BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00021038
         (1780 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containi...   631   e-178
ref|XP_002306741.1| predicted protein [Populus trichocarpa] gi|2...   604   e-170
ref|XP_002534070.1| pentatricopeptide repeat-containing protein,...   603   e-170
ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containi...   566   e-159
ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containi...   557   e-156

>ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
            chloroplastic [Vitis vinifera]
            gi|302143555|emb|CBI22116.3| unnamed protein product
            [Vitis vinifera]
          Length = 533

 Score =  631 bits (1627), Expect = e-178
 Identities = 308/510 (60%), Positives = 386/510 (75%)
 Frame = +2

Query: 74   TCFCSSTPPSTPISKFISNNPYLSMLENKCANMKDLKKIHAQLIKTGLIKDKIAASRVLS 253
            +C  +S  PST ISKFIS++P+LS+LE  C  MKDL+KIHA L+KTGL K  +A S VL+
Sbjct: 5    SCSLTSPSPSTSISKFISDHPHLSILEKHCTTMKDLQKIHAHLLKTGLAKHPLAVSPVLA 64

Query: 254  FCSVSSFSDLNYAYLVFTQIQKPTLFTWNTIIRGFSQSSTPQNAILLFIQMLSTSPIEPH 433
            FC+ S   D+NYAYLVFTQI  P LF+WNTIIRGFSQSSTP +AI LFI ML  S ++PH
Sbjct: 65   FCATSPGGDINYAYLVFTQIHSPNLFSWNTIIRGFSQSSTPHHAISLFIDMLIVSSVQPH 124

Query: 434  NLTYPSVFKAYTHLGLAKEGAQVHARVVKSGLESDIFIRNTLIHMYANCGFLEEAGKLFD 613
             LTYPSVFKAY  LGLA  GAQ+H RV+K GL+ D FIRNT+I+MYANCGFL E  K F 
Sbjct: 125  RLTYPSVFKAYAQLGLAHYGAQLHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAFY 184

Query: 614  EDEMLEDVVSWNSMIMGYAKSGQIDDSWRLFNKMAIKNHVSWNSMISGSVRNGKWIEALE 793
            E  M  D+V+WNSMIMG AK G++D+S +LF++M ++N VSWNSMISG VRNG+  EAL+
Sbjct: 185  E-RMDFDIVAWNSMIMGLAKCGEVDESRKLFDEMPLRNTVSWNSMISGYVRNGRLREALD 243

Query: 794  LFKKMQEDNINPSAFTLVSLLNACRNLGAIEQGKWIHEYXXXXXXXXXXXXSTGIIDMYC 973
            LF +MQE+ I PS FT+VSLLNA   LGA++QG+WIH+Y            +  IIDMYC
Sbjct: 244  LFGQMQEERIKPSEFTMVSLLNASARLGALKQGEWIHDYIRKNNFELNVIVTASIIDMYC 303

Query: 974  KCGEVDMAFHVFETTTEKGLSCWNSMMFGLATNGYEDSAIELFSRLESSNLKPDEVSFVC 1153
            KCG +  AF VFE    KGLS WN+M+ GLA NG E+ AI+LFSRLE SNL+PD+V+FV 
Sbjct: 304  KCGSIGEAFQVFEMAPLKGLSSWNTMILGLAMNGCENEAIQLFSRLECSNLRPDDVTFVG 363

Query: 1154 VLTACNHKGFVSEAKNYFKKMEDVYGIEPSIKHYGCLVDILGRTGFTQEAKEVVKNMPMK 1333
            VLTACN+ G V +AK YF  M   Y IEPSIKHY C+VD LGR G  +EA+E+++NMP+ 
Sbjct: 364  VLTACNYSGLVDKAKEYFSLMSKTYKIEPSIKHYSCMVDTLGRAGLLEEAEELIRNMPVN 423

Query: 1334 PDVIIWSCLLSASKNHGDFETAKWAAKHLIEMDSKETSGYVLMSNIYAALGGFEEAIQER 1513
            PD IIWS LLSA + HG+ E AK AAKH++++D  ++ GYVL+SNIYAA   FEEA+++R
Sbjct: 424  PDAIIWSSLLSACRKHGNVELAKRAAKHIVDLDGNDSCGYVLLSNIYAASDQFEEAMEQR 483

Query: 1514 NLLKERDVKKQPGGSLIEVNGEVHEFLSSG 1603
              +KE+ ++K+PG SLIEVNGE+HEF++ G
Sbjct: 484  LSMKEKQIEKEPGCSLIEVNGEIHEFVAGG 513


>ref|XP_002306741.1| predicted protein [Populus trichocarpa] gi|222856190|gb|EEE93737.1|
            predicted protein [Populus trichocarpa]
          Length = 509

 Score =  604 bits (1557), Expect = e-170
 Identities = 298/487 (61%), Positives = 371/487 (76%), Gaps = 1/487 (0%)
 Frame = +2

Query: 146  MLENKCANMKDLKKIHAQLIKTGLIKDKIAASRVLSFCSVSSFSDLNYAYLVFTQIQKPT 325
            ML+  C +MKDL+KIHAQLIKTGL KD IAASRVL+FC+ S   D+NYAYLVFTQI+ P 
Sbjct: 1    MLDKNCTSMKDLQKIHAQLIKTGLAKDTIAASRVLAFCT-SPAGDINYAYLVFTQIRNPN 59

Query: 326  LFTWNTIIRGFSQSSTPQNAILLFIQMLSTSPI-EPHNLTYPSVFKAYTHLGLAKEGAQV 502
            LF WNTIIRGFSQSSTP NAI LFI M+ TSP  +P  LTYPSVFKAY  LGLA EGAQ+
Sbjct: 60   LFVWNTIIRGFSQSSTPHNAISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLGLAHEGAQL 119

Query: 503  HARVVKSGLESDIFIRNTLIHMYANCGFLEEAGKLFDEDEMLEDVVSWNSMIMGYAKSGQ 682
            H RV+K GLE+D FI+NT+++MY NCGFL EA ++FD      DVV+WN+MI+G AK G+
Sbjct: 120  HGRVIKLGLENDQFIQNTILNMYVNCGFLGEAQRIFDGATGF-DVVTWNTMIIGLAKCGE 178

Query: 683  IDDSWRLFNKMAIKNHVSWNSMISGSVRNGKWIEALELFKKMQEDNINPSAFTLVSLLNA 862
            ID S RLF+KM ++N VSWNSMISG VR G++ EA+ELF +MQE+ I PS FT+VSLLNA
Sbjct: 179  IDKSRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEFTMVSLLNA 238

Query: 863  CRNLGAIEQGKWIHEYXXXXXXXXXXXXSTGIIDMYCKCGEVDMAFHVFETTTEKGLSCW 1042
            C  LGA+ QG+WIH+Y             T IIDMY KCG +D A  VF++  +KGLSCW
Sbjct: 239  CACLGALRQGEWIHDYIVKNNFALNSIVITAIIDMYSKCGSIDKALQVFKSAPKKGLSCW 298

Query: 1043 NSMMFGLATNGYEDSAIELFSRLESSNLKPDEVSFVCVLTACNHKGFVSEAKNYFKKMED 1222
            NS++ GLA +G  + A+ LFS+LESSNLKPD VSF+ VLTACNH G V  AK+YF  M +
Sbjct: 299  NSLILGLAMSGRGNEAVRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDRAKDYFLLMSE 358

Query: 1223 VYGIEPSIKHYGCLVDILGRTGFTQEAKEVVKNMPMKPDVIIWSCLLSASKNHGDFETAK 1402
             Y IEPSIKHY C+VD+LGR G  +EA+E++K+MP+ PD IIW  LLS+ + +G+ E AK
Sbjct: 359  TYKIEPSIKHYSCMVDVLGRAGLLEEAEELIKSMPVNPDAIIWGSLLSSCREYGNIEMAK 418

Query: 1403 WAAKHLIEMDSKETSGYVLMSNIYAALGGFEEAIQERNLLKERDVKKQPGGSLIEVNGEV 1582
             AAK + E+D  E+S ++L+SN+YAA   FEEAI++R  LKE+ + K+PG SLIEVNGEV
Sbjct: 419  QAAKRVNELDPNESSSFILLSNVYAAHNHFEEAIEQRLSLKEKQMDKEPGCSLIEVNGEV 478

Query: 1583 HEFLSSG 1603
            HEF++ G
Sbjct: 479  HEFVAGG 485


>ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223525897|gb|EEF28314.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 533

 Score =  603 bits (1555), Expect = e-170
 Identities = 296/509 (58%), Positives = 378/509 (74%), Gaps = 1/509 (0%)
 Frame = +2

Query: 80   FCSSTPPS-TPISKFISNNPYLSMLENKCANMKDLKKIHAQLIKTGLIKDKIAASRVLSF 256
            FC   PPS   ISK IS+  YLSML+  C  MKDLKKIH+QLIKTGL KD  AASR+L+F
Sbjct: 4    FCCLLPPSPATISKLISDQTYLSMLDKNCTTMKDLKKIHSQLIKTGLAKDTNAASRILAF 63

Query: 257  CSVSSFSDLNYAYLVFTQIQKPTLFTWNTIIRGFSQSSTPQNAILLFIQMLSTSPIEPHN 436
            C+ S   D+NYAYLVF QIQ P +F WNTIIRGFS+SS PQN+I L+I ML TSP++P  
Sbjct: 64   CA-SPAGDINYAYLVFVQIQNPNIFAWNTIIRGFSRSSVPQNSISLYIDMLLTSPVQPQR 122

Query: 437  LTYPSVFKAYTHLGLAKEGAQVHARVVKSGLESDIFIRNTLIHMYANCGFLEEAGKLFDE 616
            LTYPSVFKA+  L LA EGAQ+H +++K GLE+D FIRNT++ MY NCGF  EA K+FD 
Sbjct: 123  LTYPSVFKAFAQLDLASEGAQLHGKMIKLGLENDSFIRNTILFMYVNCGFTSEARKVFDR 182

Query: 617  DEMLEDVVSWNSMIMGYAKSGQIDDSWRLFNKMAIKNHVSWNSMISGSVRNGKWIEALEL 796
              M  D+V+WN+MIMG AK G +D+S RLF+KM+++N VSWNSMISG VRNG++ +ALEL
Sbjct: 183  G-MDFDIVAWNTMIMGVAKCGLVDESRRLFDKMSLRNAVSWNSMISGYVRNGRFFDALEL 241

Query: 797  FKKMQEDNINPSAFTLVSLLNACRNLGAIEQGKWIHEYXXXXXXXXXXXXSTGIIDMYCK 976
            F+KMQ + I PS FT+VSLLNAC  LGAI QG+WIH+Y             T IIDMY K
Sbjct: 242  FQKMQVERIEPSEFTMVSLLNACACLGAIRQGEWIHDYMVKKKFELNPIVVTAIIDMYSK 301

Query: 977  CGEVDMAFHVFETTTEKGLSCWNSMMFGLATNGYEDSAIELFSRLESSNLKPDEVSFVCV 1156
            CG +D A  VF++   +GLSCWNSM+ GLA NG E+ A++LFS L+SS+L+PD+VSF+ V
Sbjct: 302  CGSIDKAVQVFQSAPRRGLSCWNSMILGLAMNGQENEALQLFSVLQSSDLRPDDVSFIAV 361

Query: 1157 LTACNHKGFVSEAKNYFKKMEDVYGIEPSIKHYGCLVDILGRTGFTQEAKEVVKNMPMKP 1336
            LTAC+H G V +AK+YF  M D Y I+P IKH+ C+VD+LGR G  +EA+E++++M + P
Sbjct: 362  LTACDHTGMVDKAKDYFLLMRDKYKIKPGIKHFSCMVDVLGRAGLLEEAEELIRSMHVDP 421

Query: 1337 DVIIWSCLLSASKNHGDFETAKWAAKHLIEMDSKETSGYVLMSNIYAALGGFEEAIQERN 1516
            D IIW  LL +   +G+ + AK AA HLIE++  E+S +VL++N YAA   FEEA++ER 
Sbjct: 422  DAIIWGSLLWSCCKYGNIKMAKRAANHLIELNPSESSSFVLVANAYAAANNFEEALKERL 481

Query: 1517 LLKERDVKKQPGGSLIEVNGEVHEFLSSG 1603
             LKE  + K+PG S IEV GEVHEF++ G
Sbjct: 482  TLKENHIGKEPGCSCIEVGGEVHEFVAGG 510


>ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
            chloroplastic-like [Glycine max]
          Length = 534

 Score =  566 bits (1459), Expect = e-159
 Identities = 286/511 (55%), Positives = 374/511 (73%), Gaps = 4/511 (0%)
 Frame = +2

Query: 83   CSSTPPSTP----ISKFISNNPYLSMLENKCANMKDLKKIHAQLIKTGLIKDKIAASRVL 250
            CS+ PPS+     I+KFIS+ P L+ML+ +C NMKDL+KIHA +IKTGL    +AASRVL
Sbjct: 5    CSALPPSSSSSPSIAKFISDQPCLTMLQTQCTNMKDLQKIHAHIIKTGLAHHTVAASRVL 64

Query: 251  SFCSVSSFSDLNYAYLVFTQIQKPTLFTWNTIIRGFSQSSTPQNAILLFIQMLSTSPIEP 430
            +FC+ SS  D+NYAYL+FT I  P L+ WNTIIRGFS+SSTP  AI LF+ ML +S + P
Sbjct: 65   TFCASSS-GDINYAYLLFTTIPSPNLYCWNTIIRGFSRSSTPHLAISLFVDMLCSSVL-P 122

Query: 431  HNLTYPSVFKAYTHLGLAKEGAQVHARVVKSGLESDIFIRNTLIHMYANCGFLEEAGKLF 610
              LTYPSVFKAY  LG   +GAQ+H RVVK GLE D FI+NT+I+MYAN G L EA ++F
Sbjct: 123  QRLTYPSVFKAYAQLGAGYDGAQLHGRVVKLGLEKDQFIQNTIIYMYANSGLLSEARRVF 182

Query: 611  DEDEMLEDVVSWNSMIMGYAKSGQIDDSWRLFNKMAIKNHVSWNSMISGSVRNGKWIEAL 790
            DE   L DVV+ NSMIMG AK G++D S RLF+ M  +  V+WNSMISG VRN + +EAL
Sbjct: 183  DELVDL-DVVACNSMIMGLAKCGEVDKSRRLFDNMPTRTRVTWNSMISGYVRNKRLMEAL 241

Query: 791  ELFKKMQEDNINPSAFTLVSLLNACRNLGAIEQGKWIHEYXXXXXXXXXXXXSTGIIDMY 970
            ELF+KMQ + + PS FT+VSLL+AC +LGA++ G+W+H+Y             T IIDMY
Sbjct: 242  ELFRKMQGERVEPSEFTMVSLLSACAHLGALKHGEWVHDYVKRGHFELNVIVLTAIIDMY 301

Query: 971  CKCGEVDMAFHVFETTTEKGLSCWNSMMFGLATNGYEDSAIELFSRLESSNLKPDEVSFV 1150
            CKCG +  A  VFE +  +GLSCWNS++ GLA NGYE  AIE FS+LE+S+LKPD VSF+
Sbjct: 302  CKCGVIVKAIEVFEASPTRGLSCWNSIIIGLALNGYERKAIEYFSKLEASDLKPDHVSFI 361

Query: 1151 CVLTACNHKGFVSEAKNYFKKMEDVYGIEPSIKHYGCLVDILGRTGFTQEAKEVVKNMPM 1330
             VLTAC + G V +A++YF  M + Y IEPSIKHY C+V++LG+    +EA++++K MP+
Sbjct: 362  GVLTACKYIGAVGKARDYFSLMMNKYEIEPSIKHYTCMVEVLGQAALLEEAEQLIKGMPL 421

Query: 1331 KPDVIIWSCLLSASKNHGDFETAKWAAKHLIEMDSKETSGYVLMSNIYAALGGFEEAIQE 1510
            K D IIW  LLS+ + HG+ E AK AA+ + E++  + SGY+LMSN+ AA   FEEA+++
Sbjct: 422  KADFIIWGSLLSSCRKHGNVEIAKRAAQRVCELNPSDASGYLLMSNVQAASNQFEEAMEQ 481

Query: 1511 RNLLKERDVKKQPGGSLIEVNGEVHEFLSSG 1603
            R L++ER  +K+PG S IE+ GEVHEFL+ G
Sbjct: 482  RILMRERLAEKEPGCSSIELYGEVHEFLAGG 512


>ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
            chloroplastic-like [Cucumis sativus]
            gi|449530724|ref|XP_004172343.1| PREDICTED:
            pentatricopeptide repeat-containing protein At2g42920,
            chloroplastic-like [Cucumis sativus]
          Length = 543

 Score =  557 bits (1436), Expect = e-156
 Identities = 277/509 (54%), Positives = 364/509 (71%)
 Frame = +2

Query: 77   CFCSSTPPSTPISKFISNNPYLSMLENKCANMKDLKKIHAQLIKTGLIKDKIAASRVLSF 256
            C   S  P +     ISN PYLSM++  C  M+DL++ HA LIK+G   +  AASR+L+F
Sbjct: 6    CGLPSLSPISTSKLIISNQPYLSMVDKYCTTMRDLQQFHAHLIKSGQAIESFAASRILAF 65

Query: 257  CSVSSFSDLNYAYLVFTQIQKPTLFTWNTIIRGFSQSSTPQNAILLFIQMLSTSPIEPHN 436
            C+ S   +++YAYLVF Q+Q P LF+WNT+IRGFSQSS PQ A+ LFI ML +S +EP  
Sbjct: 66   CA-SPLGNMDYAYLVFLQMQNPNLFSWNTVIRGFSQSSNPQIALYLFIDMLVSSQVEPQR 124

Query: 437  LTYPSVFKAYTHLGLAKEGAQVHARVVKSGLESDIFIRNTLIHMYANCGFLEEAGKLFDE 616
            LTYPS+FKAY+ LGLA +GAQ+H R++K GL+ D FIRNT+++MYA  GFL EA ++F++
Sbjct: 125  LTYPSIFKAYSQLGLAHDGAQLHGRIIKLGLQFDPFIRNTILYMYATGGFLSEARRIFNQ 184

Query: 617  DEMLEDVVSWNSMIMGYAKSGQIDDSWRLFNKMAIKNHVSWNSMISGSVRNGKWIEALEL 796
             EM  DVVSWNSMI+G AK G+ID+S +LF+KM +KN +SWNSMI G VRNG + EAL+L
Sbjct: 185  -EMEFDVVSWNSMILGLAKCGEIDESRKLFDKMPVKNPISWNSMIGGYVRNGMFKEALKL 243

Query: 797  FKKMQEDNINPSAFTLVSLLNACRNLGAIEQGKWIHEYXXXXXXXXXXXXSTGIIDMYCK 976
            F KMQE+ I PS FT+VSLLNA   +GA+ QG WIHEY             T IIDMYCK
Sbjct: 244  FIKMQEERIQPSEFTMVSLLNASAQIGALRQGVWIHEYIKKNNLQLNAIVVTAIIDMYCK 303

Query: 977  CGEVDMAFHVFETTTEKGLSCWNSMMFGLATNGYEDSAIELFSRLESSNLKPDEVSFVCV 1156
            CG +  A  VFE    + LS WNSM+FGLA NG E  AI +F  LESS+LKPD +SF+ V
Sbjct: 304  CGSIGNALQVFEKIPCRSLSSWNSMIFGLAVNGCEKEAILVFKMLESSSLKPDCISFMAV 363

Query: 1157 LTACNHKGFVSEAKNYFKKMEDVYGIEPSIKHYGCLVDILGRTGFTQEAKEVVKNMPMKP 1336
            LTACNH   V E   +F +M++ Y IEPSIKHY  +VD++ R GF +EA++ +K MP++ 
Sbjct: 364  LTACNHGAMVDEGMEFFSRMKNTYRIEPSIKHYNLMVDMISRAGFLEEAEQFIKTMPIEK 423

Query: 1337 DVIIWSCLLSASKNHGDFETAKWAAKHLIEMDSKETSGYVLMSNIYAALGGFEEAIQERN 1516
            D IIW CLLSA + +G+ E AK AA+ + E+D +ET GYVLM+NI+A    F  A+++R 
Sbjct: 424  DAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEETMGYVLMANIHAWGNNFVGAMEKRV 483

Query: 1517 LLKERDVKKQPGGSLIEVNGEVHEFLSSG 1603
             ++ + V+K+PGGS IEV+ EVHEF++ G
Sbjct: 484  AMRMKKVEKEPGGSFIEVDEEVHEFIAGG 512