BLASTX nr result

ID: Lithospermum22_contig00021461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00021461
         (1151 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517604.1| polypeptide deformylase, putative [Ricinus c...   344   2e-92
dbj|BAJ53237.1| JHL06P13.18 [Jatropha curcas]                         332   1e-88
ref|XP_002298107.1| peptide deformylase [Populus trichocarpa] gi...   332   1e-88
ref|XP_004156806.1| PREDICTED: peptide deformylase 1A, chloropla...   327   3e-87
ref|XP_004152208.1| PREDICTED: LOW QUALITY PROTEIN: peptide defo...   325   1e-86

>ref|XP_002517604.1| polypeptide deformylase, putative [Ricinus communis]
           gi|223543236|gb|EEF44768.1| polypeptide deformylase,
           putative [Ricinus communis]
          Length = 266

 Score =  344 bits (883), Expect = 2e-92
 Identities = 177/267 (66%), Positives = 209/267 (78%), Gaps = 6/267 (2%)
 Frame = +2

Query: 29  MEVIPRMTLRILLLTFPQNPFNPFRAYPQARTRSFQPQTHP-----LSSLIIKRHQRSSA 193
           ME + R +LR+L ++       P + +P  R     P + P     +   I ++   SS+
Sbjct: 1   METLHRFSLRLLPISLADKCLKPTKHHPIYRLTRI-PISKPDFRTTIPYSITRKSLSSSS 59

Query: 194 RVRAGWLSGLVQTKP-DFPDITKAGDPVLHEPAQEVRPEDILSERIQKIVDDMIKVMRKA 370
             +AGWL GL + K    PDI KAGDPVLHEPA+EV P++I SERIQKI+DDM+KVMR+A
Sbjct: 60  IAKAGWLLGLGENKKMSLPDIVKAGDPVLHEPAREVDPDEIGSERIQKIIDDMVKVMRRA 119

Query: 371 PGVGLAAPQIGVPLRIIVLEDTKEFIGYVPKEEIKAQDRRPFDLLVIINPKLEMKGNKTA 550
           PGVGLAAPQIGVPLRIIVLEDT E+IGY PKEE KAQDRRPFDLLVI+NPKL+ KGN+TA
Sbjct: 120 PGVGLAAPQIGVPLRIIVLEDTTEYIGYAPKEETKAQDRRPFDLLVILNPKLKKKGNRTA 179

Query: 551 LFFEGCLSVDGFRAVVERSLNVKVNGLDRDGKPVEVDASGWQARILQHECDHLDGTLYVD 730
           LFFEGCLSVDGFRAVVERSL V+V+GLDR G+P++VDASGWQARILQHECDHLDGTLYVD
Sbjct: 180 LFFEGCLSVDGFRAVVERSLEVEVSGLDRSGQPIKVDASGWQARILQHECDHLDGTLYVD 239

Query: 731 KMVQRSFRTVENLDLPLPNGFPKLGVR 811
           KMV R+FRTV+NLDLPL  G P LG +
Sbjct: 240 KMVPRTFRTVDNLDLPLAEGCPNLGAQ 266


>dbj|BAJ53237.1| JHL06P13.18 [Jatropha curcas]
          Length = 274

 Score =  332 bits (850), Expect = 1e-88
 Identities = 178/276 (64%), Positives = 206/276 (74%), Gaps = 15/276 (5%)
 Frame = +2

Query: 29  MEVIPRMTLRILLLTFPQNPFNPF-----RAYPQARTRSF------QPQ---THPLSSLI 166
           ME + R +LR+L ++  +   NP+     RA   A    F      +P+   ++P S+  
Sbjct: 1   METLQRFSLRLLPISLAEKCLNPYTHGVPRAVTLAPLSRFARMSISKPEFLSSNPKSTF- 59

Query: 167 IKRHQRSSARVRAGWLSGLVQTKP-DFPDITKAGDPVLHEPAQEVRPEDILSERIQKIVD 343
                 SS   +AGW  GL + K   FPDI KAGDPVLHEPA+EV PE+I SERIQKI+D
Sbjct: 60  -HNSFSSSLTAKAGWFLGLGEKKKTSFPDIVKAGDPVLHEPAREVDPEEIGSERIQKIID 118

Query: 344 DMIKVMRKAPGVGLAAPQIGVPLRIIVLEDTKEFIGYVPKEEIKAQDRRPFDLLVIINPK 523
           DMIK MR APGVGLAAPQIGVPLRIIVLEDTKE+I Y PKEE KAQDRRPFDLLVI+NPK
Sbjct: 119 DMIKAMRMAPGVGLAAPQIGVPLRIIVLEDTKEYIRYAPKEETKAQDRRPFDLLVILNPK 178

Query: 524 LEMKGNKTALFFEGCLSVDGFRAVVERSLNVKVNGLDRDGKPVEVDASGWQARILQHECD 703
           LE K N+TA FFEGCLSVDGFRAVVER L+V+V GL R G+P++V+ASGWQARILQHECD
Sbjct: 179 LEKKSNRTAFFFEGCLSVDGFRAVVERYLDVEVTGLSRYGQPIKVNASGWQARILQHECD 238

Query: 704 HLDGTLYVDKMVQRSFRTVENLDLPLPNGFPKLGVR 811
           HLDGTLYVDKMV R+FRT+ENLDLPL  G P LG R
Sbjct: 239 HLDGTLYVDKMVPRTFRTIENLDLPLAEGCPNLGAR 274


>ref|XP_002298107.1| peptide deformylase [Populus trichocarpa]
           gi|222845365|gb|EEE82912.1| peptide deformylase [Populus
           trichocarpa]
          Length = 299

 Score =  332 bits (850), Expect = 1e-88
 Identities = 174/274 (63%), Positives = 207/274 (75%), Gaps = 8/274 (2%)
 Frame = +2

Query: 14  IHHSS---MEVIPRMTLRILLLTFPQNPFNPFRAYPQAR-TRSFQPQT---HPLSSLIIK 172
           + HSS   ME + R +LR+L ++  +  F P       R TR   P+    +P      +
Sbjct: 26  VQHSSSYHMESLHRCSLRLLPISLAEKCFKPTTLPTIFRFTRMLVPKPEFMNPNPHFTTR 85

Query: 173 RHQRSSARVRAGWLSGLVQTKP-DFPDITKAGDPVLHEPAQEVRPEDILSERIQKIVDDM 349
           +   SS   +AGWL G+ + K    PDI KAGDPVLHEPA+EV P++I SERIQKI+DDM
Sbjct: 86  KSLSSSHTAKAGWLLGMGEKKKTSLPDIVKAGDPVLHEPAREVDPKEIGSERIQKIIDDM 145

Query: 350 IKVMRKAPGVGLAAPQIGVPLRIIVLEDTKEFIGYVPKEEIKAQDRRPFDLLVIINPKLE 529
           +KVMR APGVGLAAPQIG+PLRIIVLEDT E+IGY PK E KAQDRRPFDLLVI+NPKL+
Sbjct: 146 VKVMRMAPGVGLAAPQIGIPLRIIVLEDTAEYIGYAPKNETKAQDRRPFDLLVIVNPKLK 205

Query: 530 MKGNKTALFFEGCLSVDGFRAVVERSLNVKVNGLDRDGKPVEVDASGWQARILQHECDHL 709
            K N+TA FFEGCLSVDGFRA+VER L+V+V GL RDG+P++VDASGWQARILQHECDHL
Sbjct: 206 KKSNRTAFFFEGCLSVDGFRAIVERHLDVEVIGLSRDGQPIKVDASGWQARILQHECDHL 265

Query: 710 DGTLYVDKMVQRSFRTVENLDLPLPNGFPKLGVR 811
           +GTLYVDKMV R+FRTVENLDLPL  G P+ G R
Sbjct: 266 EGTLYVDKMVPRTFRTVENLDLPLAEGCPEPGSR 299


>ref|XP_004156806.1| PREDICTED: peptide deformylase 1A, chloroplastic-like isoform 1
           [Cucumis sativus]
          Length = 267

 Score =  327 bits (839), Expect = 3e-87
 Identities = 173/267 (64%), Positives = 198/267 (74%), Gaps = 6/267 (2%)
 Frame = +2

Query: 29  MEVIPRMTLRILLLTFPQNPFNPFRAYPQARTRSFQPQTH----PLSSLIIKRHQRSSAR 196
           ME I R + R+  ++  +    P    P  R    +P +     P    + K +  SS  
Sbjct: 1   MEAIHRFSFRLFPISLAERCRKPSLLPPNFRKLIHRPISSSPNIPKFIPVPKTYSSSSTS 60

Query: 197 V-RAGWLSGL-VQTKPDFPDITKAGDPVLHEPAQEVRPEDILSERIQKIVDDMIKVMRKA 370
           + +AGW  GL  Q K   P I KAGDPVLHEPA+EV P++I SE++QKI+DDMI  MRKA
Sbjct: 61  IAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVQKIIDDMILTMRKA 120

Query: 371 PGVGLAAPQIGVPLRIIVLEDTKEFIGYVPKEEIKAQDRRPFDLLVIINPKLEMKGNKTA 550
           PGVGLAAPQIG+PLRIIVLEDTKE+I Y PKEEIKAQDRR FDLLVIINPKL+ K NKTA
Sbjct: 121 PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFDLLVIINPKLKSKSNKTA 180

Query: 551 LFFEGCLSVDGFRAVVERSLNVKVNGLDRDGKPVEVDASGWQARILQHECDHLDGTLYVD 730
           LFFEGCLSVDGFRAVVER L+V+V G DRDG P++VDASGWQARILQHECDHLDGTLYVD
Sbjct: 181 LFFEGCLSVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLYVD 240

Query: 731 KMVQRSFRTVENLDLPLPNGFPKLGVR 811
           KMV R+FRT ENL LPL  G PKLG R
Sbjct: 241 KMVPRTFRTTENLTLPLAEGCPKLGAR 267


>ref|XP_004152208.1| PREDICTED: LOW QUALITY PROTEIN: peptide deformylase 1A,
           chloroplastic-like [Cucumis sativus]
          Length = 267

 Score =  325 bits (833), Expect = 1e-86
 Identities = 172/267 (64%), Positives = 197/267 (73%), Gaps = 6/267 (2%)
 Frame = +2

Query: 29  MEVIPRMTLRILLLTFPQNPFNPFRAYPQARTRSFQPQTH----PLSSLIIKRHQRSSAR 196
           ME I R + R+  ++  +    P    P  R    +P +     P    + K +  SS  
Sbjct: 1   MEAIHRFSFRLFPISLAERCRKPSLLPPNFRKLIHRPISSSPNIPKFIPVPKTYSSSSTS 60

Query: 197 V-RAGWLSGL-VQTKPDFPDITKAGDPVLHEPAQEVRPEDILSERIQKIVDDMIKVMRKA 370
           + +AGW  GL  Q K   P I KAGDPVLHEPA+EV P++I SE++ KI+DDMI  MRKA
Sbjct: 61  IAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVXKIIDDMILTMRKA 120

Query: 371 PGVGLAAPQIGVPLRIIVLEDTKEFIGYVPKEEIKAQDRRPFDLLVIINPKLEMKGNKTA 550
           PGVGLAAPQIG+PLRIIVLEDTKE+I Y PKEEIKAQDRR FDLLVIINPKL+ K NKTA
Sbjct: 121 PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFDLLVIINPKLKSKSNKTA 180

Query: 551 LFFEGCLSVDGFRAVVERSLNVKVNGLDRDGKPVEVDASGWQARILQHECDHLDGTLYVD 730
           LFFEGCLSVDGFRAVVER L+V+V G DRDG P++VDASGWQARILQHECDHLDGTLYVD
Sbjct: 181 LFFEGCLSVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLYVD 240

Query: 731 KMVQRSFRTVENLDLPLPNGFPKLGVR 811
           KMV R+FRT ENL LPL  G PKLG R
Sbjct: 241 KMVPRTFRTTENLTLPLAEGCPKLGAR 267


Top