BLASTX nr result
ID: Lithospermum22_contig00021275
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00021275
(1312 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containi... 400 e-109
emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera] 400 e-109
ref|XP_002329310.1| predicted protein [Populus trichocarpa] gi|2... 395 e-107
ref|XP_002532893.1| pentatricopeptide repeat-containing protein,... 386 e-105
ref|XP_004140465.1| PREDICTED: pentatricopeptide repeat-containi... 367 4e-99
>ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein At5g38730-like
[Vitis vinifera]
Length = 590
Score = 400 bits (1029), Expect = e-109
Identities = 189/308 (61%), Positives = 249/308 (80%)
Frame = +3
Query: 3 RERRMREALRLFKEMEGVAPNQVTYTTLIDGYCRVNDLDEALRLREEMEAKGLYAGVVTY 182
RE RMREALRLF+E+ G PN VTYTTLIDGYCRVNDL+EALRLRE ME +GL+ GVVTY
Sbjct: 279 REGRMREALRLFREINGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTY 338
Query: 183 NSILRKLCEEGRLKDANRLLIEMGEKKIEPDNITCNTLINAYSKIGDMASAVRVKDRMVA 362
NSILRKLCEEG++KDANRLL EM E+K+EPDN+TCNTLINAY KIGDM SA++VK +M+
Sbjct: 339 NSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLE 398
Query: 363 AGMNPDVFTYKALTHGFCRAKEINSAKEMLFTMLGAGLVPSYYTYSWLVDTYCNQGDDDS 542
AG+ PD FT+KAL HGFC+ E++SAKE LF ML AG PSY TYSWLVD+Y +Q + ++
Sbjct: 399 AGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEA 458
Query: 543 IIKLIDEFSERGIYVDTSIFRAIIRQLCKREKVDCAEQVYAIMRAKRVLADSIVHTSLAY 722
+I+L DE S +G++VD S++RA+IR+LCK +K++ AE+++ +M+ K + DS+V+TSLAY
Sbjct: 459 VIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAY 518
Query: 723 AYLKVGNMISATQHLDEMYKKRLMISLDIYKSFSASYSDQKNFLDVLWDTMLQKGLMSKP 902
AY K G I+A+ LDEM K+RLMI+L IY+ FSASY+ + L + WD ++++ L+SK
Sbjct: 519 AYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSILGLFWDHVIERRLISKN 578
Query: 903 VYNHIKQL 926
+ +I+QL
Sbjct: 579 ILKYIQQL 586
Score = 131 bits (329), Expect = 4e-28
Identities = 75/263 (28%), Positives = 140/263 (53%), Gaps = 2/263 (0%)
Frame = +3
Query: 9 RRMREALRLFKEME--GVAPNQVTYTTLIDGYCRVNDLDEALRLREEMEAKGLYAGVVTY 182
R ++A+++F+ M G P+ T L++ + + ++ ++M G+ + +
Sbjct: 141 RMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIF 200
Query: 183 NSILRKLCEEGRLKDANRLLIEMGEKKIEPDNITCNTLINAYSKIGDMASAVRVKDRMVA 362
N ++ C+ G ++ A +LL EM + I PD T NTLI+ Y K G A+ ++DRM
Sbjct: 201 NVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMER 260
Query: 363 AGMNPDVFTYKALTHGFCRAKEINSAKEMLFTMLGAGLVPSYYTYSWLVDTYCNQGDDDS 542
G++PD+ TY +L +GFCR + A + + GA P++ TY+ L+D YC D +
Sbjct: 261 GGVSPDIVTYNSLIYGFCREGRMREALRLFREINGA--TPNHVTYTTLIDGYCRVNDLEE 318
Query: 543 IIKLIDEFSERGIYVDTSIFRAIIRQLCKREKVDCAEQVYAIMRAKRVLADSIVHTSLAY 722
++L + G++ + +I+R+LC+ K+ A ++ M ++V D++ +L
Sbjct: 319 ALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLIN 378
Query: 723 AYLKVGNMISATQHLDEMYKKRL 791
AY K+G+M SA + +M + L
Sbjct: 379 AYCKIGDMGSAMKVKKKMLEAGL 401
>emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 400 bits (1029), Expect = e-109
Identities = 189/308 (61%), Positives = 249/308 (80%)
Frame = +3
Query: 3 RERRMREALRLFKEMEGVAPNQVTYTTLIDGYCRVNDLDEALRLREEMEAKGLYAGVVTY 182
RE RMREALRLF+E+ G PN VTYTTLIDGYCRVNDL+EALRLRE ME +GL+ GVVTY
Sbjct: 279 REGRMREALRLFREINGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTY 338
Query: 183 NSILRKLCEEGRLKDANRLLIEMGEKKIEPDNITCNTLINAYSKIGDMASAVRVKDRMVA 362
NSILRKLCEEG++KDANRLL EM E+K+EPDN+TCNTLINAY KIGDM SA++VK +M+
Sbjct: 339 NSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLE 398
Query: 363 AGMNPDVFTYKALTHGFCRAKEINSAKEMLFTMLGAGLVPSYYTYSWLVDTYCNQGDDDS 542
AG+ PD FT+KAL HGFC+ E++SAKE LF ML AG PSY TYSWLVD+Y +Q + ++
Sbjct: 399 AGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEA 458
Query: 543 IIKLIDEFSERGIYVDTSIFRAIIRQLCKREKVDCAEQVYAIMRAKRVLADSIVHTSLAY 722
+I+L DE S +G++VD S++RA+IR+LCK +K++ AE+++ +M+ K + DS+V+TSLAY
Sbjct: 459 VIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAY 518
Query: 723 AYLKVGNMISATQHLDEMYKKRLMISLDIYKSFSASYSDQKNFLDVLWDTMLQKGLMSKP 902
AY K G I+A+ LDEM K+RLMI+L IY+ FSASY+ + L + WD ++++ L+SK
Sbjct: 519 AYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSILGLFWDHVIERRLISKN 578
Query: 903 VYNHIKQL 926
+ +I+QL
Sbjct: 579 ILKYIQQL 586
Score = 131 bits (329), Expect = 4e-28
Identities = 75/263 (28%), Positives = 140/263 (53%), Gaps = 2/263 (0%)
Frame = +3
Query: 9 RRMREALRLFKEME--GVAPNQVTYTTLIDGYCRVNDLDEALRLREEMEAKGLYAGVVTY 182
R ++A+++F+ M G P+ T L++ + + ++ ++M G+ + +
Sbjct: 141 RMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIF 200
Query: 183 NSILRKLCEEGRLKDANRLLIEMGEKKIEPDNITCNTLINAYSKIGDMASAVRVKDRMVA 362
N ++ C+ G ++ A +LL EM + I PD T NTLI+ Y K G A+ ++DRM
Sbjct: 201 NVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMER 260
Query: 363 AGMNPDVFTYKALTHGFCRAKEINSAKEMLFTMLGAGLVPSYYTYSWLVDTYCNQGDDDS 542
G++PD+ TY +L +GFCR + A + + GA P++ TY+ L+D YC D +
Sbjct: 261 GGVSPDIVTYNSLIYGFCREGRMREALRLFREINGA--TPNHVTYTTLIDGYCRVNDLEE 318
Query: 543 IIKLIDEFSERGIYVDTSIFRAIIRQLCKREKVDCAEQVYAIMRAKRVLADSIVHTSLAY 722
++L + G++ + +I+R+LC+ K+ A ++ M ++V D++ +L
Sbjct: 319 ALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLIN 378
Query: 723 AYLKVGNMISATQHLDEMYKKRL 791
AY K+G+M SA + +M + L
Sbjct: 379 AYCKIGDMGSAMKVKKKMLEAGL 401
>ref|XP_002329310.1| predicted protein [Populus trichocarpa] gi|222870764|gb|EEF07895.1|
predicted protein [Populus trichocarpa]
Length = 593
Score = 395 bits (1015), Expect = e-107
Identities = 189/301 (62%), Positives = 241/301 (80%)
Frame = +3
Query: 3 RERRMREALRLFKEMEGVAPNQVTYTTLIDGYCRVNDLDEALRLREEMEAKGLYAGVVTY 182
RE RMREA++LF++++ V PN VTYT+LIDGYCRVNDLDEALRL+E M KGLY V+TY
Sbjct: 288 REGRMREAVQLFRDIKDVTPNHVTYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVITY 347
Query: 183 NSILRKLCEEGRLKDANRLLIEMGEKKIEPDNITCNTLINAYSKIGDMASAVRVKDRMVA 362
NSILRKLCE GRL+DAN LL EM E+KIEPDN+TCNTLINAY KIGDM SA++VKD+MV
Sbjct: 348 NSILRKLCEGGRLRDANILLNEMSERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVG 407
Query: 363 AGMNPDVFTYKALTHGFCRAKEINSAKEMLFTMLGAGLVPSYYTYSWLVDTYCNQGDDDS 542
AG+ D FTYKAL HGFC+AKEI+ AKE+LF M+ AG PSY TYSWLVD+YC Q ++++
Sbjct: 408 AGLKLDQFTYKALIHGFCKAKEIDKAKELLFGMMDAGFSPSYCTYSWLVDSYCKQQNEEA 467
Query: 543 IIKLIDEFSERGIYVDTSIFRAIIRQLCKREKVDCAEQVYAIMRAKRVLADSIVHTSLAY 722
+IKL DE RG+ VD S++RA+IR+ CK EK+DCA++V +M+ K + DS+V+TSLAY
Sbjct: 468 VIKLPDELVRRGLCVDVSVYRALIRRFCKIEKIDCAQRVLGLMKDKGIFGDSVVYTSLAY 527
Query: 723 AYLKVGNMISATQHLDEMYKKRLMISLDIYKSFSASYSDQKNFLDVLWDTMLQKGLMSKP 902
Y KVG + + LDEMYKKRLMI+L IY+SF+ASY+ + L + W+ +L++ LMSK
Sbjct: 528 GYWKVGKVNVTSDILDEMYKKRLMITLKIYRSFNASYASDNSILSLFWNHVLERRLMSKN 587
Query: 903 V 905
+
Sbjct: 588 I 588
Score = 147 bits (371), Expect = 6e-33
Identities = 85/277 (30%), Positives = 149/277 (53%), Gaps = 2/277 (0%)
Frame = +3
Query: 21 EALRLFKEME--GVAPNQVTYTTLIDGYCRVNDLDEALRLREEMEAKGLYAGVVTYNSIL 194
EA+++F+ M G P+ T L++ + D ++ ++M G+ A + YN +L
Sbjct: 154 EAIQVFEHMRVNGFRPHLHACTVLLNSLAKDRLTDTVWKIYKKMVKLGVVANIHVYNVLL 213
Query: 195 RKLCEEGRLKDANRLLIEMGEKKIEPDNITCNTLINAYSKIGDMASAVRVKDRMVAAGMN 374
C+ G ++ A ++L EM K + PD T NTLI+ Y K G A+ V+DRM AG++
Sbjct: 214 HACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEMAGIS 273
Query: 375 PDVFTYKALTHGFCRAKEINSAKEMLFTMLGAGLVPSYYTYSWLVDTYCNQGDDDSIIKL 554
PD+FTY +L +GFCR + A ++ + + P++ TY+ L+D YC D D ++L
Sbjct: 274 PDIFTYNSLIYGFCREGRMREAVQLFRDI--KDVTPNHVTYTSLIDGYCRVNDLDEALRL 331
Query: 555 IDEFSERGIYVDTSIFRAIIRQLCKREKVDCAEQVYAIMRAKRVLADSIVHTSLAYAYLK 734
+ SE+G+Y + +I+R+LC+ ++ A + M +++ D++ +L AY K
Sbjct: 332 KEVMSEKGLYPTVITYNSILRKLCEGGRLRDANILLNEMSERKIEPDNVTCNTLINAYCK 391
Query: 735 VGNMISATQHLDEMYKKRLMISLDIYKSFSASYSDQK 845
+G+M SA + D+M L + YK+ + K
Sbjct: 392 IGDMRSALKVKDKMVGAGLKLDQFTYKALIHGFCKAK 428
>ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527353|gb|EEF29498.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 625
Score = 386 bits (991), Expect = e-105
Identities = 182/289 (62%), Positives = 237/289 (82%)
Frame = +3
Query: 3 RERRMREALRLFKEMEGVAPNQVTYTTLIDGYCRVNDLDEALRLREEMEAKGLYAGVVTY 182
+E RMREA+RLFKE+ PN VTYTTLIDGYCR+NDLD+ALRLREEMEA+GLY VVTY
Sbjct: 282 KEGRMREAMRLFKEIRDATPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTY 341
Query: 183 NSILRKLCEEGRLKDANRLLIEMGEKKIEPDNITCNTLINAYSKIGDMASAVRVKDRMVA 362
NSILRKLCE GR++DAN+LL EM EKKIEPDN+TCNTLINAY KIGDM SA++VK+RMV
Sbjct: 342 NSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVE 401
Query: 363 AGMNPDVFTYKALTHGFCRAKEINSAKEMLFTMLGAGLVPSYYTYSWLVDTYCNQGDDDS 542
AG+ D FTYKAL HGFC+ +E++ AKE+L +ML AG PSY TYSWLVD YCNQ ++++
Sbjct: 402 AGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEA 461
Query: 543 IIKLIDEFSERGIYVDTSIFRAIIRQLCKREKVDCAEQVYAIMRAKRVLADSIVHTSLAY 722
++KL DEF +G+ VD S++RA+IR+ CKRE+VD A++++++M+ K L DS+++TSLAY
Sbjct: 462 VLKLPDEFVRKGLCVDKSLYRALIRRFCKREQVDYAKKIFSLMQEKGTLGDSVIYTSLAY 521
Query: 723 AYLKVGNMISATQHLDEMYKKRLMISLDIYKSFSASYSDQKNFLDVLWD 869
AY K+G +A+ LDEMYK+RLMI+L IY++ +ASY+ + L + W+
Sbjct: 522 AYWKLGKANAASDLLDEMYKRRLMITLKIYRALNASYAGDNSILSLFWN 570
Score = 144 bits (364), Expect = 4e-32
Identities = 82/269 (30%), Positives = 144/269 (53%), Gaps = 2/269 (0%)
Frame = +3
Query: 18 REALRLFKEM--EGVAPNQVTYTTLIDGYCRVNDLDEALRLREEMEAKGLYAGVVTYNSI 191
+EA+++F+ M G P+ T L++ + D ++ ++M G+ A + YN +
Sbjct: 147 QEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVL 206
Query: 192 LRKLCEEGRLKDANRLLIEMGEKKIEPDNITCNTLINAYSKIGDMASAVRVKDRMVAAGM 371
+ C+ G ++ A+ LL EM K + PD T NTLI+ Y K G A+ V+DRM G+
Sbjct: 207 IHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGI 266
Query: 372 NPDVFTYKALTHGFCRAKEINSAKEMLFTMLGAGLVPSYYTYSWLVDTYCNQGDDDSIIK 551
PD+ TY +L HGFC+ + A + + A P++ TY+ L+D YC D D ++
Sbjct: 267 KPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDA--TPNHVTYTTLIDGYCRLNDLDQALR 324
Query: 552 LIDEFSERGIYVDTSIFRAIIRQLCKREKVDCAEQVYAIMRAKRVLADSIVHTSLAYAYL 731
L +E +G+Y + +I+R+LC+ ++ A ++ M K++ D++ +L AY
Sbjct: 325 LREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYC 384
Query: 732 KVGNMISATQHLDEMYKKRLMISLDIYKS 818
K+G+M SA + + M + L + YK+
Sbjct: 385 KIGDMKSALKVKNRMVEAGLKLDQFTYKA 413
>ref|XP_004140465.1| PREDICTED: pentatricopeptide repeat-containing protein At5g38730-like
[Cucumis sativus] gi|449518107|ref|XP_004166085.1|
PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Cucumis sativus]
Length = 578
Score = 367 bits (942), Expect = 4e-99
Identities = 174/307 (56%), Positives = 235/307 (76%)
Frame = +3
Query: 3 RERRMREALRLFKEMEGVAPNQVTYTTLIDGYCRVNDLDEALRLREEMEAKGLYAGVVTY 182
+E +MREA++LF+E++ V+PN VTYTTLIDGYCRVND +EALRL + MEAKGL+ GV TY
Sbjct: 272 KEGKMREAVKLFREIKDVSPNHVTYTTLIDGYCRVNDFEEALRLCKVMEAKGLHLGVATY 331
Query: 183 NSILRKLCEEGRLKDANRLLIEMGEKKIEPDNITCNTLINAYSKIGDMASAVRVKDRMVA 362
NS+LRKLCEEGR++DAN+LL EMGE+K+EPDN+TCNTLINAY KIGDM SA++VK +M+
Sbjct: 332 NSVLRKLCEEGRIRDANKLLNEMGERKVEPDNVTCNTLINAYCKIGDMKSALKVKSKMLD 391
Query: 363 AGMNPDVFTYKALTHGFCRAKEINSAKEMLFTMLGAGLVPSYYTYSWLVDTYCNQGDDDS 542
AG+ D FTYKAL HGFC +++ SAKE+LF ML GL P Y TYSWLVD YC G++ +
Sbjct: 392 AGLQLDSFTYKALIHGFCWVRDMESAKELLFCMLDVGLSPGYCTYSWLVDGYCELGNEGA 451
Query: 543 IIKLIDEFSERGIYVDTSIFRAIIRQLCKREKVDCAEQVYAIMRAKRVLADSIVHTSLAY 722
II L+DEF +G VD S+ RA+IR+LC +E+V AE++Y+ M + V DS+++TSLAY
Sbjct: 452 IISLLDEFLTKGYCVDLSVCRALIRRLCHQERVGFAEKIYSTMHLRGVSGDSVIYTSLAY 511
Query: 723 AYLKVGNMISATQHLDEMYKKRLMISLDIYKSFSASYSDQKNFLDVLWDTMLQKGLMSKP 902
AY K G ++ L EM K+ L+I+L +Y+ F+ASY + L + WD + ++GL+SK
Sbjct: 512 AYWKDGKSNLVSEMLSEMTKRSLLINLKLYRCFNASYGPHNSILHLFWDHVAERGLLSKS 571
Query: 903 VYNHIKQ 923
+ I++
Sbjct: 572 ITKEIQK 578
Score = 130 bits (328), Expect = 6e-28
Identities = 71/261 (27%), Positives = 138/261 (52%)
Frame = +3
Query: 36 FKEMEGVAPNQVTYTTLIDGYCRVNDLDEALRLREEMEAKGLYAGVVTYNSILRKLCEEG 215
+ + G PN T L++ + D + ++M G+ + YN ++ C+ G
Sbjct: 145 YMRLHGFKPNLHACTVLLNSLAKDRLTDTVWKSYKKMIRVGVVPNIHIYNVLIHACCKSG 204
Query: 216 RLKDANRLLIEMGEKKIEPDNITCNTLINAYSKIGDMASAVRVKDRMVAAGMNPDVFTYK 395
++ A +L+ EM K + PD T NTLI+ YS+ A+ V+DRM AG++PD+ TY
Sbjct: 205 DVEKAEQLVCEMELKSVFPDLYTYNTLISLYSRKSLHYEALCVQDRMERAGVSPDIVTYN 264
Query: 396 ALTHGFCRAKEINSAKEMLFTMLGAGLVPSYYTYSWLVDTYCNQGDDDSIIKLIDEFSER 575
+L +GFC+ ++ A ++ + + P++ TY+ L+D YC D + ++L +
Sbjct: 265 SLIYGFCKEGKMREAVKLFREI--KDVSPNHVTYTTLIDGYCRVNDFEEALRLCKVMEAK 322
Query: 576 GIYVDTSIFRAIIRQLCKREKVDCAEQVYAIMRAKRVLADSIVHTSLAYAYLKVGNMISA 755
G+++ + + +++R+LC+ ++ A ++ M ++V D++ +L AY K+G+M SA
Sbjct: 323 GLHLGVATYNSVLRKLCEEGRIRDANKLLNEMGERKVEPDNVTCNTLINAYCKIGDMKSA 382
Query: 756 TQHLDEMYKKRLMISLDIYKS 818
+ +M L + YK+
Sbjct: 383 LKVKSKMLDAGLQLDSFTYKA 403