BLASTX nr result

ID: Lithospermum22_contig00020737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00020737
         (906 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_199139.1| nuclear factor Y, subunit C13 [Arabidopsis thal...   129   1e-27
ref|XP_002863677.1| hypothetical protein ARALYDRAFT_917343 [Arab...   126   8e-27
ref|XP_002297836.1| predicted protein [Populus trichocarpa] gi|2...   124   3e-26
ref|XP_002271716.1| PREDICTED: nuclear transcription factor Y su...   123   5e-26
ref|XP_002514923.1| DNA binding protein, putative [Ricinus commu...   122   1e-25

>ref|NP_199139.1| nuclear factor Y, subunit C13 [Arabidopsis thaliana]
           gi|10177387|dbj|BAB10588.1| unnamed protein product
           [Arabidopsis thaliana] gi|225879084|dbj|BAH30612.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332007548|gb|AED94931.1| nuclear factor Y, subunit
           C13 [Arabidopsis thaliana]
          Length = 130

 Score =  129 bits (323), Expect = 1e-27
 Identities = 64/113 (56%), Positives = 82/113 (72%)
 Frame = +3

Query: 159 PSLPISRIKRIMKLDKDINKVNSEAAFLITCSTELFLQFLAERSAQVVLERKKKTIKLDH 338
           P  PI R+K+IMKLDKDINK+NSEA  +IT STELFL FLAE+SA V  E+K+KT+ LDH
Sbjct: 10  PEFPIGRVKKIMKLDKDINKINSEALHVITYSTELFLHFLAEKSAVVTAEKKRKTVNLDH 69

Query: 339 FRVAVKQHQPTNDFLLDCLPNNSEVVPKESRGSGSKKDVGASGSKKIEAFFNK 497
            R+AVK+HQPT+DFLLD LP  ++ V      S  K      G+++I+ FF+K
Sbjct: 70  LRIAVKRHQPTSDFLLDSLPLPAQPVKHTKSVSDKKIPAPPIGTRRIDDFFSK 122


>ref|XP_002863677.1| hypothetical protein ARALYDRAFT_917343 [Arabidopsis lyrata subsp.
           lyrata] gi|297309512|gb|EFH39936.1| hypothetical protein
           ARALYDRAFT_917343 [Arabidopsis lyrata subsp. lyrata]
          Length = 131

 Score =  126 bits (316), Expect = 8e-27
 Identities = 64/121 (52%), Positives = 83/121 (68%)
 Frame = +3

Query: 135 ATTEEPHHPSLPISRIKRIMKLDKDINKVNSEAAFLITCSTELFLQFLAERSAQVVLERK 314
           A  E    P  P+ R+K+IMKLDK+INK+NSEA  +IT STELFL FLAE+SA V  E+K
Sbjct: 2   AEEETSTRPEFPLGRVKKIMKLDKEINKINSEALHVITYSTELFLHFLAEKSAIVTAEKK 61

Query: 315 KKTIKLDHFRVAVKQHQPTNDFLLDCLPNNSEVVPKESRGSGSKKDVGASGSKKIEAFFN 494
           +KT+ LDH R AVK+HQPT+DFLLD LP  ++ V      S  K      G+++I+ FF+
Sbjct: 62  RKTVNLDHLRTAVKRHQPTSDFLLDSLPLPAQPVKHTKSVSDKKAPPPPIGTRRIDDFFS 121

Query: 495 K 497
           K
Sbjct: 122 K 122


>ref|XP_002297836.1| predicted protein [Populus trichocarpa] gi|222845094|gb|EEE82641.1|
           predicted protein [Populus trichocarpa]
          Length = 123

 Score =  124 bits (311), Expect = 3e-26
 Identities = 62/117 (52%), Positives = 85/117 (72%), Gaps = 4/117 (3%)
 Frame = +3

Query: 159 PSLPISRIKRIMKLDKDINKVNSEAAFLITCSTELFLQFLAERSAQVVLERKKKTIKLDH 338
           P  P  RIKRIMKLDKD NKVN++A FL++ STELFL+FLAE+SA+V +E+K+K +KLDH
Sbjct: 7   PEFPTGRIKRIMKLDKDTNKVNADALFLVSSSTELFLRFLAEKSAEVAIEKKRKIVKLDH 66

Query: 339 FRVAVKQHQPTNDFLLDCLPNNSEVVPKESRGSGSKKDV----GASGSKKIEAFFNK 497
            R AVK+H PT+DFLLD LP  ++   K +  + S + V      +G+++I+ FF K
Sbjct: 67  IRAAVKRHHPTSDFLLDSLPLPAQSSEKPASDNTSARTVTDKPAPAGTRRIDQFFAK 123


>ref|XP_002271716.1| PREDICTED: nuclear transcription factor Y subunit gamma [Vitis
           vinifera]
          Length = 140

 Score =  123 bits (309), Expect = 5e-26
 Identities = 58/117 (49%), Positives = 88/117 (75%), Gaps = 4/117 (3%)
 Frame = +3

Query: 159 PSLPISRIKRIMKLDKDINKVNSEAAFLITCSTELFLQFLAERSAQVVLERKKKTIKLDH 338
           P LP+ R+K+++KLD+DINKVNSEA FLI+CSTELFL+FLAE+SA++ +++K++T+KL+H
Sbjct: 12  PELPLGRVKKLVKLDRDINKVNSEALFLISCSTELFLRFLAEQSAEIAIQKKRRTVKLEH 71

Query: 339 FRVAVKQHQPTNDFLLDCLPNNSEVVPK----ESRGSGSKKDVGASGSKKIEAFFNK 497
            R+A K+H+PT DFLLD LP  S+   +      R   + +    +G+++I+ FF K
Sbjct: 72  LRIAAKKHRPTRDFLLDSLPVPSQPSDRPPADRIRPQPAAEKPLPAGTRRIDDFFRK 128


>ref|XP_002514923.1| DNA binding protein, putative [Ricinus communis]
           gi|223545974|gb|EEF47477.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 141

 Score =  122 bits (306), Expect = 1e-25
 Identities = 63/123 (51%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
 Frame = +3

Query: 141 TEEPHHPSLPISRIKRIMKLDKDINKVNSEAAFLITCSTELFLQFLAERSAQVVLERKKK 320
           T E   P  P  R+K+IMKLDKDINKV S+A FL++ STELFL+ LAE+SA+V  E+K+K
Sbjct: 7   TVETIRPEFPTGRVKKIMKLDKDINKVTSDALFLVSRSTELFLRLLAEKSAEVATEQKRK 66

Query: 321 TIKLDHFRVAVKQHQPTNDFLLDCLPNNSE----VVPKESRGSGSKKDVGASGSKKIEAF 488
           TIKLDH R+AVK+HQPT+DFLLD LP+ +E    +  +++R           G+++I+  
Sbjct: 67  TIKLDHIRIAVKRHQPTSDFLLDSLPSPTESSDKLAAEKNRSRLIADKPAPPGTRRIDEI 126

Query: 489 FNK 497
           F K
Sbjct: 127 FAK 129


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