BLASTX nr result

ID: Lithospermum22_contig00021556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00021556
         (1036 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520332.1| pentatricopeptide repeat-containing protein,...   134   4e-29
ref|XP_002279168.1| PREDICTED: pentatricopeptide repeat-containi...   127   3e-27
emb|CBI15606.3| unnamed protein product [Vitis vinifera]              127   3e-27
ref|XP_004149831.1| PREDICTED: pentatricopeptide repeat-containi...   124   4e-26
ref|XP_003553291.1| PREDICTED: pentatricopeptide repeat-containi...   121   3e-25

>ref|XP_002520332.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540551|gb|EEF42118.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 441

 Score =  134 bits (337), Expect = 4e-29
 Identities = 65/102 (63%), Positives = 81/102 (79%)
 Frame = +3

Query: 3   EIDKAVEMMRRMEEFNHGIATTSSYTPIIHGLCAAGRVTEACKYLTELVERGSIPREYTY 182
           EIDKAVEM+RRM+  NHG+AT+SSYTPIIH LC A RV EA  +L ELV+ GSIPREYTY
Sbjct: 334 EIDKAVEMLRRMQNMNHGLATSSSYTPIIHALCEADRVLEARDFLLELVDGGSIPREYTY 393

Query: 183 NLVCDALKSSGEMDLLDRELCEKIQEGIGSRIRQVIKVKPIV 308
            LVC+ +KS+ E++L+D E   +I++GI  R RQV KVKPI+
Sbjct: 394 KLVCETMKSAREVNLIDDEFHNRIKDGIDERFRQVKKVKPIM 435


>ref|XP_002279168.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Vitis vinifera]
          Length = 432

 Score =  127 bits (320), Expect = 3e-27
 Identities = 61/102 (59%), Positives = 81/102 (79%)
 Frame = +3

Query: 3   EIDKAVEMMRRMEEFNHGIATTSSYTPIIHGLCAAGRVTEACKYLTELVERGSIPREYTY 182
           EIDKAV+M+ +M+E NHGI TTSSYTPIIH LC  GR+ EA  +L ELV+ GS+PREYTY
Sbjct: 325 EIDKAVDMLCKMKEMNHGIPTTSSYTPIIHALCETGRILEARDFLIELVDGGSVPREYTY 384

Query: 183 NLVCDALKSSGEMDLLDRELCEKIQEGIGSRIRQVIKVKPIV 308
            +VCD+L+S+GE ++L  EL  +I+ GI +R +QV+KVK I+
Sbjct: 385 KVVCDSLRSAGEANMLGDELRGRIENGIENRYKQVMKVKLIM 426


>emb|CBI15606.3| unnamed protein product [Vitis vinifera]
          Length = 381

 Score =  127 bits (320), Expect = 3e-27
 Identities = 61/102 (59%), Positives = 81/102 (79%)
 Frame = +3

Query: 3   EIDKAVEMMRRMEEFNHGIATTSSYTPIIHGLCAAGRVTEACKYLTELVERGSIPREYTY 182
           EIDKAV+M+ +M+E NHGI TTSSYTPIIH LC  GR+ EA  +L ELV+ GS+PREYTY
Sbjct: 274 EIDKAVDMLCKMKEMNHGIPTTSSYTPIIHALCETGRILEARDFLIELVDGGSVPREYTY 333

Query: 183 NLVCDALKSSGEMDLLDRELCEKIQEGIGSRIRQVIKVKPIV 308
            +VCD+L+S+GE ++L  EL  +I+ GI +R +QV+KVK I+
Sbjct: 334 KVVCDSLRSAGEANMLGDELRGRIENGIENRYKQVMKVKLIM 375


>ref|XP_004149831.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Cucumis sativus]
           gi|449518241|ref|XP_004166151.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g77405-like [Cucumis sativus]
          Length = 445

 Score =  124 bits (311), Expect = 4e-26
 Identities = 59/102 (57%), Positives = 79/102 (77%)
 Frame = +3

Query: 3   EIDKAVEMMRRMEEFNHGIATTSSYTPIIHGLCAAGRVTEACKYLTELVERGSIPREYTY 182
           EID+A++M+R M++ NHGIAT+SSYTPIIH LC  G+V EA  +L EL+E GS+PREYTY
Sbjct: 339 EIDQAIKMLRMMQKMNHGIATSSSYTPIIHALCEGGKVIEARDFLLELLEEGSVPREYTY 398

Query: 183 NLVCDALKSSGEMDLLDRELCEKIQEGIGSRIRQVIKVKPIV 308
            LVC+ L S+G+  LLD  + E+I+ GI +R R+V KVK I+
Sbjct: 399 QLVCNLLNSAGKASLLDENVHERIRHGIENRYREVKKVKLIM 440


>ref|XP_003553291.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Glycine max]
          Length = 732

 Score =  121 bits (303), Expect = 3e-25
 Identities = 59/104 (56%), Positives = 79/104 (75%), Gaps = 2/104 (1%)
 Frame = +3

Query: 3   EIDKAVEMMRRMEEFNHGIATTSSYTPIIHGLCAAGRVTEACKYLTELVERGSIPREYTY 182
           EIDK VEM+R M+   HG+  +SSYTPIIH LC AGRV EA  +L ELVE GS+PREYTY
Sbjct: 617 EIDKGVEMLREMQRLGHGVPGSSSYTPIIHALCEAGRVVEAWWFLVELVEGGSVPREYTY 676

Query: 183 NLVCDALKSSGEMDLLDRE--LCEKIQEGIGSRIRQVIKVKPIV 308
            LVCD L+++GE  LL+    + ++I++GI +R RQ++KVKP++
Sbjct: 677 GLVCDRLRAAGEGGLLEDHDGVHKRIKDGIWNRYRQMMKVKPVM 720


Top