BLASTX nr result

ID: Lithospermum22_contig00021293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00021293
         (689 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269873.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   170   2e-63
ref|XP_003536498.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   169   4e-61
ref|XP_002510890.1| dead box ATP-dependent RNA helicase, putativ...   171   4e-61
ref|XP_003556075.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   168   1e-60
gb|AAF40306.1|AF156667_1 RNA helicase [Vigna radiata]                 165   9e-60

>ref|XP_002269873.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Vitis
           vinifera]
          Length = 711

 Score =  170 bits (431), Expect(2) = 2e-63
 Identities = 90/121 (74%), Positives = 101/121 (83%), Gaps = 1/121 (0%)
 Frame = -3

Query: 564 KKKKVKLSDDVAREGEGEKE-NAVSTFRISKELREALKSKGIESLFPIQAMTFDMILDGD 388
           KKKK+K+ +    EG+ E+  NA+S FRIS+ LRE LKSKGIE+LFPIQAMTFD ILDG 
Sbjct: 98  KKKKLKVPEMEEEEGKAEENPNALSNFRISEPLREKLKSKGIEALFPIQAMTFDTILDGS 157

Query: 387 DLVGRARTGQGKTLAFVLPILESITNGPAQESRKTGYGRAPSVLVLLPTRELAKQVNADF 208
           DLVGRARTGQGKTLAFVLPILES+ NGP + SRKTGYGR P VLVLLPTRELA QV ADF
Sbjct: 158 DLVGRARTGQGKTLAFVLPILESLINGPNRGSRKTGYGRPPCVLVLLPTRELATQVYADF 217

Query: 207 E 205
           +
Sbjct: 218 D 218



 Score = 98.2 bits (243), Expect(2) = 2e-63
 Identities = 47/53 (88%), Positives = 49/53 (92%)
 Frame = -2

Query: 160 GGAPYQPQFSDLKRGVDIIIGTPGRIKDHIERGNIDFSSLKFRVLDEADEMLR 2
           GGAPYQ Q   LKRGVDI++GTPGRIKDHIERGNIDFSSLKFRVLDEADEMLR
Sbjct: 233 GGAPYQAQEIKLKRGVDIVVGTPGRIKDHIERGNIDFSSLKFRVLDEADEMLR 285


>ref|XP_003536498.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Glycine max]
          Length = 697

 Score =  169 bits (429), Expect(2) = 4e-61
 Identities = 92/128 (71%), Positives = 104/128 (81%), Gaps = 8/128 (6%)
 Frame = -3

Query: 564 KKKKVKLSDD-----VAREGEGEKE---NAVSTFRISKELREALKSKGIESLFPIQAMTF 409
           KKKKV  S++     +  E + EK+   NA+S FRIS+ LRE LK KGIESLFPIQAMTF
Sbjct: 90  KKKKVVKSEEKEQPLLVTEPKEEKKDDPNAISNFRISEPLREKLKEKGIESLFPIQAMTF 149

Query: 408 DMILDGDDLVGRARTGQGKTLAFVLPILESITNGPAQESRKTGYGRAPSVLVLLPTRELA 229
           D +LDG DLVGRARTGQGKTLAFVLPILES+ NGPA+ +RKTGYGR PSVLVLLPTRELA
Sbjct: 150 DTVLDGSDLVGRARTGQGKTLAFVLPILESLINGPAKSARKTGYGRTPSVLVLLPTRELA 209

Query: 228 KQVNADFE 205
            QV+ADFE
Sbjct: 210 CQVHADFE 217



 Score = 91.7 bits (226), Expect(2) = 4e-61
 Identities = 43/53 (81%), Positives = 47/53 (88%)
 Frame = -2

Query: 160 GGAPYQPQFSDLKRGVDIIIGTPGRIKDHIERGNIDFSSLKFRVLDEADEMLR 2
           GGAPYQ Q   L+RGVDI+IGTPGR+KDHIE+GNID S LKFRVLDEADEMLR
Sbjct: 232 GGAPYQGQELKLRRGVDIVIGTPGRVKDHIEKGNIDLSQLKFRVLDEADEMLR 284


>ref|XP_002510890.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223550005|gb|EEF51492.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 690

 Score =  171 bits (433), Expect(2) = 4e-61
 Identities = 95/136 (69%), Positives = 105/136 (77%), Gaps = 7/136 (5%)
 Frame = -3

Query: 591 ELIEATDLFKKKKVKLSDDVAREGEGEKE-------NAVSTFRISKELREALKSKGIESL 433
           EL+E  +L  KKK K +       +GE E       NA+S +RIS+ LRE LKSKGI+SL
Sbjct: 69  ELVEPVNLKTKKKNKKAKIADENEDGEVETAEEDHPNAISKYRISESLREKLKSKGIQSL 128

Query: 432 FPIQAMTFDMILDGDDLVGRARTGQGKTLAFVLPILESITNGPAQESRKTGYGRAPSVLV 253
           FPIQAMTFD ILDG DLVGRARTGQGKTLAFVLPILESITNG A+ESRKTGYGR PSVLV
Sbjct: 129 FPIQAMTFDDILDGSDLVGRARTGQGKTLAFVLPILESITNGHAKESRKTGYGRPPSVLV 188

Query: 252 LLPTRELAKQVNADFE 205
           LLPTRELA QV  DF+
Sbjct: 189 LLPTRELASQVFDDFK 204



 Score = 90.1 bits (222), Expect(2) = 4e-61
 Identities = 42/53 (79%), Positives = 46/53 (86%)
 Frame = -2

Query: 160 GGAPYQPQFSDLKRGVDIIIGTPGRIKDHIERGNIDFSSLKFRVLDEADEMLR 2
           GGA Y PQ   LKRGVDI++GTPGR+KDHIERGNI+ S LKFRVLDEADEMLR
Sbjct: 219 GGASYHPQEMSLKRGVDIVVGTPGRVKDHIERGNINLSYLKFRVLDEADEMLR 271


>ref|XP_003556075.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Glycine max]
          Length = 693

 Score =  168 bits (425), Expect(2) = 1e-60
 Identities = 90/127 (70%), Positives = 103/127 (81%), Gaps = 7/127 (5%)
 Frame = -3

Query: 564 KKKKVKLSDD----VAREGEGEKE---NAVSTFRISKELREALKSKGIESLFPIQAMTFD 406
           KKKKV  S++    +  E  GEK+   NA+S FRIS+ LR+ LK KGIESLFPIQAMTFD
Sbjct: 86  KKKKVVKSEEKEQPLVTEANGEKKEDPNALSNFRISEPLRQKLKEKGIESLFPIQAMTFD 145

Query: 405 MILDGDDLVGRARTGQGKTLAFVLPILESITNGPAQESRKTGYGRAPSVLVLLPTRELAK 226
            +LDG DLVGRARTGQGKTLAFVLPILES+ NGP + SRKTG+GR PSVLVLLPTRELA 
Sbjct: 146 TVLDGSDLVGRARTGQGKTLAFVLPILESLINGPTKASRKTGFGRTPSVLVLLPTRELAC 205

Query: 225 QVNADFE 205
           QV+ADF+
Sbjct: 206 QVHADFD 212



 Score = 91.7 bits (226), Expect(2) = 1e-60
 Identities = 43/53 (81%), Positives = 47/53 (88%)
 Frame = -2

Query: 160 GGAPYQPQFSDLKRGVDIIIGTPGRIKDHIERGNIDFSSLKFRVLDEADEMLR 2
           GGAPYQ Q   L+RGVDI+IGTPGR+KDHIE+GNID S LKFRVLDEADEMLR
Sbjct: 227 GGAPYQGQEIKLRRGVDIVIGTPGRVKDHIEKGNIDLSQLKFRVLDEADEMLR 279


>gb|AAF40306.1|AF156667_1 RNA helicase [Vigna radiata]
          Length = 713

 Score =  165 bits (418), Expect(2) = 9e-60
 Identities = 91/126 (72%), Positives = 100/126 (79%), Gaps = 6/126 (4%)
 Frame = -3

Query: 564 KKKKVKLSDDV----AREGEGEKE--NAVSTFRISKELREALKSKGIESLFPIQAMTFDM 403
           KKKK K  +      A E E +KE  NAVS  RIS+ LR  LK KGIESLFPIQAMTFD+
Sbjct: 103 KKKKAKSEEQPLVMEAEEKEEKKEDPNAVSKLRISEPLRLKLKEKGIESLFPIQAMTFDL 162

Query: 402 ILDGDDLVGRARTGQGKTLAFVLPILESITNGPAQESRKTGYGRAPSVLVLLPTRELAKQ 223
           +LDG DLVGRARTGQGKTLAFVLPILES+ NGP + SRKTGYGR PSVLVLLPTRELA +
Sbjct: 163 VLDGSDLVGRARTGQGKTLAFVLPILESLINGPTKSSRKTGYGRTPSVLVLLPTRELACR 222

Query: 222 VNADFE 205
           V+ADFE
Sbjct: 223 VHADFE 228



 Score = 91.3 bits (225), Expect(2) = 9e-60
 Identities = 43/53 (81%), Positives = 46/53 (86%)
 Frame = -2

Query: 160 GGAPYQPQFSDLKRGVDIIIGTPGRIKDHIERGNIDFSSLKFRVLDEADEMLR 2
           GGAPY  Q   L+RGVDI+IGTPGR+KDHIERGNID S LKFRVLDEADEMLR
Sbjct: 243 GGAPYNTQEIKLRRGVDIVIGTPGRVKDHIERGNIDLSQLKFRVLDEADEMLR 295


Top