BLASTX nr result
ID: Lithospermum22_contig00020753
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Lithospermum22_contig00020753 (229 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003601650.1| Small subunit processome component-like prot... 77 1e-12 ref|XP_004139015.1| PREDICTED: small subunit processome componen... 71 1e-10 ref|XP_003552811.1| PREDICTED: U3 small nucleolar RNA-associated... 68 7e-10 emb|CBI17281.3| unnamed protein product [Vitis vinifera] 68 7e-10 ref|XP_002264012.1| PREDICTED: U3 small nucleolar RNA-associated... 68 7e-10 >ref|XP_003601650.1| Small subunit processome component-like protein [Medicago truncatula] gi|355490698|gb|AES71901.1| Small subunit processome component-like protein [Medicago truncatula] Length = 2733 Score = 77.4 bits (189), Expect = 1e-12 Identities = 35/50 (70%), Positives = 44/50 (88%) Frame = +2 Query: 80 MATPSDSTAVKSLNNGPGRRRFLFKTFAQRIDDIEIDVFRSLHPVKAEPS 229 MATP+ + AVKSLN PGRRRF+FK+F+ R+DDI+I+V+RSLH VKAEPS Sbjct: 1 MATPAHAQAVKSLNKSPGRRRFVFKSFSDRVDDIDINVYRSLHKVKAEPS 50 >ref|XP_004139015.1| PREDICTED: small subunit processome component 20 homolog [Cucumis sativus] Length = 2696 Score = 70.9 bits (172), Expect = 1e-10 Identities = 33/50 (66%), Positives = 42/50 (84%) Frame = +2 Query: 80 MATPSDSTAVKSLNNGPGRRRFLFKTFAQRIDDIEIDVFRSLHPVKAEPS 229 MAT S + AVKSLN PGRRRF+F+TF+QR+ +I+IDV+RSL VK+EPS Sbjct: 1 MATASHAQAVKSLNKSPGRRRFVFQTFSQRVQEIDIDVYRSLDKVKSEPS 50 >ref|XP_003552811.1| PREDICTED: U3 small nucleolar RNA-associated protein 20-like [Glycine max] Length = 2653 Score = 68.2 bits (165), Expect = 7e-10 Identities = 32/50 (64%), Positives = 41/50 (82%) Frame = +2 Query: 80 MATPSDSTAVKSLNNGPGRRRFLFKTFAQRIDDIEIDVFRSLHPVKAEPS 229 MAT S + AVKSLN PG RRF+FK+F+ R+D+I+I+V+RSL VKAEPS Sbjct: 1 MATASQARAVKSLNKSPGGRRFVFKSFSDRVDEIDINVYRSLDKVKAEPS 50 >emb|CBI17281.3| unnamed protein product [Vitis vinifera] Length = 2629 Score = 68.2 bits (165), Expect = 7e-10 Identities = 32/50 (64%), Positives = 40/50 (80%) Frame = +2 Query: 80 MATPSDSTAVKSLNNGPGRRRFLFKTFAQRIDDIEIDVFRSLHPVKAEPS 229 MAT + AVKSLN GR+RF+FK F+QR+++IEIDVFRSL P+K EPS Sbjct: 1 MATSFHAQAVKSLNKSSGRKRFVFKNFSQRLEEIEIDVFRSLDPLKTEPS 50 >ref|XP_002264012.1| PREDICTED: U3 small nucleolar RNA-associated protein 20-like [Vitis vinifera] Length = 224 Score = 68.2 bits (165), Expect = 7e-10 Identities = 32/50 (64%), Positives = 40/50 (80%) Frame = +2 Query: 80 MATPSDSTAVKSLNNGPGRRRFLFKTFAQRIDDIEIDVFRSLHPVKAEPS 229 MAT + AVKSLN GR+RF+FK F+QR+++IEIDVFRSL P+K EPS Sbjct: 1 MATSFHAQAVKSLNKSSGRKRFVFKNFSQRLEEIEIDVFRSLDPLKTEPS 50