BLASTX nr result

ID: Lithospermum22_contig00021039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00021039
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300588.1| actin related protein [Populus trichocarpa] ...    97   2e-18
ref|XP_003598309.1| Actin related protein [Medicago truncatula] ...    89   4e-16
ref|XP_002264128.1| PREDICTED: actin-related protein 8 [Vitis vi...    89   4e-16
emb|CAN62263.1| hypothetical protein VITISV_013986 [Vitis vinifera]    89   4e-16
ref|XP_004149570.1| PREDICTED: actin-related protein 8-like [Cuc...    87   2e-15

>ref|XP_002300588.1| actin related protein [Populus trichocarpa]
           gi|222847846|gb|EEE85393.1| actin related protein
           [Populus trichocarpa]
          Length = 473

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 50/112 (44%), Positives = 76/112 (67%), Gaps = 4/112 (3%)
 Frame = +2

Query: 107 MSTIIRKLWENISLNRSNSTSTGSNED---KIILTMTSASTGEFDKLPFDIFMQILMMIG 277
           M+ +++K+WE++S NR+ S S+ S +     +  T +S+S G FD+LP D+ +QI+ ++G
Sbjct: 1   MAMLLKKVWESVS-NRATSFSSSSIDSVTTPLSYTESSSSLGAFDRLPIDVVLQIVRLVG 59

Query: 278 PKESGRLCGVCKTWRFMIGGDNKLWIYFLQN-HQLDPPDFFAELRLRSGPPL 430
           PK++ RL  VCK+WR ++  DN+LWIYFLQN H      FF E  LRSG P+
Sbjct: 60  PKDAARLSVVCKSWRPLV-SDNRLWIYFLQNYHDTWDSVFFVETHLRSGYPI 110


>ref|XP_003598309.1| Actin related protein [Medicago truncatula]
           gi|355487357|gb|AES68560.1| Actin related protein
           [Medicago truncatula]
          Length = 471

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 49/111 (44%), Positives = 69/111 (62%), Gaps = 3/111 (2%)
 Frame = +2

Query: 107 MSTIIRKLWENISLNRSNSTSTGSNEDKIILTMTSASTGEFDKLPFDIFMQILMMIGPKE 286
           MS ++RKL E I   + N TS+   + + +L +     GE D+LP DI +QIL ++GPKE
Sbjct: 1   MSIVLRKLLEIIL--KRNPTSSDEQQQQQVLPLPYGDMGELDQLPSDILIQILRLLGPKE 58

Query: 287 SGRLCGVCKTWRFMIGGDNKLWIYFLQNHQLDP---PDFFAELRLRSGPPL 430
             +L  +CK+ +F +  DN+LW++FLQ HQ DP     FFAE  L SG PL
Sbjct: 59  VAKLSVICKSLKFSV-SDNRLWLHFLQTHQSDPSWDSVFFAETNLISGYPL 108


>ref|XP_002264128.1| PREDICTED: actin-related protein 8 [Vitis vinifera]
           gi|296090034|emb|CBI39853.3| unnamed protein product
           [Vitis vinifera]
          Length = 473

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 44/113 (38%), Positives = 73/113 (64%), Gaps = 4/113 (3%)
 Frame = +2

Query: 107 MSTIIRKLWENISLNRSNSTSTGSNEDKIILTMTSASTGEFDKLPFDIFMQILMMIGPKE 286
           M+ ++RK+WE++S  RS+  ++ S++ ++++    +STG F  +PFD+FM IL  + P+E
Sbjct: 1   MAALLRKVWESVS--RSSKATSESSDRRVVV---QSSTGAFSHIPFDVFMHILQFLEPRE 55

Query: 287 SGRLCGVCKTWRFMIGGDNKLWIYFLQNHQLDPPDF----FAELRLRSGPPLM 433
             +L  VCK W+F++  DN+LW+Y LQ  Q  P  +    FAE  L+ G PL+
Sbjct: 56  VAKLSLVCKYWKFLV-SDNQLWLYLLQKEQNQPGSWDSLVFAETHLQMGYPLL 107


>emb|CAN62263.1| hypothetical protein VITISV_013986 [Vitis vinifera]
          Length = 451

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 44/113 (38%), Positives = 73/113 (64%), Gaps = 4/113 (3%)
 Frame = +2

Query: 107 MSTIIRKLWENISLNRSNSTSTGSNEDKIILTMTSASTGEFDKLPFDIFMQILMMIGPKE 286
           M+ ++RK+WE++S  RS+  ++ S++ ++++    +STG F  +PFD+FM IL  + P+E
Sbjct: 1   MAALLRKVWESVS--RSSKATSESSDRRVVV---QSSTGAFSHIPFDVFMHILQFLEPRE 55

Query: 287 SGRLCGVCKTWRFMIGGDNKLWIYFLQNHQLDPPDF----FAELRLRSGPPLM 433
             +L  VCK W+F++  DN+LW+Y LQ  Q  P  +    FAE  L+ G PL+
Sbjct: 56  VAKLSLVCKYWKFLV-SDNQLWLYLLQKEQNQPGSWDSLVFAETHLQMGYPLL 107


>ref|XP_004149570.1| PREDICTED: actin-related protein 8-like [Cucumis sativus]
          Length = 466

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 49/114 (42%), Positives = 72/114 (63%), Gaps = 6/114 (5%)
 Frame = +2

Query: 107 MSTIIRKLWENIS----LNRSNSTSTGSNEDKIILTMTSASTGEFDKLPFDIFMQILMMI 274
           M+ ++RK+W ++S    L+  NS STG  E         +S G+FD++P +I MQIL + 
Sbjct: 1   MAMLLRKVWGSVSTRSRLHLENS-STGFEE---------SSLGDFDRIPVEILMQILQLA 50

Query: 275 GPKESGRLCGVCKTWRFMIGGDNKLWIYFLQNHQLDPPD--FFAELRLRSGPPL 430
           GPK + ++  +CK+WR ++  DN LWI+FLQN QL+P D   F E +L SG PL
Sbjct: 51  GPKTTAKMGMLCKSWRSLVSSDNTLWIFFLQN-QLEPWDSVLFGETKLASGYPL 103


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