BLASTX nr result

ID: Lithospermum22_contig00020791 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00020791
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534949.1| conserved hypothetical protein [Ricinus comm...    80   8e-22
ref|XP_002527161.1| cytochrome C oxidase, subunit II, putative [...   102   4e-20
gb|ABV23661.1| cytochrome oxidase subunit 2 [Boehmeria nivea] gi...    76   3e-12

>ref|XP_002534949.1| conserved hypothetical protein [Ricinus communis]
           gi|223524315|gb|EEF27434.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 90

 Score = 79.7 bits (195), Expect(2) = 8e-22
 Identities = 43/60 (71%), Positives = 44/60 (73%)
 Frame = -2

Query: 257 MPSTRALLATNHSLAGCSGSAFQVRYPNRLLCSTGSLAPXXXXXXXXXXXXXXLQPLAVI 78
           MPSTRALLATNHSLAG  GSAFQVRYPNRLLCSTGSLAP              LQPLAV+
Sbjct: 1   MPSTRALLATNHSLAGRLGSAFQVRYPNRLLCSTGSLAPSSILSTALLLGSLQLQPLAVL 60



 Score = 48.9 bits (115), Expect(2) = 8e-22
 Identities = 23/25 (92%), Positives = 23/25 (92%)
 Frame = -1

Query: 75  LLLGWLAPWAVRLSQSGLSSRPMFP 1
           LLLGWLAP  VRLSQSGLSSRPMFP
Sbjct: 60  LLLGWLAPEVVRLSQSGLSSRPMFP 84


>ref|XP_002527161.1| cytochrome C oxidase, subunit II, putative [Ricinus communis]
           gi|223533482|gb|EEF35227.1| cytochrome C oxidase,
           subunit II, putative [Ricinus communis]
          Length = 139

 Score =  102 bits (253), Expect = 4e-20
 Identities = 48/59 (81%), Positives = 52/59 (88%)
 Frame = +1

Query: 4   KHRPTAEPTLAQPHRPGCEPPEKQAITASGWSSMEPRSKAVDKIEEGARLPVEQRRRLG 180
           KHRPTAE TLAQPH PGC+PP+KQ ITAS WS  EPRSKAVDKI+EGARL VEQRR+LG
Sbjct: 81  KHRPTAESTLAQPHHPGCDPPKKQDITASDWSCREPRSKAVDKIKEGARLLVEQRRQLG 139


>gb|ABV23661.1| cytochrome oxidase subunit 2 [Boehmeria nivea]
           gi|157102084|gb|ABV23662.1| cytochrome oxidase subunit 2
           [Boehmeria nivea] gi|157102086|gb|ABV23663.1| cytochrome
           oxidase subunit 2 [Boehmeria nivea]
          Length = 310

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/44 (86%), Positives = 40/44 (90%)
 Frame = +2

Query: 2   GNIGRLLSPLWLSRTAQGASHPRSKLLQRAAGAVWSRGARQ*IR 133
           GNIGR+ SPLWLSRT +GASHPRSKLLQRAAGAV SRGARQ IR
Sbjct: 267 GNIGRVPSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGARQWIR 310


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