BLASTX nr result

ID: Lithospermum22_contig00021412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00021412
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABJ96383.1| hypothetical protein [Prunus persica]                   84   1e-14
emb|CAN62310.1| hypothetical protein VITISV_008928 [Vitis vinifera]    81   1e-13
gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa...    74   9e-12
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]               74   9e-12
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]    74   9e-12

>gb|ABJ96383.1| hypothetical protein [Prunus persica]
          Length = 193

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 36/64 (56%), Positives = 52/64 (81%)
 Frame = -2

Query: 213 ANSVFHARTKHIKINFHFVREKVAWKELQIQLISSKDQIVDVLTKPLGTFRFQFFRDKLR 34
           AN +FHARTKH++I++HFVR++V+  +L +Q IS+KDQ+ D++TKPL + RF F RDKLR
Sbjct: 128 ANPIFHARTKHVEIDYHFVRDQVSAGKLSVQFISTKDQLADIMTKPLSSPRFTFIRDKLR 187

Query: 33  LSSR 22
           +  R
Sbjct: 188 VHER 191


>emb|CAN62310.1| hypothetical protein VITISV_008928 [Vitis vinifera]
          Length = 406

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/68 (57%), Positives = 50/68 (73%)
 Frame = -2

Query: 213 ANSVFHARTKHIKINFHFVREKVAWKELQIQLISSKDQIVDVLTKPLGTFRFQFFRDKLR 34
           +N VFHARTKHI++++HF+RE+V    +Q++ IS  DQI D+LTKPLG   F   RDKL 
Sbjct: 339 SNPVFHARTKHIELDYHFIREQVQQCNIQVRFISLDDQIADILTKPLGQCLFVNHRDKLW 398

Query: 33  LSSRPPSA 10
           L S PPSA
Sbjct: 399 LYSSPPSA 406


>gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|31433472|gb|AAP54977.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1031

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 34/62 (54%), Positives = 47/62 (75%)
 Frame = -2

Query: 213  ANSVFHARTKHIKINFHFVREKVAWKELQIQLISSKDQIVDVLTKPLGTFRFQFFRDKLR 34
            AN VFHARTKHI++++HFVRE+VA K LQ++ IS+KDQ+ D  TK L   + + FR+ L 
Sbjct: 967  ANPVFHARTKHIEVDYHFVRERVARKLLQVEYISTKDQVADGFTKTLSVRQLEMFRNNLN 1026

Query: 33   LS 28
            L+
Sbjct: 1027 LT 1028


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 33/67 (49%), Positives = 48/67 (71%)
 Frame = -2

Query: 213  ANSVFHARTKHIKINFHFVREKVAWKELQIQLISSKDQIVDVLTKPLGTFRFQFFRDKLR 34
            +N VFH+RTKHI++++H+VR+KV  +EL +  +S+ DQ  D+ TK L T RFQF   KL 
Sbjct: 1305 SNPVFHSRTKHIEVDYHYVRDKVVRQELAVSYVSTADQTADIFTKGLSTQRFQFLASKLP 1364

Query: 33   LSSRPPS 13
            + +RP S
Sbjct: 1365 VRARPLS 1371


>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
          Length = 1131

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 34/64 (53%), Positives = 46/64 (71%)
 Frame = -2

Query: 210  NSVFHARTKHIKINFHFVREKVAWKELQIQLISSKDQIVDVLTKPLGTFRFQFFRDKLRL 31
            N V H+R KH++I++HFVRE+V  K L ++ + SKDQ+VD+LTK L T RF   R KL +
Sbjct: 1052 NPVLHSRAKHVEIDYHFVRERVLPKTLDVRFLPSKDQVVDILTKALSTQRFLHLRSKLTV 1111

Query: 30   SSRP 19
             SRP
Sbjct: 1112 LSRP 1115