BLASTX nr result

ID: Lithospermum22_contig00021654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00021654
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGE10595.1| 4-coumarate CoA ligase [Lonicera japonica]             129   2e-28
gb|AGE10622.1| 4-coumarate CoA ligase, partial [Lonicera macrant...   117   1e-24
ref|XP_002327954.1| 4-coumarate-coa ligase [Populus trichocarpa]...   116   2e-24
gb|ADN33954.1| 4-coumarate-CoA ligase [Cucumis melo subsp. melo]      114   6e-24
emb|CBI40068.3| unnamed protein product [Vitis vinifera]              114   1e-23

>gb|AGE10595.1| 4-coumarate CoA ligase [Lonicera japonica]
          Length = 540

 Score =  129 bits (324), Expect = 2e-28
 Identities = 68/104 (65%), Positives = 82/104 (78%)
 Frame = +2

Query: 2   SYTQLIQQVTNLSSSLQTHLNLTQNHVAFILSHNIIQLPILFLSLLSIGVIISPSNPLSS 181
           SY+Q   Q  NLSSSLQ+HL L++  VAFILS N +Q+P+L+ SLLS+GVIISPSNP S+
Sbjct: 64  SYSQFTTQTNNLSSSLQSHLGLSKGDVAFILSLNSLQIPLLYFSLLSLGVIISPSNPSST 123

Query: 182 NYEISRQILLSKPVIAFATSEAACKVPKLEYGTVVIDSLEFESM 313
             EISRQI LSKPVIAFATS  + K+P L +GTV+IDS EF SM
Sbjct: 124 ESEISRQIKLSKPVIAFATSATSHKIPALRHGTVLIDSPEFVSM 167


>gb|AGE10622.1| 4-coumarate CoA ligase, partial [Lonicera macranthoides]
          Length = 162

 Score =  117 bits (292), Expect = 1e-24
 Identities = 61/96 (63%), Positives = 75/96 (78%)
 Frame = +2

Query: 2   SYTQLIQQVTNLSSSLQTHLNLTQNHVAFILSHNIIQLPILFLSLLSIGVIISPSNPLSS 181
           SY+Q   Q  NLSSSLQ+ L L++  VAFILS N +Q+P+L+ SLLS+GVIISPSNP S+
Sbjct: 67  SYSQFTTQTNNLSSSLQSRLGLSKGDVAFILSPNSLQIPLLYFSLLSLGVIISPSNPSST 126

Query: 182 NYEISRQILLSKPVIAFATSEAACKVPKLEYGTVVI 289
             EISRQI LSKPVIAFATS  + K+P L +GTV+I
Sbjct: 127 ESEISRQIKLSKPVIAFATSATSHKIPALRHGTVLI 162


>ref|XP_002327954.1| 4-coumarate-coa ligase [Populus trichocarpa]
           gi|224133074|ref|XP_002327955.1| acyl:coa ligase
           [Populus trichocarpa] gi|222837363|gb|EEE75742.1|
           4-coumarate-coa ligase [Populus trichocarpa]
           gi|222837364|gb|EEE75743.1| acyl:coa ligase [Populus
           trichocarpa]
          Length = 548

 Score =  116 bits (290), Expect = 2e-24
 Identities = 60/119 (50%), Positives = 84/119 (70%)
 Frame = +2

Query: 2   SYTQLIQQVTNLSSSLQTHLNLTQNHVAFILSHNIIQLPILFLSLLSIGVIISPSNPLSS 181
           SY+  I+++ +L+  LQ    L +N  AFIL  N IQ+PIL+ SLLS+GV+ISP+NP+S+
Sbjct: 70  SYSDFIERIKSLTLYLQNVTQLRKNDTAFILCPNSIQVPILYFSLLSLGVVISPANPIST 129

Query: 182 NYEISRQILLSKPVIAFATSEAACKVPKLEYGTVVIDSLEFESMMMTRPNNGRANQNYE 358
             EIS QI LS PVIAFA S+   K+PKL++GT++IDS EF+S++   P    A Q+ E
Sbjct: 130 ESEISHQISLSNPVIAFAISKTCHKLPKLKHGTILIDSPEFDSIITMSPATTTARQDLE 188


>gb|ADN33954.1| 4-coumarate-CoA ligase [Cucumis melo subsp. melo]
          Length = 1055

 Score =  114 bits (286), Expect = 6e-24
 Identities = 57/105 (54%), Positives = 79/105 (75%)
 Frame = +2

Query: 2   SYTQLIQQVTNLSSSLQTHLNLTQNHVAFILSHNIIQLPILFLSLLSIGVIISPSNPLSS 181
           SY   ++Q+ NL+S+L++  +L   HVAFIL+   +Q+P+L+ +LLS+GV++SP+NP SS
Sbjct: 562 SYAIFLRQIRNLASNLKSLTSLCNGHVAFILAPTSLQIPVLYFALLSLGVVLSPANPTSS 621

Query: 182 NYEISRQILLSKPVIAFATSEAACKVPKLEYGTVVIDSLEFESMM 316
             EIS QI LSKPVIAFATS  A K+P L +GTV+IDS  F SM+
Sbjct: 622 VSEISHQIQLSKPVIAFATSSTASKLPTLRFGTVIIDSPHFLSML 666



 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/105 (50%), Positives = 77/105 (73%)
 Frame = +2

Query: 2   SYTQLIQQVTNLSSSLQTHLNLTQNHVAFILSHNIIQLPILFLSLLSIGVIISPSNPLSS 181
           SY   ++Q+ NL+S+L+   + +   VAFILS   +Q+P+L+ +LLS+GV++SP+NP+SS
Sbjct: 67  SYALFLRQIRNLTSNLKALYSFSNGQVAFILSPTSLQIPVLYFALLSLGVVVSPANPISS 126

Query: 182 NYEISRQILLSKPVIAFATSEAACKVPKLEYGTVVIDSLEFESMM 316
             EI+ Q+ L KPVIAFA S  A K+P+L  GTV+IDS EF S+M
Sbjct: 127 ESEIAHQVSLCKPVIAFAISSTASKIPRLPLGTVLIDSPEFLSLM 171


>emb|CBI40068.3| unnamed protein product [Vitis vinifera]
          Length = 565

 Score =  114 bits (284), Expect = 1e-23
 Identities = 53/109 (48%), Positives = 83/109 (76%)
 Frame = +2

Query: 2   SYTQLIQQVTNLSSSLQTHLNLTQNHVAFILSHNIIQLPILFLSLLSIGVIISPSNPLSS 181
           SY++ +++   L++ LQ+ + L +   A+ILS+N+IQ+P+L+ +LLS+GV++SP+NP+++
Sbjct: 119 SYSEFVRRSKTLAAYLQSIVGLNKGDAAYILSNNLIQVPVLYFALLSLGVVVSPANPINT 178

Query: 182 NYEISRQILLSKPVIAFATSEAACKVPKLEYGTVVIDSLEFESMMMTRP 328
             E++RQ  L +PVIAF  S A  K+PKL YGT+VIDS EFE +MMT P
Sbjct: 179 KAEVARQTQLCRPVIAFTISTAVHKIPKLRYGTIVIDSFEFE-LMMTSP 226


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