BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00021301
         (1305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containi...   282   2e-73
emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]   278   2e-72
ref|XP_002305195.1| predicted protein [Populus trichocarpa] gi|2...   255   2e-65
ref|XP_002531188.1| pentatricopeptide repeat-containing protein,...   241   3e-61
ref|XP_004140361.1| PREDICTED: pentatricopeptide repeat-containi...   236   1e-59

>ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
            mitochondrial-like [Vitis vinifera]
          Length = 547

 Score =  282 bits (721), Expect = 2e-73
 Identities = 141/261 (54%), Positives = 184/261 (70%)
 Frame = +2

Query: 2    GLVLLKRMLQNHMILDVIGCSLVVLAKLKKGDLEAAWEVFEGMLKRGFDGNSFVYTLFIG 181
            G+++LKR+LQ +MILD I  SL+  AK+K G L++AWEV+E ML RGF  N+FVYTLFIG
Sbjct: 280  GMLILKRLLQKNMILDTISYSLIAYAKVKYGTLDSAWEVYEEMLNRGFHPNAFVYTLFIG 339

Query: 182  AYCDQRMIEDAVEVLEEMENSGFKPFDETFDCLIQGCCRTQWLEDSLKYCERMMEMGLVP 361
            ++C +  IE+A E++++MEN+G  P+DETF+ LI GC +   LE+ L+ CERMM+ GLVP
Sbjct: 340  SHCVEGRIEEANELMQDMENAGLMPYDETFNLLIAGCSKAGRLEEGLRLCERMMQRGLVP 399

Query: 362  SRLAFNEMTNKLCENGYSKRVDEMLTVLLDKGFVPDSITYSCLIAGYGKEGNVEDALKLY 541
            S  AFN M  KLCE+G  KR DEMLT+LLDKGFVPD ITYS LIA YGK G ++  LKLY
Sbjct: 400  SCWAFNLMAGKLCESGVVKRADEMLTLLLDKGFVPDEITYSNLIASYGKLGEIQQVLKLY 459

Query: 542  YEMEYKSISPDAAAFNSLIVSLCHHKRLSEVEKFLMVMKDRQLRXXXXXXXXXXXXXXXK 721
            YEMEY+S+SP   AF SLI SLC  ++L + EK+L +MKDR +                K
Sbjct: 460  YEMEYRSLSPGLLAFESLIRSLCQCRKLEKAEKYLRIMKDRSIAISTCVYETLISSYFEK 519

Query: 722  RDKIRAQELCREMVGVQVRAS 784
             D++RA +L  EMV   ++ S
Sbjct: 520  GDELRASQLHNEMVSRGLKPS 540



 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 43/173 (24%), Positives = 83/173 (47%)
 Frame = +2

Query: 62  SLVVLAKLKKGDLEAAWEVFEGMLKRGFDGNSFVYTLFIGAYCDQRMIEDAVEVLEEMEN 241
           +L++    K G LE    + E M++RG   + + + L  G  C+  +++ A E+L  + +
Sbjct: 370 NLLIAGCSKAGRLEEGLRLCERMMQRGLVPSCWAFNLMAGKLCESGVVKRADEMLTLLLD 429

Query: 242 SGFKPFDETFDCLIQGCCRTQWLEDSLKYCERMMEMGLVPSRLAFNEMTNKLCENGYSKR 421
            GF P + T+  LI    +   ++  LK    M    L P  LAF  +   LC+    ++
Sbjct: 430 KGFVPDEITYSNLIASYGKLGEIQQVLKLYYEMEYRSLSPGLLAFESLIRSLCQCRKLEK 489

Query: 422 VDEMLTVLLDKGFVPDSITYSCLIAGYGKEGNVEDALKLYYEMEYKSISPDAA 580
            ++ L ++ D+     +  Y  LI+ Y ++G+   A +L+ EM  + + P  +
Sbjct: 490 AEKYLRIMKDRSIAISTCVYETLISSYFEKGDELRASQLHNEMVSRGLKPSCS 542



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 43/209 (20%), Positives = 91/209 (43%)
 Frame = +2

Query: 44  LDVIGCSLVVLAKLKKGDLEAAWEVFEGMLKRGFDGNSFVYTLFIGAYCDQRMIEDAVEV 223
           L +I  + ++    K  +    W+++E M++     N    ++ I A C +  ++  V++
Sbjct: 189 LSLISFNTLLHVVQKSDNYPLVWKIYEHMIRVRKYPNEVSVSVMISALCKEGALQKFVDM 248

Query: 224 LEEMENSGFKPFDETFDCLIQGCCRTQWLEDSLKYCERMMEMGLVPSRLAFNEMTNKLCE 403
           L+ +      P      C+I        +E  +   +R+++  ++   ++++ +     +
Sbjct: 249 LDRIHGKRCSPIVIVNTCMIFRMLEEGRVEQGMLILKRLLQKNMILDTISYSLIAYAKVK 308

Query: 404 NGYSKRVDEMLTVLLDKGFVPDSITYSCLIAGYGKEGNVEDALKLYYEMEYKSISPDAAA 583
            G      E+   +L++GF P++  Y+  I  +  EG +E+A +L  +ME   + P    
Sbjct: 309 YGTLDSAWEVYEEMLNRGFHPNAFVYTLFIGSHCVEGRIEEANELMQDMENAGLMPYDET 368

Query: 584 FNSLIVSLCHHKRLSEVEKFLMVMKDRQL 670
           FN LI       RL E  +    M  R L
Sbjct: 369 FNLLIAGCSKAGRLEEGLRLCERMMQRGL 397


>emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]
          Length = 642

 Score =  278 bits (711), Expect = 2e-72
 Identities = 137/254 (53%), Positives = 180/254 (70%)
 Frame = +2

Query: 2    GLVLLKRMLQNHMILDVIGCSLVVLAKLKKGDLEAAWEVFEGMLKRGFDGNSFVYTLFIG 181
            G+++LKR+LQ +MILD I  SL+  AK+K G L++AWEV+E ML RGF  N+FVYTLFIG
Sbjct: 280  GMLILKRLLQKNMILDTISYSLIAYAKVKYGTLDSAWEVYEEMLNRGFHPNAFVYTLFIG 339

Query: 182  AYCDQRMIEDAVEVLEEMENSGFKPFDETFDCLIQGCCRTQWLEDSLKYCERMMEMGLVP 361
            ++C +  IE+A E++++MEN+G  P+DETF+ LI GC +   LE+ L+ CERMM+ GLVP
Sbjct: 340  SHCVEGRIEEANELMQDMENAGLMPYDETFNLLIAGCSKAGRLEEGLRLCERMMQRGLVP 399

Query: 362  SRLAFNEMTNKLCENGYSKRVDEMLTVLLDKGFVPDSITYSCLIAGYGKEGNVEDALKLY 541
            S  AFN M  KLCE+G  KR DEMLT+LLDKGFVPD ITYS LIA YGK G ++  LKLY
Sbjct: 400  SCWAFNLMAGKLCESGVVKRADEMLTLLLDKGFVPDEITYSNLIASYGKLGEIQQVLKLY 459

Query: 542  YEMEYKSISPDAAAFNSLIVSLCHHKRLSEVEKFLMVMKDRQLRXXXXXXXXXXXXXXXK 721
            YEMEY+S+SP    F S+I SLC  ++L + EK+L +MKDR +                K
Sbjct: 460  YEMEYRSLSPGLLVFESIIRSLCQCRKLEKAEKYLRIMKDRSIAISTCVYETLISGYFEK 519

Query: 722  RDKIRAQELCREMV 763
             D++RA +L  EM+
Sbjct: 520  GDELRASQLHNEML 533



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 43/209 (20%), Positives = 91/209 (43%)
 Frame = +2

Query: 44  LDVIGCSLVVLAKLKKGDLEAAWEVFEGMLKRGFDGNSFVYTLFIGAYCDQRMIEDAVEV 223
           L +I  + ++    K  +    W+++E M++     N    ++ I A C +  ++  V++
Sbjct: 189 LSLISFNXLLHVVQKSDNYPLVWKIYEHMIRVRKYPNEVSVSVMISALCKEGALQKFVDM 248

Query: 224 LEEMENSGFKPFDETFDCLIQGCCRTQWLEDSLKYCERMMEMGLVPSRLAFNEMTNKLCE 403
           L+ +      P      C+I        +E  +   +R+++  ++   ++++ +     +
Sbjct: 249 LDRIHGKRCSPIVIVNTCMIFRMLEEGRVEQGMLILKRLLQKNMILDTISYSLIAYAKVK 308

Query: 404 NGYSKRVDEMLTVLLDKGFVPDSITYSCLIAGYGKEGNVEDALKLYYEMEYKSISPDAAA 583
            G      E+   +L++GF P++  Y+  I  +  EG +E+A +L  +ME   + P    
Sbjct: 309 YGTLDSAWEVYEEMLNRGFHPNAFVYTLFIGSHCVEGRIEEANELMQDMENAGLMPYDET 368

Query: 584 FNSLIVSLCHHKRLSEVEKFLMVMKDRQL 670
           FN LI       RL E  +    M  R L
Sbjct: 369 FNLLIAGCSKAGRLEEGLRLCERMMQRGL 397


>ref|XP_002305195.1| predicted protein [Populus trichocarpa] gi|222848159|gb|EEE85706.1|
            predicted protein [Populus trichocarpa]
          Length = 556

 Score =  255 bits (651), Expect = 2e-65
 Identities = 131/254 (51%), Positives = 170/254 (66%)
 Frame = +2

Query: 2    GLVLLKRMLQNHMILDVIGCSLVVLAKLKKGDLEAAWEVFEGMLKRGFDGNSFVYTLFIG 181
            GL LLK ML+ +MILD +  SL+V AK+K G+L +A +V+E MLKRGF+ NSFVYT FIG
Sbjct: 287  GLALLKMMLRKNMILDTVAYSLIVYAKVKLGNLNSAMQVYEEMLKRGFNANSFVYTSFIG 346

Query: 182  AYCDQRMIEDAVEVLEEMENSGFKPFDETFDCLIQGCCRTQWLEDSLKYCERMMEMGLVP 361
            AYC +  IE+A ++L+EMEN G KP+ +TF+ L++GC +   +E++L YC++MMEMG VP
Sbjct: 347  AYCKEERIEEANQLLQEMENMGLKPYGDTFNFLLEGCAKAGRVEETLSYCKKMMEMGHVP 406

Query: 362  SRLAFNEMTNKLCENGYSKRVDEMLTVLLDKGFVPDSITYSCLIAGYGKEGNVEDALKLY 541
            S  AFNEM  KLC      R +EMLT LLD+GF+ D ITYS LI+GY K   +++ LKLY
Sbjct: 407  SLSAFNEMVGKLCRIEDVTRANEMLTNLLDEGFLADEITYSNLISGYAKNNQIQEMLKLY 466

Query: 542  YEMEYKSISPDAAAFNSLIVSLCHHKRLSEVEKFLMVMKDRQLRXXXXXXXXXXXXXXXK 721
            YEMEY+S+SP    F SLI  LC+  +L E EK+L +M  R L                K
Sbjct: 467  YEMEYRSLSPGLMGFTSLIKGLCNCGKLEEAEKYLRIMIGRSLNPREDVYEALIKVYFEK 526

Query: 722  RDKIRAQELCREMV 763
             DK RA  L  EMV
Sbjct: 527  GDKRRALNLYNEMV 540



 Score = 68.2 bits (165), Expect = 5e-09
 Identities = 46/214 (21%), Positives = 88/214 (41%)
 Frame = +2

Query: 20  RMLQNHMILDVIGCSLVVLAKLKKGDLEAAWEVFEGMLKRGFDGNSFVYTLFIGAYCDQR 199
           R+ ++   L +I  + ++    K      AW+++E ML R    N       I A C + 
Sbjct: 188 RLEEHRFTLSLISFNTLIHVVQKSDKSPLAWKIYEHMLHRRTYPNEATIESMISALCKEG 247

Query: 200 MIEDAVEVLEEMENSGFKPFDETFDCLIQGCCRTQWLEDSLKYCERMMEMGLVPSRLAFN 379
            ++  V +L+++      P      CL+        +E  L   + M+   ++   +A++
Sbjct: 248 KLQTIVNMLDKIHGKRCSPVVIVNTCLVFRILEEGRVEPGLALLKMMLRKNMILDTVAYS 307

Query: 380 EMTNKLCENGYSKRVDEMLTVLLDKGFVPDSITYSCLIAGYGKEGNVEDALKLYYEMEYK 559
            +     + G      ++   +L +GF  +S  Y+  I  Y KE  +E+A +L  EME  
Sbjct: 308 LIVYAKVKLGNLNSAMQVYEEMLKRGFNANSFVYTSFIGAYCKEERIEEANQLLQEMENM 367

Query: 560 SISPDAAAFNSLIVSLCHHKRLSEVEKFLMVMKD 661
            + P    FN L+       R+ E   +   M +
Sbjct: 368 GLKPYGDTFNFLLEGCAKAGRVEETLSYCKKMME 401


>ref|XP_002531188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223529229|gb|EEF31203.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 619

 Score =  241 bits (615), Expect = 3e-61
 Identities = 122/254 (48%), Positives = 165/254 (64%)
 Frame = +2

Query: 2    GLVLLKRMLQNHMILDVIGCSLVVLAKLKKGDLEAAWEVFEGMLKRGFDGNSFVYTLFIG 181
            G+ +LK MLQ +MILD +  SL+V AK++ G+L++A EV+E MLKRGF+ NSFV+T+ IG
Sbjct: 288  GIGILKGMLQKNMILDTVAYSLIVFAKVRLGNLDSALEVYEAMLKRGFNANSFVHTVLIG 347

Query: 182  AYCDQRMIEDAVEVLEEMENSGFKPFDETFDCLIQGCCRTQWLEDSLKYCERMMEMGLVP 361
            AYC+   IE A ++  EM   G +P+DETF+ LI+GC +   +E+ L Y E+M+E GLVP
Sbjct: 348  AYCNGGKIEKANQLFGEMGTMGLEPYDETFNFLIEGCAKAGRVEECLSYFEKMIERGLVP 407

Query: 362  SRLAFNEMTNKLCENGYSKRVDEMLTVLLDKGFVPDSITYSCLIAGYGKEGNVEDALKLY 541
            S LAFN+M  KLCE G   + +  LT LLDKGF PD  TYS L+ GY ++  +++ LKLY
Sbjct: 408  SLLAFNKMIAKLCETGEVNQANTFLTRLLDKGFSPDETTYSYLMTGYERDNQIQEVLKLY 467

Query: 542  YEMEYKSISPDAAAFNSLIVSLCHHKRLSEVEKFLMVMKDRQLRXXXXXXXXXXXXXXXK 721
            YEMEY+ +SP    F  LI SLCH  +L + EK+L +MK R L                K
Sbjct: 468  YEMEYRPLSPGLLVFTPLIRSLCHCGKLEQAEKYLRIMKGRSLNPSQQVYEALIAGHLEK 527

Query: 722  RDKIRAQELCREMV 763
             D  RA +L  EM+
Sbjct: 528  SDTARALQLYNEMI 541



 Score = 74.3 bits (181), Expect = 6e-11
 Identities = 44/162 (27%), Positives = 73/162 (45%)
 Frame = +2

Query: 86  KKGDLEAAWEVFEGMLKRGFDGNSFVYTLFIGAYCDQRMIEDAVEVLEEMENSGFKPFDE 265
           K G +E     FE M++RG   +   +   I   C+   +  A   L  + + GF P + 
Sbjct: 386 KAGRVEECLSYFEKMIERGLVPSLLAFNKMIAKLCETGEVNQANTFLTRLLDKGFSPDET 445

Query: 266 TFDCLIQGCCRTQWLEDSLKYCERMMEMGLVPSRLAFNEMTNKLCENGYSKRVDEMLTVL 445
           T+  L+ G  R   +++ LK    M    L P  L F  +   LC  G  ++ ++ L ++
Sbjct: 446 TYSYLMTGYERDNQIQEVLKLYYEMEYRPLSPGLLVFTPLIRSLCHCGKLEQAEKYLRIM 505

Query: 446 LDKGFVPDSITYSCLIAGYGKEGNVEDALKLYYEMEYKSISP 571
             +   P    Y  LIAG+ ++ +   AL+LY EM  K  +P
Sbjct: 506 KGRSLNPSQQVYEALIAGHLEKSDTARALQLYNEMISKGFTP 547



 Score = 61.2 bits (147), Expect = 6e-07
 Identities = 45/249 (18%), Positives = 94/249 (37%), Gaps = 36/249 (14%)
 Frame = +2

Query: 26  LQNH-MILDVIGCSLVVLAKLKKGDLEAAWEVFEGMLKRGFDGNSFVYTLFIGAYCDQRM 202
           L+ H   L ++  + ++    K       W+++E M+ +    N       I A C +  
Sbjct: 190 LEEHGFFLSLLSFNTLIHVVQKSDQYPLVWKIYEHMIHKRIYPNEATIRTMINALCKEGK 249

Query: 203 IEDAVEVLEEMENSGFKPFDETFDCLI----------------QGCCRTQWLEDSLKYC- 331
           ++  V++L+ +     +P      C++                +G  +   + D++ Y  
Sbjct: 250 LQMFVDILDRIHGKRCRPLVIINACMVFRILQEGRVDVGIGILKGMLQKNMILDTVAYSL 309

Query: 332 ------------------ERMMEMGLVPSRLAFNEMTNKLCENGYSKRVDEMLTVLLDKG 457
                             E M++ G   +      +    C  G  ++ +++   +   G
Sbjct: 310 IVFAKVRLGNLDSALEVYEAMLKRGFNANSFVHTVLIGAYCNGGKIEKANQLFGEMGTMG 369

Query: 458 FVPDSITYSCLIAGYGKEGNVEDALKLYYEMEYKSISPDAAAFNSLIVSLCHHKRLSEVE 637
             P   T++ LI G  K G VE+ L  + +M  + + P   AFN +I  LC    +++  
Sbjct: 370 LEPYDETFNFLIEGCAKAGRVEECLSYFEKMIERGLVPSLLAFNKMIAKLCETGEVNQAN 429

Query: 638 KFLMVMKDR 664
            FL  + D+
Sbjct: 430 TFLTRLLDK 438


>ref|XP_004140361.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
            mitochondrial-like [Cucumis sativus]
          Length = 517

 Score =  236 bits (601), Expect = 1e-59
 Identities = 118/254 (46%), Positives = 163/254 (64%)
 Frame = +2

Query: 2    GLVLLKRMLQNHMILDVIGCSLVVLAKLKKGDLEAAWEVFEGMLKRGFDGNSFVYTLFIG 181
            G+ LLKRMLQ +M+LD I  SL+V AK+K G + + WEVFE M +RGF  NSF+YTLFIG
Sbjct: 261  GITLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSTWEVFEEMSERGFQANSFIYTLFIG 320

Query: 182  AYCDQRMIEDAVEVLEEMENSGFKPFDETFDCLIQGCCRTQWLEDSLKYCERMMEMGLVP 361
             +C    +E+A  +++EMEN G KP+ ETF+ LI+GC  +   E+ L  CE+M+E G +P
Sbjct: 321  VHCRGGKVEEAHCLMQEMENMGLKPYPETFNLLIEGCAISGHSEEILSMCEKMLERGFLP 380

Query: 362  SRLAFNEMTNKLCENGYSKRVDEMLTVLLDKGFVPDSITYSCLIAGYGKEGNVEDALKLY 541
            S   FN   +K+CE G  K+ + +LT+LLDKGF+PD  TY+ LI GY K G +++ LKLY
Sbjct: 381  SCSVFNVAIDKICEKGDVKKANALLTILLDKGFLPDETTYTNLIIGYRKSGEIQEILKLY 440

Query: 542  YEMEYKSISPDAAAFNSLIVSLCHHKRLSEVEKFLMVMKDRQLRXXXXXXXXXXXXXXXK 721
            YEM  + +SP  + F +LI SLC   RL E EK+L ++KD  L                K
Sbjct: 441  YEMGARLLSPGVSVFFALIGSLCQSGRLEEAEKYLKIVKDSSLTPCLSIYQALILLYLKK 500

Query: 722  RDKIRAQELCREMV 763
             ++ +A EL  EM+
Sbjct: 501  GNRAKALELYNEMM 514



 Score = 67.4 bits (163), Expect = 8e-09
 Identities = 45/155 (29%), Positives = 75/155 (48%)
 Frame = +2

Query: 92  GDLEAAWEVFEGMLKRGFDGNSFVYTLFIGAYCDQRMIEDAVEVLEEMENSGFKPFDETF 271
           G  E    + E ML+RGF  +  V+ + I   C++  ++ A  +L  + + GF P + T+
Sbjct: 361 GHSEEILSMCEKMLERGFLPSCSVFNVAIDKICEKGDVKKANALLTILLDKGFLPDETTY 420

Query: 272 DCLIQGCCRTQWLEDSLKYCERMMEMGLVPSRLAFNEMTNKLCENGYSKRVDEMLTVLLD 451
             LI G  ++  +++ LK    M    L P    F  +   LC++G  +  ++ L ++ D
Sbjct: 421 TNLIIGYRKSGEIQEILKLYYEMGARLLSPGVSVFFALIGSLCQSGRLEEAEKYLKIVKD 480

Query: 452 KGFVPDSITYSCLIAGYGKEGNVEDALKLYYEMEY 556
               P    Y  LI  Y K+GN   AL+LY EM +
Sbjct: 481 SSLTPCLSIYQALILLYLKKGNRAKALELYNEMMF 515