquitin-protein ligase PUB22-like [Cucumis sativus]
           gi|449481188|ref|XP_004156108.1| PREDICTED: E3
           ubiquitin-protein ligase PUB22-like [Cucumis sativus]
          Length = 412

 Score =  117 bits (292), Expect = 1e-24
 Identities = 55/75 (73%), Positives = 67/75 (89%)
 Frame = -1

Query: 308 RAVRLLLSISKFSASARVLQEMLQVGVVAKLCLVLQVDSGLKTKERTKEILKLHSRVWRE 129
           RAVR+L SI +FSASA+V+QEML+VGVVAKLCLVLQ+D  +KT+E+ ++ LKLHSRVW  
Sbjct: 338 RAVRILSSICRFSASAKVMQEMLEVGVVAKLCLVLQMDCSMKTREKARDTLKLHSRVWSN 397

Query: 128 SSCIPPHLLSSYPST 84
           SSCIPPHLLS+YPST
Sbjct: 398 SSCIPPHLLSAYPST 412


>ref|XP_002275500.2| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Vitis vinifera]
          Length = 414

 Score =  115 bits (288), Expect = 4e-24
 Identities = 56/75 (74%), Positives = 66/75 (88%)
 Frame = -1

Query: 308 RAVRLLLSISKFSASARVLQEMLQVGVVAKLCLVLQVDSGLKTKERTKEILKLHSRVWRE 129
           RAV++L S+SKFSA++RVLQEMLQVGVV+KLCLVLQVDS  KTKE+T+EIL LHSRVW+ 
Sbjct: 340 RAVKILASVSKFSATSRVLQEMLQVGVVSKLCLVLQVDSSKKTKEKTREILNLHSRVWKN 399

Query: 128 SSCIPPHLLSSYPST 84
            SCIP  L SSYPS+
Sbjct: 400 PSCIPARLFSSYPSS 414


>emb|CBI24432.3| unnamed protein product [Vitis vinifera]
          Length = 367

 Score =  115 bits (288), Expect = 4e-24
 Identities = 56/75 (74%), Positives = 66/75 (88%)
 Frame = -1

Query: 308 RAVRLLLSISKFSASARVLQEMLQVGVVAKLCLVLQVDSGLKTKERTKEILKLHSRVWRE 129
           RAV++L S+SKFSA++RVLQEMLQVGVV+KLCLVLQVDS  KTKE+T+EIL LHSRVW+ 
Sbjct: 293 RAVKILASVSKFSATSRVLQEMLQVGVVSKLCLVLQVDSSKKTKEKTREILNLHSRVWKN 352

Query: 128 SSCIPPHLLSSYPST 84
            SCIP  L SSYPS+
Sbjct: 353 PSCIPARLFSSYPSS 367


>ref|XP_002298264.1| predicted protein [Populus trichocarpa] gi|222845522|gb|EEE83069.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score =  115 bits (287), Expect = 5e-24
 Identities = 54/75 (72%), Positives = 68/75 (90%)
 Frame = -1

Query: 308 RAVRLLLSISKFSASARVLQEMLQVGVVAKLCLVLQVDSGLKTKERTKEILKLHSRVWRE 129
           +AVR+L SI +FSA++RVLQEMLQVG VAKLCL+LQVDS LK+KER +EILK+HS+VWR 
Sbjct: 341 KAVRILCSICRFSATSRVLQEMLQVGAVAKLCLILQVDSSLKSKERAREILKVHSKVWRS 400

Query: 128 SSCIPPHLLSSYPST 84
           S+CIP +L+SSYPS+
Sbjct: 401 SACIPAYLMSSYPSS 415


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