BLASTX nr result
ID: Lithospermum22_contig00021015
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00021015
(1796 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, puta... 962 0.0
ref|XP_003589372.1| DNA-directed RNA polymerase [Medicago trunca... 959 0.0
gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode... 959 0.0
ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II su... 956 0.0
ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 ... 955 0.0
>ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
gi|223541723|gb|EEF43271.1| DNA-directed RNA polymerase
II subunit, putative [Ricinus communis]
Length = 1194
Score = 962 bits (2487), Expect = 0.0
Identities = 479/533 (89%), Positives = 500/533 (93%)
Frame = +2
Query: 197 ITQEDAWAVISAFFEEKGLVRQQLDSFDEFIQNTMQEIVDECADIQIRPEFQHNPGLQPD 376
ITQEDAWAVISA+FEEKGLVRQQLDSFDEFIQNTMQEIVDE ADI+IRPE QHNPG Q D
Sbjct: 23 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 82
Query: 377 FAETIHKIGFGQIYLSKPMMTESDGETATLFPKAARLRNMTYSAPLYVDVSHSVIKRGHD 556
FAETI+KI FGQIYLSKPMMTESDGETATLFPKAARLRN+TYSAPLYVDV+ VIK+GHD
Sbjct: 83 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 142
Query: 557 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 736
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 143 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202
Query: 737 IAQEKMSTNHVYVFKRRQPNKYAYVAEVRSMAENQNRPPSPMFVRMLSRSSAKGGSSGQC 916
IAQEKMSTNHVYVFK+RQPNKYAYVAEVRSMAE+QNRPPS MFVRMLSR+SAKGGSSGQ
Sbjct: 203 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 262
Query: 917 IKATLPYIRTEIPIITVFRAMGIVADKHILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 1096
I+ATLPYIRTEIPII VFRA+G VADK ILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 263 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 322
Query: 1097 VALDYIGKRGAPAGVSKEKRIKYAMDILQKDFLPHVGVGDFCLTKKAYYFGYIIYXXXXX 1276
VALDYIGKRGA GV+KEKRIKYA +ILQK+ LPHVGVG++C TKKAYYFGYII+
Sbjct: 323 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 382
Query: 1277 XXXXXXXDDRDHYGNKRLDLAGPLLGQLFRMLFRKLTSDVRSYVKKCVDKGKDVNLQFAI 1456
DDRDHYGNKRLDLAGPLLG LFRMLFRKLT DVRSYV+KCVD GKDVNLQFAI
Sbjct: 383 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 442
Query: 1457 NAKTITSGLKYSLSSGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1636
AKTITSGLKYSL++GNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 443 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502
Query: 1637 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWG 1795
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWG
Sbjct: 503 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWG 555
>ref|XP_003589372.1| DNA-directed RNA polymerase [Medicago truncatula]
gi|355478420|gb|AES59623.1| DNA-directed RNA polymerase
[Medicago truncatula]
Length = 1213
Score = 959 bits (2480), Expect = 0.0
Identities = 478/533 (89%), Positives = 497/533 (93%)
Frame = +2
Query: 197 ITQEDAWAVISAFFEEKGLVRQQLDSFDEFIQNTMQEIVDECADIQIRPEFQHNPGLQPD 376
ITQEDAWAVISA+FEEKGLVRQQLDSFDEFIQNTMQEIVDE ADI+IRPE QHNPG Q D
Sbjct: 24 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 83
Query: 377 FAETIHKIGFGQIYLSKPMMTESDGETATLFPKAARLRNMTYSAPLYVDVSHSVIKRGHD 556
FAETI+KI FGQIYLSKPMMTESDGETATLFPKAARLRN+TYSAPLYVDVS VIK+GHD
Sbjct: 84 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHD 143
Query: 557 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 736
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 144 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 203
Query: 737 IAQEKMSTNHVYVFKRRQPNKYAYVAEVRSMAENQNRPPSPMFVRMLSRSSAKGGSSGQC 916
IAQEKMSTNHVYVFK+RQPNKYAYV EVRSMAE+QNRPPS MFVRMLSR+SAKGGSSGQ
Sbjct: 204 IAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSTMFVRMLSRASAKGGSSGQY 263
Query: 917 IKATLPYIRTEIPIITVFRAMGIVADKHILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 1096
I+ATLPYIRTEIPII VFRA+G VADK ILEHICYDF DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 264 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 323
Query: 1097 VALDYIGKRGAPAGVSKEKRIKYAMDILQKDFLPHVGVGDFCLTKKAYYFGYIIYXXXXX 1276
VALDYIGKRG+ GV+KEKRIKYA DILQK+ LPHVGVG++C TKKAYYFGYII+
Sbjct: 324 VALDYIGKRGSTVGVTKEKRIKYAKDILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 383
Query: 1277 XXXXXXXDDRDHYGNKRLDLAGPLLGQLFRMLFRKLTSDVRSYVKKCVDKGKDVNLQFAI 1456
DDRDHYGNKRLDLAGPLLG LFRMLFRKLT DVR YV+KCVD GKDVNLQFAI
Sbjct: 384 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 443
Query: 1457 NAKTITSGLKYSLSSGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1636
AKTITSGLKYSL++GNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 444 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 503
Query: 1637 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWG 1795
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWG
Sbjct: 504 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWG 556
>gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron macrophyllum]
Length = 1191
Score = 959 bits (2480), Expect = 0.0
Identities = 478/533 (89%), Positives = 498/533 (93%)
Frame = +2
Query: 197 ITQEDAWAVISAFFEEKGLVRQQLDSFDEFIQNTMQEIVDECADIQIRPEFQHNPGLQPD 376
ITQEDAWAVISA+FEEKGLVRQQLDSFDEFIQNTMQEIVDE ADI+IRPE QHNPG Q D
Sbjct: 20 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79
Query: 377 FAETIHKIGFGQIYLSKPMMTESDGETATLFPKAARLRNMTYSAPLYVDVSHSVIKRGHD 556
FAETI+KI FGQIYLSKPMMTESDGETATLFPKAARLRN+TYSAPLYVDV+ VIK+GHD
Sbjct: 80 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139
Query: 557 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 736
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 140 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 199
Query: 737 IAQEKMSTNHVYVFKRRQPNKYAYVAEVRSMAENQNRPPSPMFVRMLSRSSAKGGSSGQC 916
IAQEKMSTNHVYVFK+RQPNKYAYVAEVRSMAE+QNRPPS MFVRMLSR+SAKGGSSGQ
Sbjct: 200 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 259
Query: 917 IKATLPYIRTEIPIITVFRAMGIVADKHILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 1096
I+ATLPYIRTEIPII VFRA+G VADK ILEHICYDF DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 260 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 319
Query: 1097 VALDYIGKRGAPAGVSKEKRIKYAMDILQKDFLPHVGVGDFCLTKKAYYFGYIIYXXXXX 1276
VALDYIGKRGA GV+KEKRIKYA +ILQK+ LPHVGVG++C TKKAYYFGYII+
Sbjct: 320 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 379
Query: 1277 XXXXXXXDDRDHYGNKRLDLAGPLLGQLFRMLFRKLTSDVRSYVKKCVDKGKDVNLQFAI 1456
DDRDHYGNKRLDLAGPLLG LFRMLFRKLT DVR YV+KCVD GKDVNLQFAI
Sbjct: 380 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 439
Query: 1457 NAKTITSGLKYSLSSGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1636
AKTITSGLKYSL++GNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 440 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499
Query: 1637 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWG 1795
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWG
Sbjct: 500 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWG 552
>ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cucumis
sativus] gi|449479313|ref|XP_004155566.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB2-like [Cucumis
sativus]
Length = 1199
Score = 956 bits (2470), Expect = 0.0
Identities = 476/533 (89%), Positives = 497/533 (93%)
Frame = +2
Query: 197 ITQEDAWAVISAFFEEKGLVRQQLDSFDEFIQNTMQEIVDECADIQIRPEFQHNPGLQPD 376
ITQEDAWAVISA+FEEKGLVRQQLDSFDEFIQNTMQEIVDE ADI+IRPE QHNPG Q D
Sbjct: 28 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 87
Query: 377 FAETIHKIGFGQIYLSKPMMTESDGETATLFPKAARLRNMTYSAPLYVDVSHSVIKRGHD 556
AETI+KI FGQIYLSKPMMTESDGETATLFPKAARLRN+TYSAPLYVDVS VIK+GHD
Sbjct: 88 VAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHD 147
Query: 557 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 736
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 148 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 207
Query: 737 IAQEKMSTNHVYVFKRRQPNKYAYVAEVRSMAENQNRPPSPMFVRMLSRSSAKGGSSGQC 916
IAQEKMSTNHVYVFK+RQPNKYA+VAEVRSMAE+QNRPPS MFVRMLSR+SAKGGSSGQ
Sbjct: 208 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 267
Query: 917 IKATLPYIRTEIPIITVFRAMGIVADKHILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 1096
I+ATLPYIR EIPII VFRA+G VADK ILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 268 IRATLPYIRNEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 327
Query: 1097 VALDYIGKRGAPAGVSKEKRIKYAMDILQKDFLPHVGVGDFCLTKKAYYFGYIIYXXXXX 1276
VALDYIGKRG+ GV+KEKRIKYA +ILQK+ LPHVGVG+FC TKKAYYFGYII+
Sbjct: 328 VALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLC 387
Query: 1277 XXXXXXXDDRDHYGNKRLDLAGPLLGQLFRMLFRKLTSDVRSYVKKCVDKGKDVNLQFAI 1456
DDRDHYGNKRLDLAGPLLG LFRMLFRKLT DVR YV+KCVD GKDVNLQFAI
Sbjct: 388 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 447
Query: 1457 NAKTITSGLKYSLSSGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1636
AKTITSGLKYSL++GNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 448 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 507
Query: 1637 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWG 1795
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWG
Sbjct: 508 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWG 560
>ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 [Solanum lycopersicum]
gi|11134656|sp|Q42877.1|RPB2_SOLLC RecName:
Full=DNA-directed RNA polymerase II subunit RPB2;
Short=RNA polymerase II subunit 2; Short=RNA polymerase
II subunit B2; AltName: Full=DNA-directed RNA polymerase
II 135 kDa polypeptide gi|1049068|gb|AAC49273.1| RNA
polymerase II subunit 2 [Solanum lycopersicum]
Length = 1191
Score = 955 bits (2469), Expect = 0.0
Identities = 475/533 (89%), Positives = 497/533 (93%)
Frame = +2
Query: 197 ITQEDAWAVISAFFEEKGLVRQQLDSFDEFIQNTMQEIVDECADIQIRPEFQHNPGLQPD 376
ITQEDAWAVISA+FEEKGLVRQQLDSFDEFIQNTMQEIVDE ADI+IRPE QHNPG Q D
Sbjct: 20 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79
Query: 377 FAETIHKIGFGQIYLSKPMMTESDGETATLFPKAARLRNMTYSAPLYVDVSHSVIKRGHD 556
FAETI+KI FGQIYLSKPMMTESDGETATLFPKAARLRN+TYSAPLYVDV+ VIK+GHD
Sbjct: 80 FAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139
Query: 557 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 736
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP DQGGYFIINGSEKVL
Sbjct: 140 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPLDQGGYFIINGSEKVL 199
Query: 737 IAQEKMSTNHVYVFKRRQPNKYAYVAEVRSMAENQNRPPSPMFVRMLSRSSAKGGSSGQC 916
IAQEKMSTNHVYVFK+RQPNKYA+VAEVRSMA+ QNRPPS MFVRMLSR+SAKGGSSGQ
Sbjct: 200 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMADTQNRPPSTMFVRMLSRTSAKGGSSGQY 259
Query: 917 IKATLPYIRTEIPIITVFRAMGIVADKHILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 1096
I+ATLPYIRTEIPII VFRA+G VADK ILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ
Sbjct: 260 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 319
Query: 1097 VALDYIGKRGAPAGVSKEKRIKYAMDILQKDFLPHVGVGDFCLTKKAYYFGYIIYXXXXX 1276
VALDYIGKRGA GV++EKRIKYA +ILQK+ LPHVGVG++C TKKAYYFGYII+
Sbjct: 320 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 379
Query: 1277 XXXXXXXDDRDHYGNKRLDLAGPLLGQLFRMLFRKLTSDVRSYVKKCVDKGKDVNLQFAI 1456
DDRDHYGNKRLDLAGPLLG LFRMLFRKLT DVR YV+KCVD GKDVNLQFAI
Sbjct: 380 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 439
Query: 1457 NAKTITSGLKYSLSSGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1636
AKTITSGLKYSL++GNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 440 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499
Query: 1637 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWG 1795
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWG
Sbjct: 500 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWG 552