BLASTX nr result

ID: Lithospermum22_contig00021602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00021602
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30307.3| unnamed protein product [Vitis vinifera]              149   4e-34
ref|XP_002276489.1| PREDICTED: ABC transporter B family member 2...   149   4e-34
ref|NP_196011.1| ABC transporter B family member 29 [Arabidopsis...   144   2e-32
ref|XP_002873123.1| hypothetical protein ARALYDRAFT_487170 [Arab...   143   3e-32
ref|XP_004149200.1| PREDICTED: ABC transporter B family member 2...   135   7e-30

>emb|CBI30307.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  149 bits (376), Expect = 4e-34
 Identities = 82/196 (41%), Positives = 108/196 (55%)
 Frame = -3

Query: 590 LKPYLQPQLHPXXXXXXXXXXXXXXXXXXIPKISSLTSILNTPNPTKFHHECLLLGILVL 411
           +KPY+  +  P                  +PK+   ++ L+  +      E L+LG+L+L
Sbjct: 157 IKPYVLSEYKPILKGWFCSLVSVYSLSKIVPKVGKFSATLSKIDAIHLRDEGLVLGVLLL 216

Query: 410 IRQIGVYLQQAFLWEAALNCAFNIRVDVFQKVLERDLGFFEGGEGVNSGDIAYRFTAEAA 231
            R +  Y QQAFLW+AALN  + +RV  F KVL+RDL FFEGG+ V+ GDIAYR TAEA+
Sbjct: 217 ARLVASYWQQAFLWDAALNSVYKVRVFAFDKVLQRDLEFFEGGDAVSPGDIAYRMTAEAS 276

Query: 230 DVADTVYHLLNAVGPCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFINGHLGEKLRKIS 51
           DVADTV+ LLN + P                              + +  HLGE+LRKIS
Sbjct: 277 DVADTVHALLNTIVPSALQLSAMATQMLFISPTLSLISALVIPFMSLVIAHLGERLRKIS 336

Query: 50  NRAHLSVATLSAYLNE 3
            RAHLS+A LSAYLNE
Sbjct: 337 KRAHLSIAALSAYLNE 352


>ref|XP_002276489.1| PREDICTED: ABC transporter B family member 29, chloroplastic [Vitis
           vinifera]
          Length = 630

 Score =  149 bits (376), Expect = 4e-34
 Identities = 82/196 (41%), Positives = 108/196 (55%)
 Frame = -3

Query: 590 LKPYLQPQLHPXXXXXXXXXXXXXXXXXXIPKISSLTSILNTPNPTKFHHECLLLGILVL 411
           +KPY+  +  P                  +PK+   ++ L+  +      E L+LG+L+L
Sbjct: 63  IKPYVLSEYKPILKGWFCSLVSVYSLSKIVPKVGKFSATLSKIDAIHLRDEGLVLGVLLL 122

Query: 410 IRQIGVYLQQAFLWEAALNCAFNIRVDVFQKVLERDLGFFEGGEGVNSGDIAYRFTAEAA 231
            R +  Y QQAFLW+AALN  + +RV  F KVL+RDL FFEGG+ V+ GDIAYR TAEA+
Sbjct: 123 ARLVASYWQQAFLWDAALNSVYKVRVFAFDKVLQRDLEFFEGGDAVSPGDIAYRMTAEAS 182

Query: 230 DVADTVYHLLNAVGPCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFINGHLGEKLRKIS 51
           DVADTV+ LLN + P                              + +  HLGE+LRKIS
Sbjct: 183 DVADTVHALLNTIVPSALQLSAMATQMLFISPTLSLISALVIPFMSLVIAHLGERLRKIS 242

Query: 50  NRAHLSVATLSAYLNE 3
            RAHLS+A LSAYLNE
Sbjct: 243 KRAHLSIAALSAYLNE 258


>ref|NP_196011.1| ABC transporter B family member 29 [Arabidopsis thaliana]
           gi|75335698|sp|Q9LZB8.1|AB29B_ARATH RecName: Full=ABC
           transporter B family member 29, chloroplastic; Short=ABC
           transporter ABCB.29; Short=AtABCB29; AltName: Full=ABC2
           homolog 12; Flags: Precursor gi|7406401|emb|CAB85511.1|
           ABC transporter-like protein [Arabidopsis thaliana]
           gi|16604565|gb|AAL24084.1| putative ABC transporter
           protein [Arabidopsis thaliana]
           gi|20259177|gb|AAM14304.1| putative ABC transporter
           [Arabidopsis thaliana] gi|332003288|gb|AED90671.1| ABC
           transporter B family member 29 [Arabidopsis thaliana]
          Length = 634

 Score =  144 bits (362), Expect = 2e-32
 Identities = 84/198 (42%), Positives = 110/198 (55%), Gaps = 2/198 (1%)
 Frame = -3

Query: 590 LKPYLQPQLHPXXXXXXXXXXXXXXXXXXIPKISSLTSILNT--PNPTKFHHECLLLGIL 417
           +KPYLQ +                     +P++ S TS LN    + TK   ECL+L  L
Sbjct: 65  IKPYLQSESKTVLLGWLCSCVSVVSLSQIVPRLGSFTSNLNANAASLTKLKGECLVLAGL 124

Query: 416 VLIRQIGVYLQQAFLWEAALNCAFNIRVDVFQKVLERDLGFFEGGEGVNSGDIAYRFTAE 237
           VL + +  YLQQAFLWEAALN  + IRV  +++VLER+L FFEGG G++SGDIAYR TAE
Sbjct: 125 VLAKVVAYYLQQAFLWEAALNTVYKIRVFAYRRVLERELEFFEGGNGISSGDIAYRITAE 184

Query: 236 AADVADTVYHLLNAVGPCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFINGHLGEKLRK 57
           A++VADT+Y LLN V P                              A +  +LG++LRK
Sbjct: 185 ASEVADTIYALLNTVVPSAIQISVMTAHMIVASPALTLVSAMVIPSVALLIAYLGDRLRK 244

Query: 56  ISNRAHLSVATLSAYLNE 3
           IS +A ++ A LS YLNE
Sbjct: 245 ISRKAQIASAQLSTYLNE 262


>ref|XP_002873123.1| hypothetical protein ARALYDRAFT_487170 [Arabidopsis lyrata subsp.
           lyrata] gi|297318960|gb|EFH49382.1| hypothetical protein
           ARALYDRAFT_487170 [Arabidopsis lyrata subsp. lyrata]
          Length = 635

 Score =  143 bits (360), Expect = 3e-32
 Identities = 83/198 (41%), Positives = 109/198 (55%), Gaps = 2/198 (1%)
 Frame = -3

Query: 590 LKPYLQPQLHPXXXXXXXXXXXXXXXXXXIPKISSLTSILNTPNPT--KFHHECLLLGIL 417
           +KPYLQ +                     +P++ S TS LN    +  K   ECL+L  L
Sbjct: 66  VKPYLQSESKTILLGWLCSCVSVVSLSQIVPRLGSFTSSLNANAASLMKLKGECLVLAGL 125

Query: 416 VLIRQIGVYLQQAFLWEAALNCAFNIRVDVFQKVLERDLGFFEGGEGVNSGDIAYRFTAE 237
           VL + +  YLQQAFLWEAALN  + IRV  +++VLER+L FFEGG G++SGDIAYR TAE
Sbjct: 126 VLAKVVAYYLQQAFLWEAALNTVYKIRVFAYRRVLERELDFFEGGNGISSGDIAYRITAE 185

Query: 236 AADVADTVYHLLNAVGPCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFINGHLGEKLRK 57
           A++VADT+Y LLN V P                              A +  +LG++LRK
Sbjct: 186 ASEVADTIYALLNTVVPSAIQIFVMTAHMIVASPALTLVSAMVIPSVALLTAYLGDRLRK 245

Query: 56  ISNRAHLSVATLSAYLNE 3
           IS +A ++ A LS YLNE
Sbjct: 246 ISRKAQIASAQLSTYLNE 263


>ref|XP_004149200.1| PREDICTED: ABC transporter B family member 29, chloroplastic-like
           [Cucumis sativus] gi|449522662|ref|XP_004168345.1|
           PREDICTED: ABC transporter B family member 29,
           chloroplastic-like [Cucumis sativus]
          Length = 643

 Score =  135 bits (340), Expect = 7e-30
 Identities = 75/166 (45%), Positives = 97/166 (58%)
 Frame = -3

Query: 500 PKISSLTSILNTPNPTKFHHECLLLGILVLIRQIGVYLQQAFLWEAALNCAFNIRVDVFQ 321
           PKI   +SI++  +  K   + L+LG LV  R +  Y Q+AF+W+AALN  + IR+ VF+
Sbjct: 108 PKIGKFSSIIDKVDAIKLWDQSLVLGSLVFARFVASYCQEAFIWDAALNAIYEIRLRVFE 167

Query: 320 KVLERDLGFFEGGEGVNSGDIAYRFTAEAADVADTVYHLLNAVGPCXXXXXXXXXXXXXX 141
           +VL  DL FFEGG GV+SGDIAYR TAEA+DVADTVY LLN V P               
Sbjct: 168 RVLAMDLDFFEGGTGVSSGDIAYRITAEASDVADTVYSLLNTVVPSMLQLSAMATQMLAI 227

Query: 140 XXXXXXXXXXXXXXXAFINGHLGEKLRKISNRAHLSVATLSAYLNE 3
                          A +  +LGE+  +IS  A LS+A LS+YLNE
Sbjct: 228 SPVLSLISALVIPCVALVIAYLGERQHRISKMASLSIANLSSYLNE 273


Top