BLASTX nr result

ID: Lithospermum22_contig00020962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00020962
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606712.1| Pumilio-like protein [Medicago truncatula] g...    55   6e-06
ref|XP_002524201.1| pumilio, putative [Ricinus communis] gi|2235...    55   8e-06

>ref|XP_003606712.1| Pumilio-like protein [Medicago truncatula]
           gi|355507767|gb|AES88909.1| Pumilio-like protein
           [Medicago truncatula]
          Length = 1025

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/39 (64%), Positives = 28/39 (71%)
 Frame = +1

Query: 40  ISEEEIRSDPAXXXXXXXXXXMNPRLPPPLLSKEDWRRQ 156
           +SEEE+RSDPA          +NPRLPPPLLSKEDWR Q
Sbjct: 90  VSEEELRSDPAYLQYYYSNVNLNPRLPPPLLSKEDWRFQ 128


>ref|XP_002524201.1| pumilio, putative [Ricinus communis] gi|223536478|gb|EEF38125.1|
           pumilio, putative [Ricinus communis]
          Length = 999

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/37 (67%), Positives = 27/37 (72%)
 Frame = +1

Query: 40  ISEEEIRSDPAXXXXXXXXXXMNPRLPPPLLSKEDWR 150
           +SEEEIRSDPA          +NPRLPPPLLSKEDWR
Sbjct: 86  LSEEEIRSDPAYVNYYYSNVNLNPRLPPPLLSKEDWR 122


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