BLASTX nr result

ID: Lithospermum22_contig00021339 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00021339
         (836 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16498.3| unnamed protein product [Vitis vinifera]              192   6e-47
ref|XP_002283489.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   192   6e-47
ref|XP_003524948.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   189   5e-46
ref|XP_004142160.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   182   1e-43
ref|XP_002527063.1| dead box ATP-dependent RNA helicase, putativ...   182   1e-43

>emb|CBI16498.3| unnamed protein product [Vitis vinifera]
          Length = 389

 Score =  192 bits (489), Expect = 6e-47
 Identities = 107/196 (54%), Positives = 123/196 (62%), Gaps = 5/196 (2%)
 Frame = +2

Query: 263 TSWADIVENAAPVENPISGPSGGN----RAPSSRSSYVPPHLRNRGPTAEAPLPSYRGPS 430
           +SWAD V N+A  EN  +G S  N     A  +R +Y+PPHLRN  P++E P P+Y GPS
Sbjct: 3   SSWADSVVNSA-AENVAAGSSASNGVATAAKPTRGAYIPPHLRNLTPSSEPPAPAYSGPS 61

Query: 431 SGTDRFG-PAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDREVNPFDNDDANVD 607
           S  DR G                                      +REVNPF +D   VD
Sbjct: 62  SANDRSGYSGNRWGGPRNDSNQTGYSSGGRTGGWNNKSGGWDRGREREVNPFGDD---VD 118

Query: 608 AEPVVSEQENSGINFDAYEDIPVETSGENVPPPVNTFADIDLGNALDLNIRRCKYVKPTP 787
            E V SEQEN+GINFDAYEDIPVETSG+NVPPPVNTFA+IDLG AL+ NI+RCKYVKPTP
Sbjct: 119 TEKVFSEQENTGINFDAYEDIPVETSGDNVPPPVNTFAEIDLGEALNQNIKRCKYVKPTP 178

Query: 788 VQRHTIPISLAGRDLM 835
           VQRH IPISLAGRDLM
Sbjct: 179 VQRHAIPISLAGRDLM 194


>ref|XP_002283489.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37 [Vitis vinifera]
           gi|147854540|emb|CAN78578.1| hypothetical protein
           VITISV_013679 [Vitis vinifera]
          Length = 612

 Score =  192 bits (489), Expect = 6e-47
 Identities = 107/196 (54%), Positives = 123/196 (62%), Gaps = 5/196 (2%)
 Frame = +2

Query: 263 TSWADIVENAAPVENPISGPSGGN----RAPSSRSSYVPPHLRNRGPTAEAPLPSYRGPS 430
           +SWAD V N+A  EN  +G S  N     A  +R +Y+PPHLRN  P++E P P+Y GPS
Sbjct: 3   SSWADSVVNSA-AENVAAGSSASNGVATAAKPTRGAYIPPHLRNLTPSSEPPAPAYSGPS 61

Query: 431 SGTDRFG-PAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDREVNPFDNDDANVD 607
           S  DR G                                      +REVNPF +D   VD
Sbjct: 62  SANDRSGYSGNRWGGPRNDSNQTGYSSGGRTGGWNNKSGGWDRGREREVNPFGDD---VD 118

Query: 608 AEPVVSEQENSGINFDAYEDIPVETSGENVPPPVNTFADIDLGNALDLNIRRCKYVKPTP 787
            E V SEQEN+GINFDAYEDIPVETSG+NVPPPVNTFA+IDLG AL+ NI+RCKYVKPTP
Sbjct: 119 TEKVFSEQENTGINFDAYEDIPVETSGDNVPPPVNTFAEIDLGEALNQNIKRCKYVKPTP 178

Query: 788 VQRHTIPISLAGRDLM 835
           VQRH IPISLAGRDLM
Sbjct: 179 VQRHAIPISLAGRDLM 194


>ref|XP_003524948.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Glycine
           max]
          Length = 614

 Score =  189 bits (481), Expect = 5e-46
 Identities = 108/198 (54%), Positives = 124/198 (62%), Gaps = 7/198 (3%)
 Frame = +2

Query: 263 TSWADIV-----ENAAPVENPISGPSGGNRAPSSRSSYVPPHLRNRGPTAE--APLPSYR 421
           TSWAD+      ENA P  +  +  +G N AP+ R  YVPPHLRNR P AE  AP P+Y 
Sbjct: 3   TSWADLAANSAAENAGPGSSANNVGTGSNLAPT-RPVYVPPHLRNRQPAAESPAPAPAYS 61

Query: 422 GPSSGTDRFGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDREVNPFDNDDAN 601
           GPSSG    G +                                   +REVNPF+ +D  
Sbjct: 62  GPSSGAGNSG-SRYAAPRNDYRPGYGGGGGGRTGGWGNKSGGWDRGREREVNPFEEED-- 118

Query: 602 VDAEPVVSEQENSGINFDAYEDIPVETSGENVPPPVNTFADIDLGNALDLNIRRCKYVKP 781
            +AE   SEQEN+GINFDAYEDIPVETSG+NVPPPVNTFA+IDLG AL+ NIRRCKYV+P
Sbjct: 119 -NAEEAFSEQENTGINFDAYEDIPVETSGDNVPPPVNTFAEIDLGEALNQNIRRCKYVRP 177

Query: 782 TPVQRHTIPISLAGRDLM 835
           TPVQRH IPISLAGRDLM
Sbjct: 178 TPVQRHAIPISLAGRDLM 195


>ref|XP_004142160.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Cucumis
           sativus]
          Length = 625

 Score =  182 bits (461), Expect = 1e-43
 Identities = 104/200 (52%), Positives = 118/200 (59%), Gaps = 9/200 (4%)
 Frame = +2

Query: 263 TSWADIVENAAPVENPISGP----SGGNRAPSSRSSYVPPHLRNRGPTAEAPLPSYRGPS 430
           TSWAD+  ++A  EN  +G     S G      RS+YVPPHLRNR   A+ P  +  GP+
Sbjct: 3   TSWADLAASSA-AENVAAGSANNCSAGTTTAPGRSAYVPPHLRNRTAPADLPAAANSGPA 61

Query: 431 SGTDRFGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDR-----EVNPFDNDD 595
            G DR G A                                   DR     EVNPF +++
Sbjct: 62  VGNDRSGHAGSRWGGGPRNDYNNRSGYSGGSRGGGWGGSRGGGWDRGRGDREVNPFGDEE 121

Query: 596 ANVDAEPVVSEQENSGINFDAYEDIPVETSGENVPPPVNTFADIDLGNALDLNIRRCKYV 775
              D E    EQEN+GINFDAYEDIPVETSGENVPPPVNTFA+IDLG AL+ NIRRCKYV
Sbjct: 122 ---DTEEAFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNQNIRRCKYV 178

Query: 776 KPTPVQRHTIPISLAGRDLM 835
           KPTPVQRH IPISLAGRDLM
Sbjct: 179 KPTPVQRHAIPISLAGRDLM 198


>ref|XP_002527063.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223533568|gb|EEF35307.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 650

 Score =  182 bits (461), Expect = 1e-43
 Identities = 106/232 (45%), Positives = 126/232 (54%), Gaps = 37/232 (15%)
 Frame = +2

Query: 251 MRKSTSWADIVENAAP--------VENPISGPSGGNRAPSS------------------- 349
           M K TSWAD+  N+A          E  +S  S   RA ++                   
Sbjct: 1   MSKRTSWADLAANSAAENSFDNSVAEEKVSANSASERASANSASEKASAGSFGNNGSVGG 60

Query: 350 -------RSSYVPPHLRNRGPTAEAPLPSYRGPSSGTDRFGPAXXXXXXXXXXXXXXXXX 508
                  R +Y+PPHLRNR P+++ P P+Y GPS   DR G                   
Sbjct: 61  NTSAAPNRPAYIPPHLRNRVPSSDPPAPAYSGPSLSNDRQGHGGSRGGGPRNDFRSGYGA 120

Query: 509 XXXXXXXXXXXXXXXXXX---DREVNPFDNDDANVDAEPVVSEQENSGINFDAYEDIPVE 679
                                +REVNPF +D   +D+E V +EQE++GINFDAYEDIPVE
Sbjct: 121 GGGGGRGSNWGTRSGGWDRGREREVNPFGDD---IDSEQVFTEQESTGINFDAYEDIPVE 177

Query: 680 TSGENVPPPVNTFADIDLGNALDLNIRRCKYVKPTPVQRHTIPISLAGRDLM 835
           TSGENVPPPVNTFA+IDLG AL+LNIRRCKYVKPTPVQRH IPISL GRDLM
Sbjct: 178 TSGENVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISLGGRDLM 229


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