BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00020848
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002872527.1| RNA-binding protein 37 [Arabidopsis lyrata s...    67   1e-09
ref|NP_192799.1| CTC-interacting domain 12 protein [Arabidopsis ...    67   1e-09
ref|XP_002518926.1| RNA-binding protein, putative [Ricinus commu...    66   3e-09
ref|XP_001763710.1| predicted protein [Physcomitrella patens sub...    66   3e-09
ref|XP_001775735.1| predicted protein [Physcomitrella patens sub...    66   3e-09

>ref|XP_002872527.1| RNA-binding protein 37 [Arabidopsis lyrata subsp. lyrata]
           gi|297318364|gb|EFH48786.1| RNA-binding protein 37
           [Arabidopsis lyrata subsp. lyrata]
          Length = 336

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/42 (80%), Positives = 35/42 (83%)
 Frame = +2

Query: 2   VMAESAILALNFSGAVLGSLPIRVSPSKTPVRQRATPRSPMH 127
           VMAESAI ALN SG +LGSLPIRVSPSKTPVR RA PR  MH
Sbjct: 295 VMAESAIAALNCSGVLLGSLPIRVSPSKTPVRSRAVPRHQMH 336


>ref|NP_192799.1| CTC-interacting domain 12 protein [Arabidopsis thaliana]
           gi|4115925|gb|AAD03436.1| contains similarity to RNA
           recognition motifs (Pfam: PF00076, Score=5.5e-23, N=2)
           [Arabidopsis thaliana] gi|4539439|emb|CAB40027.1|
           RNA-binding protein [Arabidopsis thaliana]
           gi|4959384|gb|AAD34325.1| RNA-binding protein
           [Arabidopsis thaliana] gi|7267758|emb|CAB78184.1|
           RNA-binding protein [Arabidopsis thaliana]
           gi|14517528|gb|AAK62654.1| AT4g10610/T4F9_70
           [Arabidopsis thaliana] gi|18700204|gb|AAL77712.1|
           AT4g10610/T4F9_70 [Arabidopsis thaliana]
           gi|21592407|gb|AAM64358.1| RNA-binding protein
           [Arabidopsis thaliana] gi|332657507|gb|AEE82907.1|
           CTC-interacting domain 12 protein [Arabidopsis thaliana]
          Length = 336

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 34/42 (80%), Positives = 35/42 (83%)
 Frame = +2

Query: 2   VMAESAILALNFSGAVLGSLPIRVSPSKTPVRQRATPRSPMH 127
           VMAESAI ALN SG +LGSLPIRVSPSKTPVR RA PR  MH
Sbjct: 295 VMAESAIAALNCSGVLLGSLPIRVSPSKTPVRSRAIPRHQMH 336


>ref|XP_002518926.1| RNA-binding protein, putative [Ricinus communis]
           gi|223541913|gb|EEF43459.1| RNA-binding protein,
           putative [Ricinus communis]
          Length = 379

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/42 (85%), Positives = 36/42 (85%)
 Frame = +2

Query: 2   VMAESAILALNFSGAVLGSLPIRVSPSKTPVRQRATPRSPMH 127
           VMAESAI ALN SG VLGSLPIRVSPSKTPVR RA PR PMH
Sbjct: 339 VMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRA-PRIPMH 379


>ref|XP_001763710.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162685203|gb|EDQ71600.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 213

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = +2

Query: 2   VMAESAILALNFSGAVLGSLPIRVSPSKTPVRQRATPRSPMH 127
           VMAESA+ ALN SGA+LGSLPIRVSPSKTPVR R +PRSP+H
Sbjct: 173 VMAESAMAALNCSGAILGSLPIRVSPSKTPVRPR-SPRSPLH 213


>ref|XP_001775735.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162672887|gb|EDQ59418.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 256

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = +2

Query: 2   VMAESAILALNFSGAVLGSLPIRVSPSKTPVRQRATPRSPMH 127
           VMAESA+ ALN SGA+LGSLPIRVSPSKTPVR R +PRSP+H
Sbjct: 216 VMAESAMAALNCSGAILGSLPIRVSPSKTPVRPR-SPRSPLH 256