BLASTX nr result

ID: Lithospermum22_contig00021079 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00021079
         (1514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27748.3| unnamed protein product [Vitis vinifera]              300   9e-79
ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein lig...   299   1e-78
ref|XP_002324718.1| predicted protein [Populus trichocarpa] gi|2...   287   6e-75
ref|XP_003533804.1| PREDICTED: putative uncharacterized protein ...   274   4e-71
ref|NP_190937.1| RING/U-box domain-containing protein [Arabidops...   272   2e-70

>emb|CBI27748.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  300 bits (767), Expect = 9e-79
 Identities = 132/215 (61%), Positives = 155/215 (72%), Gaps = 2/215 (0%)
 Frame = +3

Query: 576  PPVFICEICTDSIPVHDKFRIKDCGHFYCSMCVAHYVASKIEENVTRISCPVSGCHGTLE 755
            PP F+CEIC D  P++  F IK C H YCS C+  YVASK+++NV+RISCP   C G LE
Sbjct: 120  PPTFVCEICIDPKPLNHSFSIKGCPHSYCSDCMTKYVASKLQDNVSRISCPAPNCTGVLE 179

Query: 756  PQNCRGILPKQVFDRWGDALCEGVILDCQKFYCPFKDCSALLIXXXXXXXXXXXVIRESE 935
            PQ CR ILP  VFDRWG+ALCE +IL  QKFYCP+KDCSALLI           VI+ESE
Sbjct: 180  PQQCRPILPSHVFDRWGNALCEALILGSQKFYCPYKDCSALLI------RDEGEVIKESE 233

Query: 936  CPNCRRLFCVQCKVPWHPDVDCADFQKLNVDEREREDILLINLAKNKSWTRCPKCKFYVE 1115
            CPNCRRLFC QC+VPWH  +DC +FQKLN DER REDIL++NLAK  +W RCPKCKFYVE
Sbjct: 234  CPNCRRLFCAQCEVPWHSGIDCGEFQKLNKDERGREDILMMNLAKTNNWKRCPKCKFYVE 293

Query: 1116 RIDGCFFIHCRCGYNFCYSCG--GHLTDHYCQVCK 1214
            +  GC +I CRCG+ FCY+CG       H C  C+
Sbjct: 294  KSFGCMYIRCRCGFAFCYNCGAPSSTISHICPHCR 328


>ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-B-like [Vitis
            vinifera]
          Length = 358

 Score =  299 bits (765), Expect = 1e-78
 Identities = 132/214 (61%), Positives = 154/214 (71%), Gaps = 2/214 (0%)
 Frame = +3

Query: 576  PPVFICEICTDSIPVHDKFRIKDCGHFYCSMCVAHYVASKIEENVTRISCPVSGCHGTLE 755
            PP F+CEIC D  P++  F IK C H YCS C+  YVASK+++NV+RISCP   C G LE
Sbjct: 120  PPTFVCEICIDPKPLNHSFSIKGCPHSYCSDCMTKYVASKLQDNVSRISCPAPNCTGVLE 179

Query: 756  PQNCRGILPKQVFDRWGDALCEGVILDCQKFYCPFKDCSALLIXXXXXXXXXXXVIRESE 935
            PQ CR ILP  VFDRWG+ALCE +IL  QKFYCP+KDCSALLI           VI+ESE
Sbjct: 180  PQQCRPILPSHVFDRWGNALCEALILGSQKFYCPYKDCSALLI------RDEGEVIKESE 233

Query: 936  CPNCRRLFCVQCKVPWHPDVDCADFQKLNVDEREREDILLINLAKNKSWTRCPKCKFYVE 1115
            CPNCRRLFC QC+VPWH  +DC +FQKLN DER REDIL++NLAK  +W RCPKCKFYVE
Sbjct: 234  CPNCRRLFCAQCEVPWHSGIDCGEFQKLNKDERGREDILMMNLAKTNNWKRCPKCKFYVE 293

Query: 1116 RIDGCFFIHCRCGYNFCYSCG--GHLTDHYCQVC 1211
            +  GC +I CRCG+ FCY+CG       H C  C
Sbjct: 294  KSFGCMYIRCRCGFAFCYNCGAPSSTISHICPHC 327


>ref|XP_002324718.1| predicted protein [Populus trichocarpa] gi|222866152|gb|EEF03283.1|
            predicted protein [Populus trichocarpa]
          Length = 307

 Score =  287 bits (734), Expect = 6e-75
 Identities = 122/215 (56%), Positives = 157/215 (73%), Gaps = 3/215 (1%)
 Frame = +3

Query: 579  PVFICEICTDSIPVHDKFRIKDCGHFYCSMCVAHYVASKIEENVTRISCPVSGCHGTLEP 758
            P F+C+IC +   + + F IK C H YC+ C+  YV+SK++EN+T+I CPV  C G LEP
Sbjct: 96   PDFVCQICVEPTILKNSFLIKGCTHAYCTECMVKYVSSKLQENITKICCPVPDCKGALEP 155

Query: 759  QNCRGILPKQVFDRWGDALCEGVILDCQKFYCPFKDCSALLIXXXXXXXXXXXVIRESEC 938
            ++CR +LP+ VFDRWG+ALCE VIL  QKFYCPFKDCSA+LI           V+RESEC
Sbjct: 156  EDCRSVLPENVFDRWGNALCEAVILGSQKFYCPFKDCSAMLIDDGEE------VVRESEC 209

Query: 939  PNCRRLFCVQCKVPWHPDVDCADFQKLNVDEREREDILLINLAKNKSWTRCPKCKFYVER 1118
            PNC R+FC QCKVPWH  + C +++ L+ DERER+DILL+NLAKNK+W RCPKC+ +VE+
Sbjct: 210  PNCWRMFCAQCKVPWHSQISCEEYKMLHKDERERDDILLMNLAKNKNWRRCPKCRIFVEK 269

Query: 1119 IDGCFFIHCRCGYNFCYSCGG---HLTDHYCQVCK 1214
            I+GC ++ CRCG  FCYSCG    +   HYC  CK
Sbjct: 270  IEGCRYMKCRCGTQFCYSCGSTDLNPVTHYCYKCK 304


>ref|XP_003533804.1| PREDICTED: putative uncharacterized protein At4g01020,
            chloroplastic-like [Glycine max]
          Length = 333

 Score =  274 bits (701), Expect = 4e-71
 Identities = 129/244 (52%), Positives = 155/244 (63%), Gaps = 2/244 (0%)
 Frame = +3

Query: 492  KSLFVGECSNSKAGNRITIEIDDELGNYPPVFICEICTDSIPVHDKFRIKDCGHFYCSMC 671
            KS   GECSNS +                  F+CEICT++    D F I  C H YC+ C
Sbjct: 113  KSSSKGECSNSAS------------------FVCEICTETKTARDSFSIIGCHHVYCNSC 154

Query: 672  VAHYVASKIEENVTRISCPVSGCHGTLEPQNCRGILPKQVFDRWGDALCEGVILDCQKFY 851
            VA YV SK+EEN+  I CPV GC G LE  +CR IL  +VFDRWG ALCE VI   +KFY
Sbjct: 155  VAQYVESKLEENIVSIPCPVPGCRGLLEADDCREILAPRVFDRWGKALCEAVIAAEEKFY 214

Query: 852  CPFKDCSALLIXXXXXXXXXXXVIRESECPNCRRLFCVQCKVPWHPDVDCADFQKLNVDE 1031
            CPF DCS +LI            IRE+ECPNCRRLFC QC+VPWH ++ C DFQKLN DE
Sbjct: 215  CPFADCSVMLIRGIEENN-----IREAECPNCRRLFCAQCRVPWHDNMPCEDFQKLNADE 269

Query: 1032 REREDILLINLAKNKSWTRCPKCKFYVERIDGCFFIHCRCGYNFCYSCGG-HLT-DHYCQ 1205
            R++EDI+L+NLA    W RCP+C+FYV + DGC ++ CRCG  FCY+CG  +LT  H C 
Sbjct: 270  RDKEDIMLMNLANQMQWKRCPRCRFYVAKSDGCMYMKCRCGNAFCYNCGAPNLTSSHSCS 329

Query: 1206 VCKR 1217
             C R
Sbjct: 330  YCFR 333


>ref|NP_190937.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
            gi|6729520|emb|CAB67676.1| putative protein [Arabidopsis
            thaliana] gi|21536688|gb|AAM61020.1| unknown [Arabidopsis
            thaliana] gi|332645607|gb|AEE79128.1| RING/U-box
            domain-containing protein [Arabidopsis thaliana]
          Length = 320

 Score =  272 bits (695), Expect = 2e-70
 Identities = 115/213 (53%), Positives = 148/213 (69%), Gaps = 2/213 (0%)
 Frame = +3

Query: 585  FICEICTDSIPVHDKFRIKDCGHFYCSMCVAHYVASKIEENVTRISCPVSGCHGTLEPQN 764
            F CEIC DS  + + FRI  C HFYC+ CV+ Y+A+K+++N+  I CPVSGC G LEP  
Sbjct: 113  FDCEICVDSKSIIESFRIGGCSHFYCNDCVSKYIAAKLQDNILSIECPVSGCSGRLEPDQ 172

Query: 765  CRGILPKQVFDRWGDALCEGVILDCQKFYCPFKDCSALLIXXXXXXXXXXXVIRESECPN 944
            CR ILPK+VFDRWGDALCE V++  +KFYCP+KDCSAL+             +++SECP+
Sbjct: 173  CRQILPKEVFDRWGDALCEAVVMRSKKFYCPYKDCSALVFLEESEVK-----MKDSECPH 227

Query: 945  CRRLFCVQCKVPWHPDVDCADFQKLNVDEREREDILLINLAKNKSWTRCPKCKFYVERID 1124
            C R+ CV+C   WHP++ C +FQKL  +ER R+DILL  +AK K W RCP CKFY+E+  
Sbjct: 228  CHRMVCVECGTQWHPEMTCEEFQKLAANERGRDDILLATMAKQKKWKRCPSCKFYIEKSQ 287

Query: 1125 GCFFIHCRCGYNFCYSCGGHLTD--HYCQVCKR 1217
            GC ++ CRCG  FCY+CG    D  HYC  CKR
Sbjct: 288  GCLYMKCRCGLAFCYNCGTPSRDHTHYCYNCKR 320


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