BLASTX nr result

ID: Lithospermum22_contig00020889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00020889
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539528.1| PREDICTED: ras-related protein Rab11C-like i...   172   2e-41
ref|XP_003537971.1| PREDICTED: ras-related protein Rab11C-like [...   171   4e-41
gb|ACU24291.1| unknown [Glycine max]                                  171   4e-41
ref|XP_002307838.1| predicted protein [Populus trichocarpa] gi|2...   171   4e-41
sp|Q40193.1|RB11C_LOTJA RecName: Full=Ras-related protein Rab11C...   170   1e-40

>ref|XP_003539528.1| PREDICTED: ras-related protein Rab11C-like isoform 1 [Glycine max]
           gi|356542141|ref|XP_003539529.1| PREDICTED: ras-related
           protein Rab11C-like isoform 2 [Glycine max]
          Length = 216

 Score =  172 bits (437), Expect = 2e-41
 Identities = 85/107 (79%), Positives = 95/107 (88%)
 Frame = -2

Query: 487 ELREHADSNIVIMMTGNKSDLNHLRAVSDQDGQALAEKEGLSFLETSALEALNIDKAFST 308
           ELR+HADSNIVIMM GNKSDL+HLRAVS+ DGQALAE+EGLSFLETSALEA NI+KAF T
Sbjct: 109 ELRDHADSNIVIMMAGNKSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQT 168

Query: 307 ILTEIYQIISKKALAAQEAVTSYVLPSKGTTINVSDSSGNVKKGCCS 167
           ILTEIY I+SKKALAAQEA    +LP +GTTINV D+SGN K+GCCS
Sbjct: 169 ILTEIYHIVSKKALAAQEAAVGTILPGQGTTINVGDASGNTKRGCCS 215


>ref|XP_003537971.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
          Length = 216

 Score =  171 bits (434), Expect = 4e-41
 Identities = 85/107 (79%), Positives = 94/107 (87%)
 Frame = -2

Query: 487 ELREHADSNIVIMMTGNKSDLNHLRAVSDQDGQALAEKEGLSFLETSALEALNIDKAFST 308
           ELR+HADSNIVIMM GNKSDL+HLRAVS+ DGQALAE+EGLSFLETSALEA NI+KAF T
Sbjct: 109 ELRDHADSNIVIMMAGNKSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQT 168

Query: 307 ILTEIYQIISKKALAAQEAVTSYVLPSKGTTINVSDSSGNVKKGCCS 167
           ILTEIY I+SKKALAAQEA     LP +GTTINV D+SGN K+GCCS
Sbjct: 169 ILTEIYHIVSKKALAAQEAAVGTTLPGQGTTINVGDASGNTKRGCCS 215


>gb|ACU24291.1| unknown [Glycine max]
          Length = 216

 Score =  171 bits (434), Expect = 4e-41
 Identities = 85/107 (79%), Positives = 94/107 (87%)
 Frame = -2

Query: 487 ELREHADSNIVIMMTGNKSDLNHLRAVSDQDGQALAEKEGLSFLETSALEALNIDKAFST 308
           ELR+HADSNIVIMM GNKSDL+HLRAVS+ DGQALAE+EGLSFLETSALEA NI+KAF T
Sbjct: 109 ELRDHADSNIVIMMAGNKSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQT 168

Query: 307 ILTEIYQIISKKALAAQEAVTSYVLPSKGTTINVSDSSGNVKKGCCS 167
           ILTEIY I+SKKALAAQEA     LP +GTTINV D+SGN K+GCCS
Sbjct: 169 ILTEIYHIVSKKALAAQEAAVGTTLPGQGTTINVGDASGNTKRGCCS 215


>ref|XP_002307838.1| predicted protein [Populus trichocarpa] gi|222853814|gb|EEE91361.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  171 bits (434), Expect = 4e-41
 Identities = 85/107 (79%), Positives = 94/107 (87%)
 Frame = -2

Query: 487 ELREHADSNIVIMMTGNKSDLNHLRAVSDQDGQALAEKEGLSFLETSALEALNIDKAFST 308
           ELR+HADSNIVIMM GNKSDLNHLRAV ++DG ALAEKEGLSFLETSALEA NI+KAF T
Sbjct: 109 ELRDHADSNIVIMMAGNKSDLNHLRAVQEEDGHALAEKEGLSFLETSALEATNIEKAFQT 168

Query: 307 ILTEIYQIISKKALAAQEAVTSYVLPSKGTTINVSDSSGNVKKGCCS 167
           ILTEIY IISKK LAAQEA  +  +P +GTTINV+D+SGN KKGCCS
Sbjct: 169 ILTEIYHIISKKTLAAQEAAANSTVPGQGTTINVADASGNTKKGCCS 215


>sp|Q40193.1|RB11C_LOTJA RecName: Full=Ras-related protein Rab11C gi|1370146|emb|CAA98179.1|
           RAB11C [Lotus japonicus]
          Length = 216

 Score =  170 bits (431), Expect = 1e-40
 Identities = 85/107 (79%), Positives = 94/107 (87%)
 Frame = -2

Query: 487 ELREHADSNIVIMMTGNKSDLNHLRAVSDQDGQALAEKEGLSFLETSALEALNIDKAFST 308
           ELR+HADSNIVIMM GNKSDLNHLRAVS+ DG AL+EKEGLSFLETSALEA NI+KAF T
Sbjct: 109 ELRDHADSNIVIMMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQT 168

Query: 307 ILTEIYQIISKKALAAQEAVTSYVLPSKGTTINVSDSSGNVKKGCCS 167
           ILTEIY I+SKKALAAQEA     +P +GTTINV+D+SGN KKGCCS
Sbjct: 169 ILTEIYHIVSKKALAAQEATAGASVPGQGTTINVADTSGNTKKGCCS 215


Top