BLASTX nr result

ID: Lithospermum22_contig00021618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00021618
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628497.1| NADH dehydrogenase subunit F [Medicago trunc...    82   5e-14
ref|XP_002518611.1| conserved hypothetical protein [Ricinus comm...    58   4e-12
ref|XP_003588284.1| hypothetical protein MTR_1g005250 [Medicago ...    73   3e-11
emb|CAN61461.1| hypothetical protein VITISV_029800 [Vitis vinifera]    58   9e-07

>ref|XP_003628497.1| NADH dehydrogenase subunit F [Medicago truncatula]
           gi|355522519|gb|AET02973.1| NADH dehydrogenase subunit F
           [Medicago truncatula]
          Length = 187

 Score = 82.4 bits (202), Expect = 5e-14
 Identities = 45/56 (80%), Positives = 46/56 (82%), Gaps = 1/56 (1%)
 Frame = -1

Query: 562 VRSGPWSSVSGLPAAAKIYEIDQPAGLVWLFFSIE-KESAVCASHLLLGSLDDTAF 398
           +RSGPWSSVSG PA  KI EIDQPAGLVWLF SIE KESAVCASHLLLGS    AF
Sbjct: 29  IRSGPWSSVSGFPAD-KISEIDQPAGLVWLFLSIEKKESAVCASHLLLGSAGRHAF 83


>ref|XP_002518611.1| conserved hypothetical protein [Ricinus communis]
           gi|223542210|gb|EEF43753.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 60

 Score = 58.2 bits (139), Expect(2) = 4e-12
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = -3

Query: 233 HIQSYRHGPTDLFSIGASSSATRFYLTKP 147
           HIQSYRH PTDLFSIGASSS T+FYLTKP
Sbjct: 2   HIQSYRHSPTDLFSIGASSSTTQFYLTKP 30



 Score = 38.1 bits (87), Expect(2) = 4e-12
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = -2

Query: 114 NSLFDNKAETPDPTLISFE 58
           NSLFDNKAETPD T ISFE
Sbjct: 42  NSLFDNKAETPDQTFISFE 60


>ref|XP_003588284.1| hypothetical protein MTR_1g005250 [Medicago truncatula]
           gi|355477332|gb|AES58535.1| hypothetical protein
           MTR_1g005250 [Medicago truncatula]
          Length = 197

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 42/80 (52%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
 Frame = -3

Query: 383 AGRTCDGSQGSNMTT*VYVATILFYG-SGRTXXXXXXXXXXXXXXXFTFLTHIQSYRHGP 207
           AGRTCDGS  SN+   + +    ++                      TFLTHI SYRHGP
Sbjct: 88  AGRTCDGSPRSNIYDHLGLRCHDYFSMEAGGLLEVRPGFFGVVGEGLTFLTHIHSYRHGP 147

Query: 206 TDLFSIGASSSATRFYLTKP 147
           TDLFSIGASSSATRFYLTKP
Sbjct: 148 TDLFSIGASSSATRFYLTKP 167



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 49/99 (49%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
 Frame = -1

Query: 562 VRSGPWSSVSGLPAAAKIYEIDQPAGLVWLFFSIE-KESAVCASHLLLGSLDDTAFSFQY 386
           +RSGPWSSVSGLPA  KI EIDQPAGLVWLF SIE KESAVCA     GS     +    
Sbjct: 47  IRSGPWSSVSGLPAD-KISEIDQPAGLVWLFLSIEKKESAVCAGRTCDGSPRSNIYDH-- 103

Query: 385 RPAVLVMVPKDPI*PLRSTLPRYCSMEAGGQFRSSARFF 269
                          L      Y SMEAGG       FF
Sbjct: 104 ---------------LGLRCHDYFSMEAGGLLEVRPGFF 127



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 43/98 (43%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
 Frame = -2

Query: 348 YDHLGLRCHDIVLWKRADSLEVRPGFFWCRRGGI-YLSNAYSVVPAWPH*FVFDRSIKQR 172
           YDHLGLRCHD    +    LEVRPGFF     G+ +L++ +S        F    S    
Sbjct: 101 YDHLGLRCHDYFSMEAGGLLEVRPGFFGVVGEGLTFLTHIHSYRHGPTDLFSIGAS-SSA 159

Query: 171 NPVLLDXXXXXXXXXXXXPNSLFDNKAETPDPTLISFE 58
               L             PNSLFDNKAETPDPT ISFE
Sbjct: 160 TRFYLTKPRARPRREFALPNSLFDNKAETPDPTFISFE 197


>emb|CAN61461.1| hypothetical protein VITISV_029800 [Vitis vinifera]
          Length = 124

 Score = 58.2 bits (139), Expect = 9e-07
 Identities = 29/48 (60%), Positives = 31/48 (64%)
 Frame = -3

Query: 224 SYRHGPTDLFSIGASSSATRFYLTKPVLLQGGSLLDPTPFLITRQKPP 81
           SYRHGPTDLFSIGASSSATRFYLTKP          P P    + + P
Sbjct: 69  SYRHGPTDLFSIGASSSATRFYLTKPRARPRREFALPNPLFDNKAESP 116


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