BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00021040
         (803 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140847.1| PREDICTED: DNA mismatch repair protein MSH3-...   268   1e-69
ref|XP_004168537.1| PREDICTED: DNA mismatch repair protein MSH3-...   267   2e-69
ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-...   266   5e-69
emb|CBI37346.3| unnamed protein product [Vitis vinifera]              266   5e-69
emb|CBI29513.3| unnamed protein product [Vitis vinifera]              265   9e-69

>ref|XP_004140847.1| PREDICTED: DNA mismatch repair protein MSH3-like [Cucumis sativus]
          Length = 1094

 Score =  268 bits (685), Expect = 1e-69
 Identities = 147/253 (58%), Positives = 181/253 (71%), Gaps = 17/253 (6%)
 Frame = -3

Query: 708 MGKQKQQIISRFFSXXXXXXXXXXXXTNATVTPPKISTTATFSPSKRLR----ATQLTSP 541
           MGKQKQQ+ISRFF+             +++ +P K+S T TFSPSKRL     A+QLT P
Sbjct: 1   MGKQKQQVISRFFAPKPKSPSLS----SSSSSPAKVSATVTFSPSKRLISSAIASQLTPP 56

Query: 540 QTNKLPKLDK------PSL-NPTLHEKFLNRLFEIDQESLEISK------NASKCSFKYT 400
           +++K PKL        PS+ NP+LH++FL++L E   +S + S       N +   +KYT
Sbjct: 57  KSSKRPKLSPHTHNPLPSIPNPSLHQRFLDKLLEPTDDSFQPSNQNPRTSNGADPKYKYT 116

Query: 399 PLEEQVVELKKKYPDVLLMIEVGYKYRFFGEDAENAARVLGIFAHMDHSFLTASVPTFRL 220
           PLE+QVV+LKK+YPDVLLM+EVGY+YRFFG+DA  AARVLGI+AH+DH+F+TAS+PTFRL
Sbjct: 117 PLEQQVVDLKKRYPDVLLMVEVGYRYRFFGQDAVIAARVLGIYAHLDHNFMTASIPTFRL 176

Query: 219 NVHVRRLVSEGYKVGVVKQTETAAIKAHGGNKLGPFSRGLSALYTKATLXXXXXXXXXXX 40
           NVHVRRLVS GYKVGVVKQTETAAIKAHG NKLGPF RGLSALYTKATL           
Sbjct: 177 NVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAQDLGGAEE 236

Query: 39  XXGQCNNYLVCVV 1
                +NYL C+V
Sbjct: 237 GCAGESNYLFCLV 249


>ref|XP_004168537.1| PREDICTED: DNA mismatch repair protein MSH3-like [Cucumis sativus]
          Length = 966

 Score =  267 bits (682), Expect = 2e-69
 Identities = 151/266 (56%), Positives = 183/266 (68%), Gaps = 30/266 (11%)
 Frame = -3

Query: 708 MGKQKQQIISRFFSXXXXXXXXXXXXTN------ATVTPP-------KISTTATFSPSKR 568
           MGKQKQQ+ISRFF+            ++      A +TPP       K+S T TFSPSKR
Sbjct: 1   MGKQKQQVISRFFAPKPKSPSLSSSSSSSSSATAADITPPTQPFSPAKVSATVTFSPSKR 60

Query: 567 LR----ATQLTSPQTNKLPKLDK------PSL-NPTLHEKFLNRLFEIDQESLEISK--- 430
           L     A+QLT P+++K PKL        PS+ NP+LH++FL+RL E   +S + S    
Sbjct: 61  LISSAIASQLTPPKSSKRPKLSPHTHNPLPSIPNPSLHQRFLDRLLEPTDDSFQPSNQNP 120

Query: 429 ---NASKCSFKYTPLEEQVVELKKKYPDVLLMIEVGYKYRFFGEDAENAARVLGIFAHMD 259
              N +   +KYTPLE+QVV+LKK+YPDVLLM+EVGY+YRFFG+DA  AARVLGI+AH+D
Sbjct: 121 RTSNGADPKYKYTPLEQQVVDLKKRYPDVLLMVEVGYRYRFFGQDAVIAARVLGIYAHLD 180

Query: 258 HSFLTASVPTFRLNVHVRRLVSEGYKVGVVKQTETAAIKAHGGNKLGPFSRGLSALYTKA 79
           H+F+TAS+PTFRLNVHVRRLVS GYKVGVVKQTETAAIKAHG NKLGPF RGLSALYTKA
Sbjct: 181 HNFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKA 240

Query: 78  TLXXXXXXXXXXXXXGQCNNYLVCVV 1
           TL                +NYL C+V
Sbjct: 241 TLEAAQDLGGAEEGCAGESNYLFCLV 266


>ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
          Length = 1137

 Score =  266 bits (679), Expect = 5e-69
 Identities = 150/252 (59%), Positives = 173/252 (68%), Gaps = 16/252 (6%)
 Frame = -3

Query: 708 MGKQKQQIISRFFSXXXXXXXXXXXXT--------------NATVTPPKISTTATFSPSK 571
           MGKQKQQ+ISRFF+                           N    PPKISTT TFSPSK
Sbjct: 1   MGKQKQQVISRFFAPKPKAPSSSSSSIPSSPSPSPSPSSLPNPPTPPPKISTTVTFSPSK 60

Query: 570 RLRATQLTSPQTN--KLPKLDKPSLNPTLHEKFLNRLFEIDQESLEISKNASKCSFKYTP 397
           RL ++ + SP T   K PK+  P ++P+LH+KF+ +L E    S          + KYTP
Sbjct: 61  RLPSSHV-SPSTKPPKAPKISHP-IDPSLHQKFVQKLLE---PSSSTPTKLPLPTTKYTP 115

Query: 396 LEEQVVELKKKYPDVLLMIEVGYKYRFFGEDAENAARVLGIFAHMDHSFLTASVPTFRLN 217
           LE+QVV+LK+KYPDVLLM+EVGY+YRFFGEDAE AARVLGI+AH+DH+FLTAS+PTFRLN
Sbjct: 116 LEQQVVDLKQKYPDVLLMVEVGYRYRFFGEDAEIAARVLGIYAHVDHNFLTASIPTFRLN 175

Query: 216 VHVRRLVSEGYKVGVVKQTETAAIKAHGGNKLGPFSRGLSALYTKATLXXXXXXXXXXXX 37
           VHVRRLVS G+KVGVVKQTETAAIKAHG NKLGPF RGLSALYTKATL            
Sbjct: 176 VHVRRLVSAGFKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAEEVGGGEEE 235

Query: 36  XGQCNNYLVCVV 1
            G  NNYLVCVV
Sbjct: 236 CGSYNNYLVCVV 247


>emb|CBI37346.3| unnamed protein product [Vitis vinifera]
          Length = 490

 Score =  266 bits (679), Expect = 5e-69
 Identities = 150/252 (59%), Positives = 173/252 (68%), Gaps = 16/252 (6%)
 Frame = -3

Query: 708 MGKQKQQIISRFFSXXXXXXXXXXXXT--------------NATVTPPKISTTATFSPSK 571
           MGKQKQQ+ISRFF+                           N    PPKISTT TFSPSK
Sbjct: 1   MGKQKQQVISRFFAPKSKAPSSSSSSIPSSPSPSPSPSSLPNPPTPPPKISTTVTFSPSK 60

Query: 570 RLRATQLTSPQTN--KLPKLDKPSLNPTLHEKFLNRLFEIDQESLEISKNASKCSFKYTP 397
           RL ++ + SP T   K PK+  P ++P+LH+KF+ +L    Q S          + KYTP
Sbjct: 61  RLPSSHV-SPSTKPPKAPKISHP-IDPSLHQKFVQKLL---QPSSSTPTKLPLPTTKYTP 115

Query: 396 LEEQVVELKKKYPDVLLMIEVGYKYRFFGEDAENAARVLGIFAHMDHSFLTASVPTFRLN 217
           LE+QVV+LK+KYPDVLLM+EVGY+YRFFGEDAE AARVLGI+AH+DH+FLTAS+PTFRLN
Sbjct: 116 LEQQVVDLKQKYPDVLLMVEVGYRYRFFGEDAEIAARVLGIYAHVDHNFLTASIPTFRLN 175

Query: 216 VHVRRLVSEGYKVGVVKQTETAAIKAHGGNKLGPFSRGLSALYTKATLXXXXXXXXXXXX 37
           VHVRRLVS G+KVGVVKQTETAAIKAHG NKLGPF RGLSALYTKATL            
Sbjct: 176 VHVRRLVSAGFKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAEDVGGGEEE 235

Query: 36  XGQCNNYLVCVV 1
            G  NNYLVCVV
Sbjct: 236 CGSYNNYLVCVV 247


>emb|CBI29513.3| unnamed protein product [Vitis vinifera]
          Length = 470

 Score =  265 bits (677), Expect = 9e-69
 Identities = 151/254 (59%), Positives = 172/254 (67%), Gaps = 18/254 (7%)
 Frame = -3

Query: 708 MGKQKQQIISRFF----------------SXXXXXXXXXXXXTNATVTPPKISTTATFSP 577
           MGKQKQQ+ISRFF                S             N    PPKISTT TFSP
Sbjct: 1   MGKQKQQVISRFFAPKSKAPSSSSFSIPSSPSPSPSPSPSSLPNPPTPPPKISTTVTFSP 60

Query: 576 SKRLRATQLTSPQTN--KLPKLDKPSLNPTLHEKFLNRLFEIDQESLEISKNASKCSFKY 403
           SKRL ++ + SP T   K PK+  P ++P+LH+KFL +L E    S          + KY
Sbjct: 61  SKRLPSSHV-SPSTKPPKAPKISHP-IDPSLHQKFLQKLLE---PSSSTPTKLPLPTTKY 115

Query: 402 TPLEEQVVELKKKYPDVLLMIEVGYKYRFFGEDAENAARVLGIFAHMDHSFLTASVPTFR 223
           TPLE+QVV+LK+KYPDVLLM+EVGY+YRFFGEDAE AARVL I+AH+DH+FLTAS+PTFR
Sbjct: 116 TPLEQQVVDLKQKYPDVLLMVEVGYRYRFFGEDAEIAARVLAIYAHVDHNFLTASIPTFR 175

Query: 222 LNVHVRRLVSEGYKVGVVKQTETAAIKAHGGNKLGPFSRGLSALYTKATLXXXXXXXXXX 43
           LNVHVRRLVS G+KVGVVKQTETAAIKAHG NKLGPF RGLSALYTKATL          
Sbjct: 176 LNVHVRRLVSAGFKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAEDVGGGE 235

Query: 42  XXXGQCNNYLVCVV 1
              G  NNYLVCVV
Sbjct: 236 EECGSYNNYLVCVV 249