BLASTX nr result

ID: Lithospermum22_contig00021450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00021450
         (902 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein lig...   169   2e-40
emb|CBI27748.3| unnamed protein product [Vitis vinifera]              169   2e-40
ref|XP_002516202.1| zinc finger protein, putative [Ricinus commu...   168   1e-39
ref|XP_002324718.1| predicted protein [Populus trichocarpa] gi|2...   162   5e-38
ref|XP_002516203.1| zinc finger protein, putative [Ricinus commu...   162   1e-37

>ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-B-like
           [Vitis vinifera]
          Length = 358

 Score =  169 bits (427), Expect(2) = 2e-40
 Identities = 67/145 (46%), Positives = 99/145 (68%), Gaps = 1/145 (0%)
 Frame = +2

Query: 200 DFPPKFDCKICETRKPIHDIFRVKGCDHFYCSTCIAQHVTCNIKESVTQVTCPFSGCNQV 379
           D PP F C+IC   KP++  F +KGC H YCS C+ ++V   ++++V++++CP   C  V
Sbjct: 118 DPPPTFVCEICIDPKPLNHSFSIKGCPHSYCSDCMTKYVASKLQDNVSRISCPAPNCTGV 177

Query: 380 LQPENCKDILPPEVYDQWGDLLCEEAIMGCERLNCPFEGCGGLVIND-GDVVRECECPYC 556
           L+P+ C+ ILP  V+D+WG+ LCE  I+G ++  CP++ C  L+I D G+V++E ECP C
Sbjct: 178 LEPQQCRPILPSHVFDRWGNALCEALILGSQKFYCPYKDCSALLIRDEGEVIKESECPNC 237

Query: 557 FRLFCVKCRVPWHADIDCATFQMRN 631
            RLFC +C VPWH+ IDC  FQ  N
Sbjct: 238 RRLFCAQCEVPWHSGIDCGEFQKLN 262



 Score = 23.9 bits (50), Expect(2) = 2e-40
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 651 LNCRCGSSCCYN 686
           + CRCG + CYN
Sbjct: 301 IRCRCGFAFCYN 312


>emb|CBI27748.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  169 bits (427), Expect(2) = 2e-40
 Identities = 67/145 (46%), Positives = 99/145 (68%), Gaps = 1/145 (0%)
 Frame = +2

Query: 200 DFPPKFDCKICETRKPIHDIFRVKGCDHFYCSTCIAQHVTCNIKESVTQVTCPFSGCNQV 379
           D PP F C+IC   KP++  F +KGC H YCS C+ ++V   ++++V++++CP   C  V
Sbjct: 118 DPPPTFVCEICIDPKPLNHSFSIKGCPHSYCSDCMTKYVASKLQDNVSRISCPAPNCTGV 177

Query: 380 LQPENCKDILPPEVYDQWGDLLCEEAIMGCERLNCPFEGCGGLVIND-GDVVRECECPYC 556
           L+P+ C+ ILP  V+D+WG+ LCE  I+G ++  CP++ C  L+I D G+V++E ECP C
Sbjct: 178 LEPQQCRPILPSHVFDRWGNALCEALILGSQKFYCPYKDCSALLIRDEGEVIKESECPNC 237

Query: 557 FRLFCVKCRVPWHADIDCATFQMRN 631
            RLFC +C VPWH+ IDC  FQ  N
Sbjct: 238 RRLFCAQCEVPWHSGIDCGEFQKLN 262



 Score = 23.9 bits (50), Expect(2) = 2e-40
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 651 LNCRCGSSCCYN 686
           + CRCG + CYN
Sbjct: 301 IRCRCGFAFCYN 312


>ref|XP_002516202.1| zinc finger protein, putative [Ricinus communis]
           gi|223544688|gb|EEF46204.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 400

 Score =  168 bits (426), Expect = 1e-39
 Identities = 70/145 (48%), Positives = 100/145 (68%), Gaps = 1/145 (0%)
 Frame = +2

Query: 191 EPLDFPPKFDCKICETRKPIHDIFRVKGCDHFYCSTCIAQHVTCNIKESVTQVTCPFSGC 370
           EP D P +F C+IC   K   +   ++GC H YC+ C+A++V   I+E++T + CP SGC
Sbjct: 198 EPNDHP-QFVCEICVESKTADESLAIRGCTHAYCTDCMAKYVASKIQENITGIYCPVSGC 256

Query: 371 NQVLQPENCKDILPPEVYDQWGDLLCEEAIMGCERLNCPFEGCGGLVIND-GDVVRECEC 547
             +L+PE C+ ILP EV+D+WG+ LCE   +G ++  CPF+ C  ++IND G+V+RE EC
Sbjct: 257 GGLLEPEYCRSILPQEVFDRWGNALCEALNLGSQKFYCPFKDCSAMLINDGGEVIRESEC 316

Query: 548 PYCFRLFCVKCRVPWHADIDCATFQ 622
           P+C RLFC  C+VPWH+ IDC  FQ
Sbjct: 317 PHCRRLFCAHCKVPWHSGIDCNKFQ 341


>ref|XP_002324718.1| predicted protein [Populus trichocarpa] gi|222866152|gb|EEF03283.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score =  162 bits (409), Expect(2) = 5e-38
 Identities = 68/182 (37%), Positives = 110/182 (60%), Gaps = 9/182 (4%)
 Frame = +2

Query: 107 DSDDEI--------IVVSETLIQLTCSNSESEFEDDEPLDFPPKFDCKICETRKPIHDIF 262
           D DD+I        ++ S    + T   S +E          P F C+IC     + + F
Sbjct: 54  DEDDDIKVLDFLPEVIPSRKQKEPTFIESVAEKGQSSNSQIDPDFVCQICVEPTILKNSF 113

Query: 263 RVKGCDHFYCSTCIAQHVTCNIKESVTQVTCPFSGCNQVLQPENCKDILPPEVYDQWGDL 442
            +KGC H YC+ C+ ++V+  ++E++T++ CP   C   L+PE+C+ +LP  V+D+WG+ 
Sbjct: 114 LIKGCTHAYCTECMVKYVSSKLQENITKICCPVPDCKGALEPEDCRSVLPENVFDRWGNA 173

Query: 443 LCEEAIMGCERLNCPFEGCGGLVINDG-DVVRECECPYCFRLFCVKCRVPWHADIDCATF 619
           LCE  I+G ++  CPF+ C  ++I+DG +VVRE ECP C+R+FC +C+VPWH+ I C  +
Sbjct: 174 LCEAVILGSQKFYCPFKDCSAMLIDDGEEVVRESECPNCWRMFCAQCKVPWHSQISCEEY 233

Query: 620 QM 625
           +M
Sbjct: 234 KM 235



 Score = 22.7 bits (47), Expect(2) = 5e-38
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 651 LNCRCGSSCCYN 686
           + CRCG+  CY+
Sbjct: 276 MKCRCGTQFCYS 287


>ref|XP_002516203.1| zinc finger protein, putative [Ricinus communis]
           gi|223544689|gb|EEF46205.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 264

 Score =  162 bits (410), Expect = 1e-37
 Identities = 66/158 (41%), Positives = 102/158 (64%), Gaps = 1/158 (0%)
 Frame = +2

Query: 152 LTCSNSESEFEDDEPLDFPPKFDCKICETRKPIHDIFRVKGCDHFYCSTCIAQHVTCNIK 331
           LT  +  ++ +++   +  P F C IC   K ++D F +KGC HFYC  C  ++VT  + 
Sbjct: 48  LTPKSDHTDSDEEHQENNSPTFICDICVEEKALNDSFNLKGCTHFYCIDCTVRYVTSKLD 107

Query: 332 ESVTQVTCPFSGCNQVLQPENCKDILPPEVYDQWGDLLCEEAIMGCERLNCPFEGCGGLV 511
           +++  ++CP S C  +L+PE C+ ILP +V+D+WG  LCE  I G ++  CPF+ C GL+
Sbjct: 108 DNLISISCPGSDCEGMLEPEYCRQILPQDVFDRWGIALCESLIDGSQKFYCPFKDCSGLL 167

Query: 512 IND-GDVVRECECPYCFRLFCVKCRVPWHADIDCATFQ 622
           I+D G  + + ECP+C R FCVKC+VPWH+++ C  FQ
Sbjct: 168 IDDTGMEIEKSECPFCKRSFCVKCKVPWHSELSCKKFQ 205


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