BLASTX nr result

ID: Lithospermum22_contig00021464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00021464
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAU90328.2| Pentatricopeptide repeat domain containing protei...   232   3e-59
ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat...   224   4e-57
emb|CBI21281.3| unnamed protein product [Vitis vinifera]              224   4e-57
ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat...   221   4e-56
ref|XP_003624492.1| Pentatricopeptide repeat-containing protein ...   221   6e-56

>gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
           [Solanum demissum]
          Length = 819

 Score =  232 bits (591), Expect = 3e-59
 Identities = 110/144 (76%), Positives = 132/144 (91%)
 Frame = -3

Query: 437 LISAYAQNGDGEATFRSFKEMIGSGLHPDSVSFLSVLTACSHRGLVDEALESFNSMTSTY 258
           LISAY+QNGD EATF SF +MI SGL+PDSVSFLSVLTACSHRGLV++AL  FNSMT  Y
Sbjct: 518 LISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVY 577

Query: 257 KLVPRKEHYASLVDVLCRSGRFKKAEELMAQMPFEPDEIMWSSVLNSCRIHKNQELAKKA 78
           KL PR++HYA+++DVLCRSGRF +AE L+++MPFEPDE+MWSSVLNSCRIHKNQ+LAKKA
Sbjct: 578 KLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKA 637

Query: 77  AEELFKMESLIDAASYVNLSNIYA 6
           A++LFKM++L DAA+YVN+SNIYA
Sbjct: 638 ADQLFKMDALRDAAAYVNMSNIYA 661


>ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  224 bits (572), Expect = 4e-57
 Identities = 108/145 (74%), Positives = 127/145 (87%)
 Frame = -3

Query: 437 LISAYAQNGDGEATFRSFKEMIGSGLHPDSVSFLSVLTACSHRGLVDEALESFNSMTSTY 258
           +ISAYAQNG+ EAT +SFKEM+ SGL PDSVSFL VL+ACSH GLV+E L  FNSMT  Y
Sbjct: 524 MISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIY 583

Query: 257 KLVPRKEHYASLVDVLCRSGRFKKAEELMAQMPFEPDEIMWSSVLNSCRIHKNQELAKKA 78
           KL PR+EHYAS+VD+LCRSGRF +AE+LMA+MP +PDEIMWSSVLN+CRIHKNQELA++A
Sbjct: 584 KLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRA 643

Query: 77  AEELFKMESLIDAASYVNLSNIYAA 3
           A++LF ME L DAA YVN+SNIYAA
Sbjct: 644 ADQLFNMEELRDAAPYVNMSNIYAA 668


>emb|CBI21281.3| unnamed protein product [Vitis vinifera]
          Length = 785

 Score =  224 bits (572), Expect = 4e-57
 Identities = 108/145 (74%), Positives = 127/145 (87%)
 Frame = -3

Query: 437 LISAYAQNGDGEATFRSFKEMIGSGLHPDSVSFLSVLTACSHRGLVDEALESFNSMTSTY 258
           +ISAYAQNG+ EAT +SFKEM+ SGL PDSVSFL VL+ACSH GLV+E L  FNSMT  Y
Sbjct: 484 MISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIY 543

Query: 257 KLVPRKEHYASLVDVLCRSGRFKKAEELMAQMPFEPDEIMWSSVLNSCRIHKNQELAKKA 78
           KL PR+EHYAS+VD+LCRSGRF +AE+LMA+MP +PDEIMWSSVLN+CRIHKNQELA++A
Sbjct: 544 KLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRA 603

Query: 77  AEELFKMESLIDAASYVNLSNIYAA 3
           A++LF ME L DAA YVN+SNIYAA
Sbjct: 604 ADQLFNMEELRDAAPYVNMSNIYAA 628


>ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Glycine max]
          Length = 815

 Score =  221 bits (564), Expect = 4e-56
 Identities = 108/145 (74%), Positives = 126/145 (86%)
 Frame = -3

Query: 437 LISAYAQNGDGEATFRSFKEMIGSGLHPDSVSFLSVLTACSHRGLVDEALESFNSMTSTY 258
           LISAYAQNGDG    RSF++MI SGL P+SVSFLS+L ACSH GLV+E L+ FNSMT  Y
Sbjct: 514 LISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVY 573

Query: 257 KLVPRKEHYASLVDVLCRSGRFKKAEELMAQMPFEPDEIMWSSVLNSCRIHKNQELAKKA 78
           KL PR+EHYAS+VD+LCRSGRF +AE+LMA+MPFEPDEIMWSS+LNSCRIHKNQELA KA
Sbjct: 574 KLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKA 633

Query: 77  AEELFKMESLIDAASYVNLSNIYAA 3
           A++LF M+ L DAA YV++SNIYAA
Sbjct: 634 ADQLFNMKGLRDAAPYVSMSNIYAA 658


>ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355499507|gb|AES80710.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  221 bits (562), Expect = 6e-56
 Identities = 108/145 (74%), Positives = 123/145 (84%)
 Frame = -3

Query: 437  LISAYAQNGDGEATFRSFKEMIGSGLHPDSVSFLSVLTACSHRGLVDEALESFNSMTSTY 258
            LISAYAQNGDG+ T R F+EM+ SGL PDSVS LS+L ACSH GLV+E L+ F+SMT  Y
Sbjct: 573  LISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIY 632

Query: 257  KLVPRKEHYASLVDVLCRSGRFKKAEELMAQMPFEPDEIMWSSVLNSCRIHKNQELAKKA 78
            KLVP+KEHYAS +D+LCR GRF +AE+LMAQMPFEPDEIMWSSVLNSC IHKNQELAKKA
Sbjct: 633  KLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKA 692

Query: 77   AEELFKMESLIDAASYVNLSNIYAA 3
            A +LF M+ L DAA YV +SNIYAA
Sbjct: 693  ANQLFNMKVLRDAAPYVTMSNIYAA 717


Top