BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00021589
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624580.1| Pentatricopeptide repeat-containing protein ...   117   1e-24
ref|XP_004133786.1| PREDICTED: pentatricopeptide repeat-containi...   114   1e-23
ref|XP_002319139.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|XP_002525469.1| pentatricopeptide repeat-containing protein,...   111   5e-23
ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containi...   109   2e-22

>ref|XP_003624580.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499595|gb|AES80798.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  117 bits (293), Expect = 1e-24
 Identities = 61/116 (52%), Positives = 82/116 (70%), Gaps = 9/116 (7%)
 Frame = +2

Query: 2   EDGLDDADEESDVL--------RDVERIVGIFRNPLTSMAQASLE-ELGDVKVKREVVCE 154
           +DG DD D+ S  L        +DV+ I+ I   P +   +   + E  +VK   E+V E
Sbjct: 77  DDGDDDHDKNSSQLHLRDDGFVKDVKTILDIIHKPGSGPYEIKQKLEDCNVKASSELVVE 136

Query: 155 VLSRLRNDWEAAYTFFLWAGKQPGHEHSVRELHSMIAILGKMRKFDTALSIIDEMR 322
           VLSR+RNDWEAA+TFFLWAGKQPG++HSVRE HSMI++LGKMR+FDTA ++++EMR
Sbjct: 137 VLSRVRNDWEAAFTFFLWAGKQPGYDHSVREYHSMISVLGKMRRFDTAWALVEEMR 192


>ref|XP_004133786.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Cucumis sativus]
           gi|449477985|ref|XP_004155184.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Cucumis sativus]
          Length = 485

 Score =  114 bits (284), Expect = 1e-23
 Identities = 58/100 (58%), Positives = 74/100 (74%), Gaps = 2/100 (2%)
 Frame = +2

Query: 29  ESDVLRDVERIVGIFRN--PLTSMAQASLEELGDVKVKREVVCEVLSRLRNDWEAAYTFF 202
           +  V++DV+ I+ IFR       +   +  E   +KV  E+V  VLSR+RNDWEAA+TFF
Sbjct: 5   DKGVIKDVDAIMDIFRGFRDANRIQVRNKLEHCFIKVSGELVVAVLSRIRNDWEAAFTFF 64

Query: 203 LWAGKQPGHEHSVRELHSMIAILGKMRKFDTALSIIDEMR 322
           +WAGKQPG+ HSVRE HSMI+ILGKMRKFDTA ++IDEMR
Sbjct: 65  VWAGKQPGYAHSVREYHSMISILGKMRKFDTAWALIDEMR 104


>ref|XP_002319139.1| predicted protein [Populus trichocarpa] gi|222857515|gb|EEE95062.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  114 bits (284), Expect = 1e-23
 Identities = 60/115 (52%), Positives = 80/115 (69%), Gaps = 12/115 (10%)
 Frame = +2

Query: 14  DDADEESDV----------LRDVERIVGIFRNPLTSMAQ--ASLEELGDVKVKREVVCEV 157
           +D D++ DV           +D + IV I +    +  +  + +E+ G +KV +E+V EV
Sbjct: 3   NDDDDDDDVRGLNLSDDGLFQDAKTIVNILQESCDNRVEMKSKIEQCG-IKVSQELVLEV 61

Query: 158 LSRLRNDWEAAYTFFLWAGKQPGHEHSVRELHSMIAILGKMRKFDTALSIIDEMR 322
           LSR+RNDWEAA+TFFLWA +QPG+ HSVRE HSMI+ILGKMRKFDTA  +IDEMR
Sbjct: 62  LSRVRNDWEAAFTFFLWAARQPGYAHSVREYHSMISILGKMRKFDTAWVLIDEMR 116


>ref|XP_002525469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535282|gb|EEF36959.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 581

 Score =  111 bits (278), Expect = 5e-23
 Identities = 63/120 (52%), Positives = 82/120 (68%), Gaps = 14/120 (11%)
 Frame = +2

Query: 5   DGLDDADEESDV----------LRDVERIVGIFR----NPLTSMAQASLEELGDVKVKRE 142
           D  DD D++ ++          ++DV  I+ I      NP+    +  +E  G VKV RE
Sbjct: 72  DVSDDDDDDDNIRQLNLKDEGLVQDVTIIMSILHQLSGNPVEM--KNKIEHCG-VKVSRE 128

Query: 143 VVCEVLSRLRNDWEAAYTFFLWAGKQPGHEHSVRELHSMIAILGKMRKFDTALSIIDEMR 322
           +V EVLSR+RNDWEAA+TFFLWAG+Q G+ HSVRE H+MI+ILGKMRKFDTA ++IDEMR
Sbjct: 129 LVLEVLSRIRNDWEAAFTFFLWAGRQLGYSHSVREYHAMISILGKMRKFDTAWALIDEMR 188


>ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Vitis vinifera]
          Length = 566

 Score =  109 bits (273), Expect = 2e-22
 Identities = 58/93 (62%), Positives = 70/93 (75%), Gaps = 2/93 (2%)
 Frame = +2

Query: 50  VERIVGIFRNPLTSMA--QASLEELGDVKVKREVVCEVLSRLRNDWEAAYTFFLWAGKQP 223
           V RIV I + P +SM+  +  LE  G V    E+V EVLSR+RN WEAA+TFFLWA KQP
Sbjct: 83  VRRIVDILQEPGSSMSLVKHKLESCG-VAASSELVVEVLSRVRNHWEAAFTFFLWAAKQP 141

Query: 224 GHEHSVRELHSMIAILGKMRKFDTALSIIDEMR 322
           G+ HS+R  HSMI+ILGKMRKFDTA ++IDEMR
Sbjct: 142 GYAHSLRAYHSMISILGKMRKFDTAWALIDEMR 174