BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00020939
         (1474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16435.3| unnamed protein product [Vitis vinifera]              629   e-178
ref|XP_003597480.1| DNA topoisomerase 6 subunit B [Medicago trun...   614   e-173
ref|NP_188714.2| DNA topoisomerase 6 subunit B [Arabidopsis thal...   606   e-171
ref|XP_003543555.1| PREDICTED: DNA topoisomerase 6 subunit B-lik...   603   e-170
ref|XP_004142138.1| PREDICTED: DNA topoisomerase 6 subunit B-lik...   598   e-169

>emb|CBI16435.3| unnamed protein product [Vitis vinifera]
          Length = 673

 Score =  629 bits (1622), Expect = e-178
 Identities = 309/383 (80%), Positives = 349/383 (91%)
 Frame = +2

Query: 2    QFLFRFIAEAQDKNVTVKFARRTDVMPPIPLETKYHPSAVDLLLIKRLIAETSTQNLLQF 181
            QFLF+F+++  DKNVT++FARRTD+MPP+P ETKYHPSAVDLLLIKRLI+ETS +NLLQF
Sbjct: 290  QFLFKFVSDTSDKNVTIRFARRTDIMPPVPAETKYHPSAVDLLLIKRLISETSKENLLQF 349

Query: 182  LQREFVNVNKPLAERLIGEMGPDFSAKMSVKSLSSEQIVRIHQLFRQAKFDDPSGDCLSP 361
            LQ EFVN+ K  AERLIGEMGPDFS KM+VKSL+S+QIVRIHQLFRQAKFDDPSGDCLSP
Sbjct: 350  LQHEFVNIGKSYAERLIGEMGPDFSPKMAVKSLTSQQIVRIHQLFRQAKFDDPSGDCLSP 409

Query: 362  AGEYNLRLGIIKELHPDMVATYSGSPQVFEGHPFLVEAGVSIGGKDVKHGLNIFRFANRI 541
            AGEYNLRLGIIKELHPDMVATYSGS QVFEGHPF+VEAGVSIGGKDVK GLNIFRFANRI
Sbjct: 410  AGEYNLRLGIIKELHPDMVATYSGSAQVFEGHPFMVEAGVSIGGKDVKQGLNIFRFANRI 469

Query: 542  PLLFEQGADVVTRTALRRINWNSYKINQTQDKIGVFVSIVSTKIPFKGTGKEYIGDDISE 721
            PLLFEQGADVVTRTAL+RINWNSYKINQ QDKIGVFVSIVSTKIPFKGTGKEYIGDDISE
Sbjct: 470  PLLFEQGADVVTRTALKRINWNSYKINQAQDKIGVFVSIVSTKIPFKGTGKEYIGDDISE 529

Query: 722  IAGAVKAAIQQCCNQLKSKIVKRIQAREQQERKKNLNKYIPNAAGAIYEVVKSTAELLMA 901
            IA AVK++IQQCC QLKSKIVK+IQAR QQERK+NL+KYIP+A GAIY+V++  A+L  +
Sbjct: 530  IASAVKSSIQQCCIQLKSKIVKKIQARVQQERKRNLSKYIPDATGAIYDVLREMAQLHAS 589

Query: 902  KRKRFEVEDSEVLKKVYYGEITKETYCEKLTQHVEQVDYEMALEYATQSGVNEEPRENIY 1081
            K+KR+E ED++VL+KV    ITK+T  EKL +HVEQVDYEMALEYATQSGV+EEPRE IY
Sbjct: 590  KKKRYEDEDADVLRKVSTHSITKQTLSEKLAKHVEQVDYEMALEYATQSGVSEEPREAIY 649

Query: 1082 IGSLEAQTNYVDFHSPVFVFRMF 1150
            + SLE   N++DFHSPVF FR++
Sbjct: 650  LQSLEDGKNFIDFHSPVFAFRLY 672


>ref|XP_003597480.1| DNA topoisomerase 6 subunit B [Medicago truncatula]
            gi|355486528|gb|AES67731.1| DNA topoisomerase 6 subunit B
            [Medicago truncatula]
          Length = 671

 Score =  614 bits (1583), Expect = e-173
 Identities = 301/383 (78%), Positives = 347/383 (90%)
 Frame = +2

Query: 2    QFLFRFIAEAQDKNVTVKFARRTDVMPPIPLETKYHPSAVDLLLIKRLIAETSTQNLLQF 181
            QF F+F+++A DKNVTV+FARRTDVMPPIPLETK+HPS+VDLLLIKRLI ETS QNLLQF
Sbjct: 288  QFQFKFVSDAPDKNVTVRFARRTDVMPPIPLETKHHPSSVDLLLIKRLITETSKQNLLQF 347

Query: 182  LQREFVNVNKPLAERLIGEMGPDFSAKMSVKSLSSEQIVRIHQLFRQAKFDDPSGDCLSP 361
            LQ EFVN++KP AERLIGEMGPDFS+KM+VKSL+S+Q+VRIHQLFRQAKFDDPSG CLSP
Sbjct: 348  LQHEFVNISKPHAERLIGEMGPDFSSKMAVKSLTSQQLVRIHQLFRQAKFDDPSGHCLSP 407

Query: 362  AGEYNLRLGIIKELHPDMVATYSGSPQVFEGHPFLVEAGVSIGGKDVKHGLNIFRFANRI 541
            AGEYNLRLGIIKELHPDMVATYSGS QVFEGHPF+VEAGVS+GGKDVK GLNIFRFANRI
Sbjct: 408  AGEYNLRLGIIKELHPDMVATYSGSAQVFEGHPFIVEAGVSVGGKDVKQGLNIFRFANRI 467

Query: 542  PLLFEQGADVVTRTALRRINWNSYKINQTQDKIGVFVSIVSTKIPFKGTGKEYIGDDISE 721
            PLLFEQGADVVTRTAL+RINW+SYKINQ QDKIGVFVSIVSTKIPFKGTGKEYIGDDI+E
Sbjct: 468  PLLFEQGADVVTRTALKRINWSSYKINQVQDKIGVFVSIVSTKIPFKGTGKEYIGDDITE 527

Query: 722  IAGAVKAAIQQCCNQLKSKIVKRIQAREQQERKKNLNKYIPNAAGAIYEVVKSTAELLMA 901
            IA AVK+AIQQCC QLKSKI+KRIQAREQQERK+NL++YIP+A+GA Y V+K    L  +
Sbjct: 528  IASAVKSAIQQCCIQLKSKIMKRIQAREQQERKRNLSRYIPDASGAFYNVLKQMLPLNPS 587

Query: 902  KRKRFEVEDSEVLKKVYYGEITKETYCEKLTQHVEQVDYEMALEYATQSGVNEEPRENIY 1081
            K+ R+  +D E+L+K+    +TKET+ EKL +HVEQVDYEMALE+ATQSGV+EEPRE IY
Sbjct: 588  KKSRYGDDDVELLRKISEDLVTKETFSEKLAKHVEQVDYEMALEFATQSGVSEEPRETIY 647

Query: 1082 IGSLEAQTNYVDFHSPVFVFRMF 1150
            I +L+A+   +D H+P+FVFR+F
Sbjct: 648  IQALDAENKTIDLHAPIFVFRVF 670


>ref|NP_188714.2| DNA topoisomerase 6 subunit B [Arabidopsis thaliana]
            gi|75169001|sp|Q9C5V6.1|TOP6B_ARATH RecName: Full=DNA
            topoisomerase 6 subunit B; Short=AtTOP6B; AltName:
            Full=Protein BRASSINOSTEROID INSENSITIVE 3; AltName:
            Full=Protein ELONGATED HYPOCOTYL 6; AltName: Full=Protein
            ROOT HAIRLESS 3 gi|12331188|emb|CAC24690.1| topoisomerase
            6 subunit B [Arabidopsis thaliana]
            gi|332642901|gb|AEE76422.1| DNA topoisomerase 6 subunit B
            [Arabidopsis thaliana]
          Length = 670

 Score =  606 bits (1562), Expect = e-171
 Identities = 302/383 (78%), Positives = 341/383 (89%), Gaps = 1/383 (0%)
 Frame = +2

Query: 2    QFLFRFIAEAQDKNVTVKFARRTDVMPPIPLETKYHPSAVDLLLIKRLIAETSTQNLLQF 181
            QFLFRFI+E  +KNVT+KF RRTDVMPPIP+ETK+HPS+VDLLLIKRLI +TS + LLQF
Sbjct: 286  QFLFRFISETPEKNVTIKFTRRTDVMPPIPIETKHHPSSVDLLLIKRLITDTSKKTLLQF 345

Query: 182  LQREFVNVNKPLAERLIGEMGPDFSAKMSVKSLSSEQIVRIHQLFRQAKFDDPSGDCLSP 361
            LQ EFVN+NK LA RLIGEMGPDF   M+VKS++S+Q+VRIHQLFRQAKFDDPSGDCLSP
Sbjct: 346  LQNEFVNINKTLAARLIGEMGPDFGPSMAVKSVTSQQMVRIHQLFRQAKFDDPSGDCLSP 405

Query: 362  AGEYNLRLGIIKELHPDMVATYSGSPQVFEGHPFLVEAGVSIGGKDVKHGLNIFRFANRI 541
            AGEYNLRLGIIKELHPDMVATYSGS QVFEGHPF+VEAGVS+GG+DVK G+NIFRFANRI
Sbjct: 406  AGEYNLRLGIIKELHPDMVATYSGSAQVFEGHPFIVEAGVSLGGRDVKQGINIFRFANRI 465

Query: 542  PLLFEQGADVVTRTALRRINWNSYKINQTQDKIGVFVSIVSTKIPFKGTGKEYIGDDISE 721
            PLLFEQGADVVTRTAL+RINWNSYKINQTQDKIGVFVSIVSTKIPFKGTGKEYIGDDISE
Sbjct: 466  PLLFEQGADVVTRTALKRINWNSYKINQTQDKIGVFVSIVSTKIPFKGTGKEYIGDDISE 525

Query: 722  IAGAVKAAIQQCCNQLKSKIVKRIQAREQQERKKNLNKYIPNAAGAIYEVVKSTAELLMA 901
            IA AVK+AIQQCC QLKSKIVKR+QAREQQERK++L++YIP+A GA+YEV+K   E    
Sbjct: 526  IATAVKSAIQQCCIQLKSKIVKRLQAREQQERKRSLSRYIPDATGAVYEVLKQMTEEHKT 585

Query: 902  KRKRFEVEDSEVLKKVYYGEITKETYCEKLTQHVEQVDYEMALEYATQSGVNEEPRENIY 1081
            KRKR+  ED  +L KV    ITKET  EKL +HVEQVDYEMALEYATQSGV+EEPRENIY
Sbjct: 586  KRKRYGEEDIVMLDKVSKQIITKETLKEKLAEHVEQVDYEMALEYATQSGVSEEPRENIY 645

Query: 1082 IGSLEA-QTNYVDFHSPVFVFRM 1147
            +  L+  ++N++D HSP FVFR+
Sbjct: 646  LQHLDPNKSNFIDLHSPTFVFRL 668


>ref|XP_003543555.1| PREDICTED: DNA topoisomerase 6 subunit B-like isoform 1 [Glycine max]
          Length = 673

 Score =  603 bits (1555), Expect = e-170
 Identities = 297/383 (77%), Positives = 343/383 (89%)
 Frame = +2

Query: 2    QFLFRFIAEAQDKNVTVKFARRTDVMPPIPLETKYHPSAVDLLLIKRLIAETSTQNLLQF 181
            QFLF+F+++A DKNV+++FARRTDVMPPIP+ETK+HPS+VDLLLIKRLIAETS QNLLQF
Sbjct: 290  QFLFKFVSDAPDKNVSIRFARRTDVMPPIPMETKHHPSSVDLLLIKRLIAETSKQNLLQF 349

Query: 182  LQREFVNVNKPLAERLIGEMGPDFSAKMSVKSLSSEQIVRIHQLFRQAKFDDPSGDCLSP 361
            LQ EFVN++K  AERLIGEMGPDF +KM+VKSL+S+Q+VRIHQL RQAKFDDPSG CLSP
Sbjct: 350  LQHEFVNISKSYAERLIGEMGPDFGSKMTVKSLTSQQLVRIHQLLRQAKFDDPSGHCLSP 409

Query: 362  AGEYNLRLGIIKELHPDMVATYSGSPQVFEGHPFLVEAGVSIGGKDVKHGLNIFRFANRI 541
            AGEYNLRLGIIKELHPDMVATYSGS QVFEGHPF+VEAGVS+GGK+VK GLNIFRFANRI
Sbjct: 410  AGEYNLRLGIIKELHPDMVATYSGSAQVFEGHPFIVEAGVSVGGKNVKQGLNIFRFANRI 469

Query: 542  PLLFEQGADVVTRTALRRINWNSYKINQTQDKIGVFVSIVSTKIPFKGTGKEYIGDDISE 721
            PLLFEQGADVVTRTA +RINW+SYKINQ QDKIGVFVSIVSTKIPFKGTGKEYIGDDI+E
Sbjct: 470  PLLFEQGADVVTRTAHKRINWSSYKINQMQDKIGVFVSIVSTKIPFKGTGKEYIGDDITE 529

Query: 722  IAGAVKAAIQQCCNQLKSKIVKRIQAREQQERKKNLNKYIPNAAGAIYEVVKSTAELLMA 901
            IA AVK AIQQCC QLKSKIVK++ AREQQERK+NL++YIP+A+GA+Y V+K   +L  +
Sbjct: 530  IASAVKYAIQQCCVQLKSKIVKKMHAREQQERKRNLSRYIPDASGAVYNVLKEMTQLHAS 589

Query: 902  KRKRFEVEDSEVLKKVYYGEITKETYCEKLTQHVEQVDYEMALEYATQSGVNEEPRENIY 1081
            K+ R+  +D+E+L KV    ITKET CEKL++HVEQVDYEMALEYATQSGV+EEPRE IY
Sbjct: 590  KKIRYGDDDAELLSKVSENLITKETLCEKLSKHVEQVDYEMALEYATQSGVSEEPRETIY 649

Query: 1082 IGSLEAQTNYVDFHSPVFVFRMF 1150
            I SLEA+   +D  +P  VFR+F
Sbjct: 650  IQSLEAENKMIDLQTPFIVFRVF 672


>ref|XP_004142138.1| PREDICTED: DNA topoisomerase 6 subunit B-like [Cucumis sativus]
            gi|449525918|ref|XP_004169963.1| PREDICTED: DNA
            topoisomerase 6 subunit B-like [Cucumis sativus]
          Length = 696

 Score =  598 bits (1543), Expect = e-169
 Identities = 301/405 (74%), Positives = 343/405 (84%), Gaps = 23/405 (5%)
 Frame = +2

Query: 2    QFLFRFIAEAQDKNVTVKFARRTDVMPPIPLETKYHPSAVDLLLIKRLIAETSTQNLLQF 181
            QFLFRF+++  DKN+T++F+RRTDVMPP+PLETK+HPSAVDLLLIKRLIAET+ QNLLQF
Sbjct: 290  QFLFRFVSDTPDKNITIRFSRRTDVMPPVPLETKHHPSAVDLLLIKRLIAETAKQNLLQF 349

Query: 182  LQREFVNVNKPLAERLIGEMGPDFSAKMSVKSLSSEQIVRIHQLFRQAKFDDPSGDCLSP 361
            LQ EFVN+ KP AERLIGEMGP+FS KMSVKSL+S+QIVRIHQLFRQAKFDDPSGDCLSP
Sbjct: 350  LQHEFVNIGKPFAERLIGEMGPEFSPKMSVKSLTSQQIVRIHQLFRQAKFDDPSGDCLSP 409

Query: 362  AGEYNLRLGIIKELHPDMVATYSG-----------------------SPQVFEGHPFLVE 472
            AGEYNLRLGIIKELHPDMVATYSG                       S QVFEGHPF+VE
Sbjct: 410  AGEYNLRLGIIKELHPDMVATYSGRLYLNLELCKLSSKYVNLMSNVDSAQVFEGHPFIVE 469

Query: 473  AGVSIGGKDVKHGLNIFRFANRIPLLFEQGADVVTRTALRRINWNSYKINQTQDKIGVFV 652
            AGVSIGGKDVK GLNIFRFANRIPLLFEQGADVVTRTAL+RINWNSYKINQ QDKIGVFV
Sbjct: 470  AGVSIGGKDVKQGLNIFRFANRIPLLFEQGADVVTRTALKRINWNSYKINQAQDKIGVFV 529

Query: 653  SIVSTKIPFKGTGKEYIGDDISEIAGAVKAAIQQCCNQLKSKIVKRIQAREQQERKKNLN 832
            SIVSTKIPFKGTGKEYIGDDISEIA AVK+AIQQCC QLKSKIVK+IQAREQQERK+NL+
Sbjct: 530  SIVSTKIPFKGTGKEYIGDDISEIASAVKSAIQQCCIQLKSKIVKKIQAREQQERKRNLS 589

Query: 833  KYIPNAAGAIYEVVKSTAELLMAKRKRFEVEDSEVLKKVYYGEITKETYCEKLTQHVEQV 1012
            +YIP+A  A+Y V+K  A++  +K+KR + ED+E+L KV    IT ET  +KL QHVEQV
Sbjct: 590  RYIPDATNAVYNVLKEMAQVHASKKKRHDCEDAEILSKVSARLITNETLRDKLAQHVEQV 649

Query: 1013 DYEMALEYATQSGVNEEPRENIYIGSLEAQTNYVDFHSPVFVFRM 1147
            D+EMA+EYATQSG + E +E +YI SL+A  ++ DF SP+FVFR+
Sbjct: 650  DHEMAMEYATQSGASAEAKEEMYIQSLDATHSFTDFQSPLFVFRL 694