BLASTX nr result
ID: Lithospermum22_contig00020865
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00020865
(607 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 60 7e-18
gb|EEC69280.1| hypothetical protein OsI_38331 [Oryza sativa Indi... 60 9e-18
gb|AAX95129.1| retrotransposon protein, putative, unclassified [... 64 1e-14
gb|ABA91837.2| retrotransposon protein, putative, unclassified [... 64 1e-14
gb|EEE51789.1| hypothetical protein OsJ_33245 [Oryza sativa Japo... 64 1e-14
>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 59.7 bits (143), Expect(2) = 7e-18
Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Frame = -3
Query: 308 ERAKVNLISCLQDNRGIWHRKPHIQR-IVVQFYTELFTSQARRNHLDLSQLHLDRFNVEI 132
ER + N I+ L+ G W + +R ++++F+ +LFTS +N L + + + +
Sbjct: 617 ERRRRNRINKLRREDGSWVEREEDKRAMIIEFFKQLFTSNGGQNSQKLLDVVDRKVSGAM 676
Query: 131 VQKLQA*FTNAEVKQCLLSMHGTKAPGPDGMPALFFVA 18
+ L+A FT EVK+ L ++ KAPGPDGMPA F+ A
Sbjct: 677 NESLRAEFTREEVKEALDAIGDLKAPGPDGMPAGFYKA 714
Score = 56.2 bits (134), Expect(2) = 7e-18
Identities = 32/101 (31%), Positives = 50/101 (49%)
Frame = -2
Query: 597 GLTVFGSIRDCRLDLLKWKSETLVKVHSTIKEKEEALDTLQQGMISIASKERATVLSKEI 418
GL V S+ L W S L + +K+ ++ L+T ++ IS R VL +
Sbjct: 522 GLPVHASLAGVAAGLSSWSSNVLGDLEKRVKKVKKELETCRRQPISRDQVVREEVLRYRL 581
Query: 417 DKLRKADEIYWCQRLRDLCRVKGDRNTDFSHVVSTDRKGKS 295
+KL + +IYW QR KGDRNT F H ++R+ ++
Sbjct: 582 EKLEQQVDIYWKQRAHTNWLNKGDRNTSFFHASCSERRRRN 622
>gb|EEC69280.1| hypothetical protein OsI_38331 [Oryza sativa Indica Group]
Length = 320
Score = 59.7 bits (143), Expect(2) = 9e-18
Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Frame = -3
Query: 308 ERAKVNLISCLQDNRGIWHRKPHIQR-IVVQFYTELFTSQARRNHLDLSQLHLDRFNVEI 132
ER + N I+ L+ G W + +R ++++F+ +LFTS +N L + + + +
Sbjct: 163 ERRRRNRINKLRREDGSWVEREEDKRAMIIEFFKQLFTSNGGQNSQKLLDVVDRKVSGAM 222
Query: 131 VQKLQA*FTNAEVKQCLLSMHGTKAPGPDGMPALFFVA 18
+ L+A FT EVK+ L ++ KAPGPDGMPA F+ A
Sbjct: 223 NESLRAEFTREEVKEALDAIGDLKAPGPDGMPAGFYKA 260
Score = 55.8 bits (133), Expect(2) = 9e-18
Identities = 32/101 (31%), Positives = 50/101 (49%)
Frame = -2
Query: 597 GLTVFGSIRDCRLDLLKWKSETLVKVHSTIKEKEEALDTLQQGMISIASKERATVLSKEI 418
GL V S+ L W S L + +K+ ++ L+T ++ IS R VL +
Sbjct: 68 GLPVHASLAGVAAGLSSWSSNVLGDLEKRVKKVKKELETCRRQPISRDPVVREEVLRYRL 127
Query: 417 DKLRKADEIYWCQRLRDLCRVKGDRNTDFSHVVSTDRKGKS 295
+KL + +IYW QR KGDRNT F H ++R+ ++
Sbjct: 128 EKLEQQVDIYWKQRAHTNWLNKGDRNTSFFHASCSERRRRN 168
>gb|AAX95129.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|62733115|gb|AAX95232.1|
retrotransposon protein, putative, unclassified [Oryza
sativa Japonica Group]
Length = 1324
Score = 63.5 bits (153), Expect(2) = 1e-14
Identities = 34/101 (33%), Positives = 54/101 (53%)
Frame = -2
Query: 597 GLTVFGSIRDCRLDLLKWKSETLVKVHSTIKEKEEALDTLQQGMISIASKERATVLSKEI 418
G V +IR+ +L W L + IK+ ++AL+ ++ IS ++ R VL +
Sbjct: 722 GGKVMDAIREVAANLWDWSKNFLGDLEKRIKKAKQALEAHRRSPISSSTASREAVLKYRL 781
Query: 417 DKLRKADEIYWCQRLRDLCRVKGDRNTDFSHVVSTDRKGKS 295
DKL + E+YW QR KGDRNT F H +++RK ++
Sbjct: 782 DKLEEQRELYWRQRANQHWLEKGDRNTKFFHECASERKKRN 822
Score = 41.2 bits (95), Expect(2) = 1e-14
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Frame = -3
Query: 308 ERAKVNLISCLQDNRG-IWHRKPHIQRIVVQFYTELFTSQARRNHLDLSQLHLDRFNVEI 132
ER K N I L+ + G + + ++ +FY +LFT+ N +L Q R +
Sbjct: 817 ERKKRNKIKKLRRDDGEVITDEAGSLSLISEFYKQLFTAGVPLNLDELLQNVPKRVTSTM 876
Query: 131 VQKLQA*FTNAEVKQCLLSMHGTKA-PGPDGMPALFF 24
+L T E+K+ L S+ KA PG DGMPALF+
Sbjct: 877 NDELMKGVTTEEIKKALDSIGDLKAPPGSDGMPALFY 913
>gb|ABA91837.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1301
Score = 63.5 bits (153), Expect(2) = 1e-14
Identities = 34/101 (33%), Positives = 54/101 (53%)
Frame = -2
Query: 597 GLTVFGSIRDCRLDLLKWKSETLVKVHSTIKEKEEALDTLQQGMISIASKERATVLSKEI 418
G V +IR+ +L W L + IK+ ++AL+ ++ IS ++ R VL +
Sbjct: 699 GGKVMDAIREVAANLWDWSKNFLGDLEKRIKKAKQALEAHRRSPISSSTASREAVLKYRL 758
Query: 417 DKLRKADEIYWCQRLRDLCRVKGDRNTDFSHVVSTDRKGKS 295
DKL + E+YW QR KGDRNT F H +++RK ++
Sbjct: 759 DKLEEQRELYWRQRANQHWLEKGDRNTKFFHECASERKKRN 799
Score = 41.2 bits (95), Expect(2) = 1e-14
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Frame = -3
Query: 308 ERAKVNLISCLQDNRG-IWHRKPHIQRIVVQFYTELFTSQARRNHLDLSQLHLDRFNVEI 132
ER K N I L+ + G + + ++ +FY +LFT+ N +L Q R +
Sbjct: 794 ERKKRNKIKKLRRDDGEVITDEAGSLSLISEFYKQLFTAGVPLNLDELLQNVPKRVTSTM 853
Query: 131 VQKLQA*FTNAEVKQCLLSMHGTKA-PGPDGMPALFF 24
+L T E+K+ L S+ KA PG DGMPALF+
Sbjct: 854 NDELMKGVTTEEIKKALDSIGDLKAPPGSDGMPALFY 890
>gb|EEE51789.1| hypothetical protein OsJ_33245 [Oryza sativa Japonica Group]
Length = 825
Score = 63.5 bits (153), Expect(2) = 1e-14
Identities = 34/101 (33%), Positives = 54/101 (53%)
Frame = -2
Query: 597 GLTVFGSIRDCRLDLLKWKSETLVKVHSTIKEKEEALDTLQQGMISIASKERATVLSKEI 418
G V +IR+ +L W L + IK+ ++AL+ ++ IS ++ R VL +
Sbjct: 223 GGKVMDAIREVAANLWDWSKNFLGDLEKRIKKAKQALEAHRRSPISSSTASREAVLKYRL 282
Query: 417 DKLRKADEIYWCQRLRDLCRVKGDRNTDFSHVVSTDRKGKS 295
DKL + E+YW QR KGDRNT F H +++RK ++
Sbjct: 283 DKLEEQRELYWRQRANQHWLEKGDRNTKFFHECASERKKRN 323
Score = 41.2 bits (95), Expect(2) = 1e-14
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Frame = -3
Query: 308 ERAKVNLISCLQDNRG-IWHRKPHIQRIVVQFYTELFTSQARRNHLDLSQLHLDRFNVEI 132
ER K N I L+ + G + + ++ +FY +LFT+ N +L Q R +
Sbjct: 318 ERKKRNKIKKLRRDDGEVITDEAGSLSLISEFYKQLFTAGVPLNLDELLQNVPKRVTSTM 377
Query: 131 VQKLQA*FTNAEVKQCLLSMHGTKA-PGPDGMPALFF 24
+L T E+K+ L S+ KA PG DGMPALF+
Sbjct: 378 NDELMKGVTTEEIKKALDSIGDLKAPPGSDGMPALFY 414