BLASTX nr result

ID: Lithospermum22_contig00021082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00021082
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30524.3| unnamed protein product [Vitis vinifera]               67   3e-09
ref|XP_002315214.1| predicted protein [Populus trichocarpa] gi|2...    66   4e-09
ref|XP_002269373.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    65   7e-09
emb|CAN82964.1| hypothetical protein VITISV_000345 [Vitis vinifera]    65   7e-09
ref|XP_004143127.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    65   9e-09

>emb|CBI30524.3| unnamed protein product [Vitis vinifera]
          Length = 470

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
 Frame = -1

Query: 192 NQQKFAFLFQIHTSFLFDRSENLSGKNHMSIS-SSYWCYRCNRFIRVWNQDSVSCPDCNG 16
           N  +F  +  +    L   +E+ S +  M+ S SS+WCYRCNRFIRVW QD++ CPDC  
Sbjct: 116 NNPRFRSILNLDIDLL--DAEDRSIREMMAASGSSFWCYRCNRFIRVWAQDAILCPDCGS 173

Query: 15  GFVEE 1
           GFVE+
Sbjct: 174 GFVEQ 178


>ref|XP_002315214.1| predicted protein [Populus trichocarpa] gi|222864254|gb|EEF01385.1|
           predicted protein [Populus trichocarpa]
          Length = 388

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 23/31 (74%), Positives = 28/31 (90%)
 Frame = -1

Query: 93  SYWCYRCNRFIRVWNQDSVSCPDCNGGFVEE 1
           SYWCYRCNRF++VW QDSV+CP+C  GF+EE
Sbjct: 8   SYWCYRCNRFVQVWRQDSVTCPECESGFIEE 38


>ref|XP_002269373.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 2 [Vitis
           vinifera]
          Length = 365

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 24/32 (75%), Positives = 28/32 (87%)
 Frame = -1

Query: 96  SSYWCYRCNRFIRVWNQDSVSCPDCNGGFVEE 1
           SS+WCYRCNRFIRVW QD++ CPDC  GFVE+
Sbjct: 7   SSFWCYRCNRFIRVWAQDAILCPDCGSGFVEQ 38


>emb|CAN82964.1| hypothetical protein VITISV_000345 [Vitis vinifera]
          Length = 364

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 24/32 (75%), Positives = 28/32 (87%)
 Frame = -1

Query: 96  SSYWCYRCNRFIRVWNQDSVSCPDCNGGFVEE 1
           SS+WCYRCNRFIRVW QD++ CPDC  GFVE+
Sbjct: 6   SSFWCYRCNRFIRVWAQDAILCPDCGSGFVEQ 37


>ref|XP_004143127.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
           gi|449527992|ref|XP_004170991.1| PREDICTED: E3
           ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 378

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 23/32 (71%), Positives = 29/32 (90%)
 Frame = -1

Query: 99  SSSYWCYRCNRFIRVWNQDSVSCPDCNGGFVE 4
           ++SYWCYRCNRF+R W QDS++CP C+GGFVE
Sbjct: 5   TASYWCYRCNRFVRAWAQDSITCPYCDGGFVE 36


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