BLASTX nr result

ID: Lithospermum22_contig00020891 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00020891
         (1546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279503.1| PREDICTED: probable ATP-dependent RNA helica...   529   e-148
emb|CAN73493.1| hypothetical protein VITISV_017477 [Vitis vinifera]   522   e-145
ref|XP_002299703.1| predicted protein [Populus trichocarpa] gi|2...   505   e-140
ref|XP_003529720.1| PREDICTED: putative ATP-dependent RNA helica...   494   e-137
ref|XP_003604480.1| ATP-dependent RNA helicase chl1 [Medicago tr...   490   e-136

>ref|XP_002279503.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Vitis
            vinifera]
          Length = 961

 Score =  529 bits (1363), Expect = e-148
 Identities = 265/424 (62%), Positives = 326/424 (76%), Gaps = 4/424 (0%)
 Frame = +2

Query: 119  LYQVSGYGEKLAVSENPSSY----ENNEDTSTLSSFRALTAMLLSLTYKDGDGRIIVSRT 286
            +++VSGYG+K+A     S+     E+NE+ STLS FRA   ML SLT  DGDG+II+SR 
Sbjct: 541  IHKVSGYGDKVAYLRKGSALNDGGESNEEGSTLSGFRAFVDMLQSLTNNDGDGKIIISRA 600

Query: 287  HTTGTGQNNGSLKYVMLTGEKLFHELHETW*IVDQAHAVILAGGTLQPIEETKERLFPWL 466
                +GQ  G LKYVMLTGEK+F E      IVDQAHAVILAGGTLQPIEET+ERLFPWL
Sbjct: 601  KQACSGQQGGYLKYVMLTGEKIFSE------IVDQAHAVILAGGTLQPIEETRERLFPWL 654

Query: 467  STNQLNFFSCGHIIPSENILPLAVSHGPSGQLFDFSYNSRGSTSMIQELGLMLCNLXXXX 646
            +++Q +FFSC HIIP E+ILP+A+SHGPSGQ FDFSY+SR S+ MI+ELGL+LCNL    
Sbjct: 655  TSDQFHFFSCSHIIPPESILPVALSHGPSGQSFDFSYSSRSSSIMIEELGLLLCNLVTVV 714

Query: 647  XXXXXXXXXXXXXXXKIYNIWKDLGILARLMKKKHIFREPRKSTDVELVLKKYQETIVQS 826
                           ++++ WK  GIL R+MKKK +FREPRK+TDVE VLK+Y+E I +S
Sbjct: 715  PEGIVVFFSSFDYEGQVHDAWKASGILERIMKKKCVFREPRKNTDVEFVLKEYKEAIDKS 774

Query: 827  SQPDSRNDTSACNGAVLLAVVGGKISEGINFSDGMGRCIIMVGLPYPNPSDIELMERLKH 1006
            S  + + D    NGA+LLAVVGGKISEGINFSDGMGRCI+MVGLPYP+PSDIEL+ER+K+
Sbjct: 775  SDRNQKEDPVPQNGAILLAVVGGKISEGINFSDGMGRCIVMVGLPYPSPSDIELLERVKY 834

Query: 1007 IEGIRDSPTQNALRPLARAECYNGNVQAGFDILKSCKHRGKQYYDNLCMKAVNQSIGRAI 1186
            IEG+  S +  + +     E ++G+VQ GFDIL+SCKHRGK+YY+NLCMKAVNQSIGRAI
Sbjct: 835  IEGLGVSISSRSTKFSVGNEYFSGDVQVGFDILRSCKHRGKEYYENLCMKAVNQSIGRAI 894

Query: 1187 RHANDYAAILLVDGRYASDPLKNTFSHPTTKLPQWIRNQLIPKTENYGEVHKLLHRFFKL 1366
            RH NDYAAILLVD RYASDPLK +FSHPT KLPQWI++ L+P T  YGE H+LLH+FFK 
Sbjct: 895  RHINDYAAILLVDARYASDPLKRSFSHPTNKLPQWIKDCLVPVTGKYGEAHRLLHQFFKF 954

Query: 1367 HRMK 1378
            ++ +
Sbjct: 955  NKKR 958


>emb|CAN73493.1| hypothetical protein VITISV_017477 [Vitis vinifera]
          Length = 914

 Score =  522 bits (1344), Expect = e-145
 Identities = 264/424 (62%), Positives = 324/424 (76%), Gaps = 4/424 (0%)
 Frame = +2

Query: 119  LYQVSGYGEKLAVSENPSSY----ENNEDTSTLSSFRALTAMLLSLTYKDGDGRIIVSRT 286
            +++VSGYG+K+A     S+     E+N + STLS FRA   ML SLT  DGDG+II+SR 
Sbjct: 494  IHKVSGYGDKVANLXKGSALNDGGESNXEGSTLSGFRAFVDMLQSLTNNDGDGKIIISRA 553

Query: 287  HTTGTGQNNGSLKYVMLTGEKLFHELHETW*IVDQAHAVILAGGTLQPIEETKERLFPWL 466
                +GQ  G LKYVMLTGEK+F E      IVDQAHAVILAGGTLQPIEET+ERLFP L
Sbjct: 554  KQACSGQQGGYLKYVMLTGEKIFSE------IVDQAHAVILAGGTLQPIEETRERLFPRL 607

Query: 467  STNQLNFFSCGHIIPSENILPLAVSHGPSGQLFDFSYNSRGSTSMIQELGLMLCNLXXXX 646
            +++Q +FFSC HIIP E+ILP+A+SHGPSGQ FDFSY+SR S+ MI+ELGL+LCNL    
Sbjct: 608  TSDQFHFFSCSHIIPPESILPVALSHGPSGQSFDFSYSSRSSSIMIEELGLLLCNLVTVV 667

Query: 647  XXXXXXXXXXXXXXXKIYNIWKDLGILARLMKKKHIFREPRKSTDVELVLKKYQETIVQS 826
                           ++++ WK  GIL R+MKKK +FREPRK+TDVE VLK+Y+E I +S
Sbjct: 668  PEGIVVFFSSFDYEGQVHDAWKASGILERIMKKKCVFREPRKNTDVEFVLKEYKEAIDKS 727

Query: 827  SQPDSRNDTSACNGAVLLAVVGGKISEGINFSDGMGRCIIMVGLPYPNPSDIELMERLKH 1006
            S  + + D    NGA+LLAVVGGKISEGINFSDGMGRCI+MVGLPYP+PSDIEL+ER+K+
Sbjct: 728  SDRNQKEDPVPQNGAILLAVVGGKISEGINFSDGMGRCIVMVGLPYPSPSDIELLERVKY 787

Query: 1007 IEGIRDSPTQNALRPLARAECYNGNVQAGFDILKSCKHRGKQYYDNLCMKAVNQSIGRAI 1186
            IEG+  S +  + +     E Y+G+VQ GFDIL+SCKHRGK+YY+NLCMKAVNQSIGRAI
Sbjct: 788  IEGLGVSISSRSTKFSVGNEYYSGDVQVGFDILRSCKHRGKEYYENLCMKAVNQSIGRAI 847

Query: 1187 RHANDYAAILLVDGRYASDPLKNTFSHPTTKLPQWIRNQLIPKTENYGEVHKLLHRFFKL 1366
            RH NDYAAILLVD RYASDPLK +FSHPT KLPQWI++ L+P T  YGE H+LLH+FFK 
Sbjct: 848  RHINDYAAILLVDARYASDPLKRSFSHPTNKLPQWIKDCLVPVTGKYGEAHRLLHQFFKF 907

Query: 1367 HRMK 1378
            ++ +
Sbjct: 908  NKKR 911


>ref|XP_002299703.1| predicted protein [Populus trichocarpa] gi|222846961|gb|EEE84508.1|
            predicted protein [Populus trichocarpa]
          Length = 918

 Score =  505 bits (1300), Expect = e-140
 Identities = 259/425 (60%), Positives = 316/425 (74%), Gaps = 4/425 (0%)
 Frame = +2

Query: 119  LYQVSGYGEKLAVSENPSSYENN----EDTSTLSSFRALTAMLLSLTYKDGDGRIIVSRT 286
            +++VSGYGEK+A  +   +   N    E+ STLSSFRAL  ML+SLT  DGDGR+I+S+ 
Sbjct: 499  VHKVSGYGEKVASLQEGLALNRNGEFGEEGSTLSSFRALVDMLMSLTNNDGDGRMIISKM 558

Query: 287  HTTGTGQNNGSLKYVMLTGEKLFHELHETW*IVDQAHAVILAGGTLQPIEETKERLFPWL 466
             +T +G   G LKYVMLTGEK+F E      IVD+AHAVILAGGTLQPIEET+ERLFPWL
Sbjct: 559  RSTCSGLQGGFLKYVMLTGEKIFSE------IVDEAHAVILAGGTLQPIEETRERLFPWL 612

Query: 467  STNQLNFFSCGHIIPSENILPLAVSHGPSGQLFDFSYNSRGSTSMIQELGLMLCNLXXXX 646
              NQL+FFSC HI+P E+ILP+AVS GPSGQ FDFSY+SR S  MI+ELGL+LCNL    
Sbjct: 613  PPNQLHFFSCSHIVPPESILPIAVSRGPSGQSFDFSYSSRSSLVMIEELGLLLCNLVAFV 672

Query: 647  XXXXXXXXXXXXXXXKIYNIWKDLGILARLMKKKHIFREPRKSTDVELVLKKYQETIVQS 826
                           ++Y+ WK  GIL R+M+KK IFREPR ++DVEL+LK+Y+ETI   
Sbjct: 673  PEGIVVFFSSFEYEGQVYDSWKKSGILERIMRKKRIFREPRSNSDVELILKEYKETIDGL 732

Query: 827  SQPDSRNDTSACNGAVLLAVVGGKISEGINFSDGMGRCIIMVGLPYPNPSDIELMERLKH 1006
            S   ++ D    NGAVLLAVVGGKISEGINFSDGMGRCI+MVGLPYP+PSD+ELMER+K+
Sbjct: 733  SS-GTKEDGVRHNGAVLLAVVGGKISEGINFSDGMGRCIVMVGLPYPSPSDMELMERVKY 791

Query: 1007 IEGIRDSPTQNALRPLARAECYNGNVQAGFDILKSCKHRGKQYYDNLCMKAVNQSIGRAI 1186
            IE + +               YNG+VQ  F IL+SC+ RGK+YY+NLCMKAVNQSIGRAI
Sbjct: 792  IESLGEPNCGKRPEISVGEHYYNGDVQTAFSILRSCRRRGKEYYENLCMKAVNQSIGRAI 851

Query: 1187 RHANDYAAILLVDGRYASDPLKNTFSHPTTKLPQWIRNQLIPKTENYGEVHKLLHRFFKL 1366
            RH NDYAAILLVD RYASD  K +FSHPT KLP WI+++L+  T NYGEVH+LLH+FFK 
Sbjct: 852  RHINDYAAILLVDMRYASDSSKTSFSHPTNKLPLWIKDRLVSATNNYGEVHRLLHQFFKY 911

Query: 1367 HRMKE 1381
            ++ +E
Sbjct: 912  NKKRE 916


>ref|XP_003529720.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
            8-like [Glycine max]
          Length = 897

 Score =  494 bits (1272), Expect = e-137
 Identities = 244/422 (57%), Positives = 319/422 (75%), Gaps = 4/422 (0%)
 Frame = +2

Query: 119  LYQVSGYGEKLA-VSENPSSY---ENNEDTSTLSSFRALTAMLLSLTYKDGDGRIIVSRT 286
            +++V+GYGEK+A +++ P+ +   E  E+ S +S+F+AL  +LLSLT  DGDGRII+SR+
Sbjct: 478  MHKVNGYGEKVATLAKIPAIHIIGEQAEEGSCISAFQALADILLSLTNNDGDGRIIISRS 537

Query: 287  HTTGTGQNNGSLKYVMLTGEKLFHELHETW*IVDQAHAVILAGGTLQPIEETKERLFPWL 466
             +T   +  G +KYVML+GEK+F E      IVD+AHAV+L GGTLQPIEET+ERLFPWL
Sbjct: 538  RSTSFKKQGGHIKYVMLSGEKIFSE------IVDEAHAVVLVGGTLQPIEETRERLFPWL 591

Query: 467  STNQLNFFSCGHIIPSENILPLAVSHGPSGQLFDFSYNSRGSTSMIQELGLMLCNLXXXX 646
              NQL+FFSCGHI+P ++I+P+AV+ GP+G+ FDFS++SR S  M++ELGL+LCNL    
Sbjct: 592  PPNQLHFFSCGHIVPPDSIMPIAVTRGPTGRSFDFSFSSRSSPDMMRELGLLLCNLVTVV 651

Query: 647  XXXXXXXXXXXXXXXKIYNIWKDLGILARLMKKKHIFREPRKSTDVELVLKKYQETIVQS 826
                           ++Y  WK  GIL R++K+K +FREPR + DVE VLK+Y++TI   
Sbjct: 652  HEGIVVFFPSFDYENRVYEHWKSSGILERIIKRKRVFREPRNNMDVESVLKEYKDTIDTI 711

Query: 827  SQPDSRNDTSACNGAVLLAVVGGKISEGINFSDGMGRCIIMVGLPYPNPSDIELMERLKH 1006
            S  +S  + ++ NGA+LLAVVG K+SEGIN SDGMGRCI+MVGLPYP+PSDIEL+ER+KH
Sbjct: 712  SVMNSEVNQASHNGAILLAVVGAKLSEGINLSDGMGRCIVMVGLPYPSPSDIELLERIKH 771

Query: 1007 IEGIRDSPTQNALRPLARAECYNGNVQAGFDILKSCKHRGKQYYDNLCMKAVNQSIGRAI 1186
            IEG R+          +  + Y+G+VQ GFDIL+SC HRGK+YY+NLCMKAVNQSIGRAI
Sbjct: 772  IEGFRNLKLPENPSVSSSYDLYSGDVQGGFDILRSCSHRGKEYYENLCMKAVNQSIGRAI 831

Query: 1187 RHANDYAAILLVDGRYASDPLKNTFSHPTTKLPQWIRNQLIPKTENYGEVHKLLHRFFKL 1366
            RH NDYAAILLVD RYASD  K +FSHP TKLPQWI+++ +  T NYGEVH+LLH+FFKL
Sbjct: 832  RHINDYAAILLVDTRYASDSSKRSFSHPVTKLPQWIKDRFVSSTINYGEVHRLLHQFFKL 891

Query: 1367 HR 1372
             +
Sbjct: 892  KK 893


>ref|XP_003604480.1| ATP-dependent RNA helicase chl1 [Medicago truncatula]
            gi|355505535|gb|AES86677.1| ATP-dependent RNA helicase
            chl1 [Medicago truncatula]
          Length = 1129

 Score =  490 bits (1262), Expect = e-136
 Identities = 248/423 (58%), Positives = 313/423 (73%), Gaps = 5/423 (1%)
 Frame = +2

Query: 119  LYQVSGYGEKLAVSENPSSY----ENNEDTSTLSSFRALTAMLLSLTYKDGDGRIIVSRT 286
            +++VSGYGEK+A  E  S+     E+ ED S  S+F++L AMLLSL  KD DGR+I+SR+
Sbjct: 482  MHKVSGYGEKMATLEKVSALNITGEHGEDGSCQSAFQSLAAMLLSLVNKDSDGRMIISRS 541

Query: 287  HTTGTG-QNNGSLKYVMLTGEKLFHELHETW*IVDQAHAVILAGGTLQPIEETKERLFPW 463
             +T +  Q  G +KYVML+ EK+F E      IVD+AHAV+L GGTLQPIEET+ERLFPW
Sbjct: 542  SSTSSRKQGQGYIKYVMLSAEKIFSE------IVDEAHAVVLVGGTLQPIEETRERLFPW 595

Query: 464  LSTNQLNFFSCGHIIPSENILPLAVSHGPSGQLFDFSYNSRGSTSMIQELGLMLCNLXXX 643
            L  N+L+FFSCGHI+P E+ILP+AVS GP+G+ FDFSY+SR S  M+QELGL+LCNL   
Sbjct: 596  LPPNKLHFFSCGHIVPPESILPIAVSCGPTGRSFDFSYSSRSSADMMQELGLLLCNLVTV 655

Query: 644  XXXXXXXXXXXXXXXXKIYNIWKDLGILARLMKKKHIFREPRKSTDVELVLKKYQETIVQ 823
                            ++Y  W+  GIL R+ K+K +FREPR + DVE VLK+Y++TI  
Sbjct: 656  VPQGIVVFFPSFDYESRVYENWESSGILERITKRKRVFREPRNNMDVESVLKEYKDTIYT 715

Query: 824  SSQPDSRNDTSACNGAVLLAVVGGKISEGINFSDGMGRCIIMVGLPYPNPSDIELMERLK 1003
             S  +S  + ++  GAVLLAVVG K+SEGIN SDGMGRCIIMVGLPY +PSDIEL+ER+K
Sbjct: 716  PSSVNSEVNQASHTGAVLLAVVGAKLSEGINLSDGMGRCIIMVGLPYASPSDIELLERIK 775

Query: 1004 HIEGIRDSPTQNALRPLARAECYNGNVQAGFDILKSCKHRGKQYYDNLCMKAVNQSIGRA 1183
            HI+G R+S         A  + Y G++Q GFDIL+SC HRGK+YY+NLCMKAVNQSIGRA
Sbjct: 776  HIDGFRNSKFLENPGFSASYDVYGGDIQGGFDILRSCSHRGKEYYENLCMKAVNQSIGRA 835

Query: 1184 IRHANDYAAILLVDGRYASDPLKNTFSHPTTKLPQWIRNQLIPKTENYGEVHKLLHRFFK 1363
            IRH NDYAAILLVD RYASD  K +F+HPTTKLP WI+++L+  + NYGEVHKLL +FFK
Sbjct: 836  IRHINDYAAILLVDTRYASDSSKRSFTHPTTKLPNWIKDRLVSSSRNYGEVHKLLSQFFK 895

Query: 1364 LHR 1372
            L +
Sbjct: 896  LKK 898


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