BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00020732
         (1342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-...   454   e-125
ref|XP_002512344.1| excision repair cross-complementing 1 ercc1,...   445   e-122
ref|XP_003535349.1| PREDICTED: DNA excision repair protein ERCC-...   435   e-119
ref|XP_002328427.1| predicted protein [Populus trichocarpa] gi|2...   433   e-119
ref|NP_187172.1| DNA excision repair protein ERCC-1 [Arabidopsis...   413   e-113

>ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-1-like [Vitis vinifera]
            gi|296088298|emb|CBI36743.3| unnamed protein product
            [Vitis vinifera]
          Length = 398

 Score =  454 bits (1169), Expect = e-125
 Identities = 237/383 (61%), Positives = 271/383 (70%), Gaps = 12/383 (3%)
 Frame = -2

Query: 1269 EMEKQGNESEKEKFVIKIPSYQEVIDNXXXXXXXXXXXSNIFTPSVSFSQAFTFIKNSDF 1090
            + E+   +  K   VIKIPSYQEV+++            ++FTPS SFSQAF+F+K+S  
Sbjct: 9    QRERDDEKKNKSSIVIKIPSYQEVLESSQSKTTS-----SLFTPSPSFSQAFSFVKSSQS 63

Query: 1089 YXXXXXXXXXP------RNTSQQHTPSPSKGQ------VPSKNAILVSHRQKGNPLLKHI 946
            Y         P      R   Q   PS S           S+NAILVSHRQKGNPLLKHI
Sbjct: 64   YTPPPPATPPPPPPPSSRQVEQLEAPSSSSSSPSLSRSAQSRNAILVSHRQKGNPLLKHI 123

Query: 945  RNARWDFADVVCDYQLGQNACALYLSLRYHLLHPDYLYFRIRELQKNYRLRVVLCHVDVE 766
            RN RWDFAD+VCDY LGQN+CALYLSLRYHLLHPDYLY+RIRELQKN++LRVVLCHVDVE
Sbjct: 124  RNVRWDFADIVCDYLLGQNSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVE 183

Query: 765  DVIKPLLEVTKTALLHDCTLLCGWSLEECGRYLETFKVYENKPADLIQGQMDTDYRSRLN 586
            DVIKPLLEVT+TALLHDCTLLC WSLEECGRYLET KVYENK AD+IQGQ DTDY SRL 
Sbjct: 184  DVIKPLLEVTRTALLHDCTLLCAWSLEECGRYLETIKVYENKSADIIQGQTDTDYLSRLT 243

Query: 585  HSLTSVRHVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRM 406
            H+LT+VRHVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVKRLYDTFHEPFKR+
Sbjct: 244  HALTTVRHVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRV 303

Query: 405  LXXXXXXXXXPSHGNAESSAXXXXXXXXXXXXXXXXXXXXEPELTIKSALTAALSKYSDR 226
            +         P H NAE S+                    EPELT+KSAL+AA ++YS++
Sbjct: 304  VPSCPAVPENPVHNNAEPSSVNEVVEVENDVEDASKRRKKEPELTVKSALSAAFAQYSEK 363

Query: 225  VSKERNKTQKDGTEDSAKEGDIK 157
            + K  N+ Q    E+     + K
Sbjct: 364  IGKRNNRPQGKKHEEKGHAPETK 386


>ref|XP_002512344.1| excision repair cross-complementing 1 ercc1, putative [Ricinus
            communis] gi|223548305|gb|EEF49796.1| excision repair
            cross-complementing 1 ercc1, putative [Ricinus communis]
          Length = 392

 Score =  445 bits (1144), Expect = e-122
 Identities = 231/372 (62%), Positives = 273/372 (73%), Gaps = 7/372 (1%)
 Frame = -2

Query: 1269 EMEKQGNESEKEKFVIKIPSYQEVIDNXXXXXXXXXXXSNIFTPSVSFSQAFTFIKNSDF 1090
            E E+   +S  +K VI+IPSYQEVI++            ++F PS +FSQAF+FIK+S+F
Sbjct: 9    EEERSNRKSNAKKVVIQIPSYQEVIESSQNPKTE-----SLFKPSQTFSQAFSFIKDSEF 63

Query: 1089 YXXXXXXXXXPRNTSQ----QHTPSPSKGQVPS---KNAILVSHRQKGNPLLKHIRNARW 931
            Y           N +     Q  PSPS+    +   +N+ILVSHRQKGNPLLKHIRN RW
Sbjct: 64   YTPPPQSSAVSNNANSIQTTQSVPSPSQSVALTGNYRNSILVSHRQKGNPLLKHIRNVRW 123

Query: 930  DFADVVCDYQLGQNACALYLSLRYHLLHPDYLYFRIRELQKNYRLRVVLCHVDVEDVIKP 751
             FADVVCDY LGQN C+LYLSLRYHLLHPDYLY+RIRELQKNY+LRVVLCHVDVEDV+KP
Sbjct: 124  AFADVVCDYLLGQNCCSLYLSLRYHLLHPDYLYYRIRELQKNYKLRVVLCHVDVEDVVKP 183

Query: 750  LLEVTKTALLHDCTLLCGWSLEECGRYLETFKVYENKPADLIQGQMDTDYRSRLNHSLTS 571
            LLEVTKTALLHDCTLLC WSLEECGRYLET K+YENKPADLIQGQMDTDY SRL H+LT+
Sbjct: 184  LLEVTKTALLHDCTLLCAWSLEECGRYLETIKMYENKPADLIQGQMDTDYLSRLTHALTT 243

Query: 570  VRHVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRMLXXXX 391
            +RHVNKTDVVTLGSTFGSLS+IMDASMEDLARCPGIGERKVKRLYDTFHEPFKR++    
Sbjct: 244  IRHVNKTDVVTLGSTFGSLSNIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRVV-SSH 302

Query: 390  XXXXXPSHGNAESSAXXXXXXXXXXXXXXXXXXXXEPELTIKSALTAALSKYSDRVSKER 211
                  S  ++E +                     EPELT+KSAL+AA SKY++   K  
Sbjct: 303  PAVPETSQKDSEPALVDEVTEVGKGEYDESKWRKKEPELTVKSALSAAFSKYANTFVKRT 362

Query: 210  NKTQKDGTEDSA 175
            +K++ +   +++
Sbjct: 363  DKSEGENAGETS 374


>ref|XP_003535349.1| PREDICTED: DNA excision repair protein ERCC-1-like [Glycine max]
          Length = 398

 Score =  435 bits (1119), Expect = e-119
 Identities = 235/394 (59%), Positives = 277/394 (70%), Gaps = 31/394 (7%)
 Frame = -2

Query: 1266 MEKQGNESEKEK------FVIKIPSYQEVIDNXXXXXXXXXXXSNIFTPSVSFSQAFTFI 1105
            MEKQ  E E++K       VI+IPSYQEV+++            ++F PS +FS+AF F+
Sbjct: 1    MEKQNEEEEEQKKKKKSSVVIRIPSYQEVVESSQAKSTPS----SLFVPSQTFSEAFAFV 56

Query: 1104 KNSDFYXXXXXXXXXPRNTSQQHTPSPS------KGQVPS---KNAILVSHRQ-----KG 967
            K+SDFY          ++ +   T +PS         +PS   +N+ILVSHRQ     KG
Sbjct: 57   KSSDFYSPPPKSRETGQSDAPSSTSTPSPATAAASSTIPSSQNRNSILVSHRQCIILQKG 116

Query: 966  NPLLKHIRNARWDFADVVCDYQLGQNACALYLSLRYHLLHPDYLYFRIRELQKNYRLRVV 787
            NPLLKHIRN RW FADVVCDY LGQ++CALYLSLRYHLLHPDYLY+RIRELQKN++LRVV
Sbjct: 117  NPLLKHIRNVRWAFADVVCDYMLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVV 176

Query: 786  LCHVDVEDVIKPLLEVTKTALLHDCTLLCGWSLEECGRYLETFKVYENKPADLIQGQMDT 607
            LCHVDVEDVIKPLLEVTKTA+LHDCTLLCGWSLEECGRYLET KVYENKPAD+IQGQMDT
Sbjct: 177  LCHVDVEDVIKPLLEVTKTAMLHDCTLLCGWSLEECGRYLETIKVYENKPADIIQGQMDT 236

Query: 606  DYRSRLNHSLTSVRHVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVKRLYDTF 427
            DY SRL HSLT+VRHVNKTDVVTLG+TFGSLS+IM ASMEDLARCPGIGERKVKRL+DTF
Sbjct: 237  DYLSRLTHSLTTVRHVNKTDVVTLGTTFGSLSNIMGASMEDLARCPGIGERKVKRLFDTF 296

Query: 426  HEPFKRM-----------LXXXXXXXXXPSHGNAESSAXXXXXXXXXXXXXXXXXXXXEP 280
            HEPFKR+           +              AESS+                    EP
Sbjct: 297  HEPFKRVESSRQAIPETSVQNKPASPESSIRNKAESSS--LIEDKQEDTEDVSKRRKKEP 354

Query: 279  ELTIKSALTAALSKYSDRVSKERNKTQKDGTEDS 178
            E+T+KSAL+AA +KYS RV K ++ +Q +  E+S
Sbjct: 355  EVTVKSALSAAFAKYSGRVGKRKSTSQVEEKEES 388


>ref|XP_002328427.1| predicted protein [Populus trichocarpa] gi|222838142|gb|EEE76507.1|
            predicted protein [Populus trichocarpa]
          Length = 382

 Score =  433 bits (1114), Expect = e-119
 Identities = 227/378 (60%), Positives = 277/378 (73%), Gaps = 4/378 (1%)
 Frame = -2

Query: 1269 EMEKQGNESEKEKFVIKIPSYQEVIDNXXXXXXXXXXXSNIFTPSVSFSQAFTFIKNSDF 1090
            E +   + ++ +K +I+IPSYQEVI++            ++F PS +FSQAF+FIKNS+F
Sbjct: 8    EEQNTNSSNQNKKVLIQIPSYQEVIESSQVKPTQTQES-SLFKPSQTFSQAFSFIKNSEF 66

Query: 1089 YXXXXXXXXXPRNTSQQHTPSPSKGQVP---SKNAILVSHRQKGNPLLKHIRNARWDFAD 919
            Y            +  +H PS +   V    S+NAILVSHRQKGNPLLKHIRN +W FAD
Sbjct: 67   YSPPPPPP-----SKSEHGPSMASSSVQNNQSRNAILVSHRQKGNPLLKHIRNVKWAFAD 121

Query: 918  VVCDYQLGQNACALYLSLRYHLLHPDYLYFRIRELQKNYRLRVVLCHVDVEDVIKPLLEV 739
            VVCDY LGQ++CALYLSLRYHLLHPDYLY+RIRELQKN +LRVVLCHVDVEDV+KPLLEV
Sbjct: 122  VVCDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNCKLRVVLCHVDVEDVVKPLLEV 181

Query: 738  TKTALLHDCTLLCGWSLEECGRYLETFKVYENKPADLIQGQMDTDYRSRLNHSLTSVRHV 559
            TKTALLHDCTLLC WSLEECGRYLET K+YENKPADLIQGQMDTDY SRL+H+LT+VR V
Sbjct: 182  TKTALLHDCTLLCAWSLEECGRYLETIKMYENKPADLIQGQMDTDYSSRLHHALTTVRRV 241

Query: 558  NKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRMLXXXXXXXX 379
            NKTDVVTLGSTFGSLS+IMDASMEDLARCPGIGERKVKRLYDTFHEPFKR++        
Sbjct: 242  NKTDVVTLGSTFGSLSNIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRVVSSHPVVPQ 301

Query: 378  XPSHGNAESSAXXXXXXXXXXXXXXXXXXXXEPELTIKSALTAALSK-YSDRVSKERNKT 202
             P   + E S+                    EPELT+KSAL++A +K  ++++  ++ + 
Sbjct: 302  TPVQKDTEPSSVDEVAEMEMEEANANKHRKKEPELTVKSALSSAFAKCATNKLGNKKFQR 361

Query: 201  QKDGTEDSAKEGDIK*KK 148
            +K G   +A + + + +K
Sbjct: 362  EKVGETSTAIDSEAETRK 379


>ref|NP_187172.1| DNA excision repair protein ERCC-1 [Arabidopsis thaliana]
            gi|55976606|sp|Q9MA98.1|ERCC1_ARATH RecName: Full=DNA
            excision repair protein ERCC-1; Short=AtERCC1;
            Short=AtRAD10; AltName: Full=Ultraviolet hypersensitive 7
            gi|6729031|gb|AAF27027.1|AC009177_17 putative nucleotide
            repair protein [Arabidopsis thaliana]
            gi|9800490|gb|AAF99316.1|AF276082_1 ERCC1 [Arabidopsis
            thaliana] gi|15215614|gb|AAK91352.1| AT3g05210/T12H1_18
            [Arabidopsis thaliana] gi|21435979|gb|AAM51569.1|
            AT3g05210/T12H1_18 [Arabidopsis thaliana]
            gi|21618171|gb|AAM67221.1| putative nucleotide repair
            protein [Arabidopsis thaliana]
            gi|332640684|gb|AEE74205.1| DNA excision repair protein
            ERCC-1 [Arabidopsis thaliana]
          Length = 410

 Score =  413 bits (1062), Expect = e-113
 Identities = 226/397 (56%), Positives = 264/397 (66%), Gaps = 31/397 (7%)
 Frame = -2

Query: 1266 MEKQGNESEKEKFVIKIPSYQEVIDNXXXXXXXXXXXSNIFTPSVSFSQAFTFIKNSDFY 1087
            + +Q     K + VI +PSYQEV+++            ++F PS SFSQAF F+K+SD Y
Sbjct: 14   LHQQIARKPKTQIVIGVPSYQEVLESSQTKSTPP----SLFKPSQSFSQAFAFVKSSDVY 69

Query: 1086 XXXXXXXXXP------------RNTSQQHTPSPSK--------GQVPS-----KNAILVS 982
                                   ++SQ H    +         G VPS     +NAILVS
Sbjct: 70   SPPPPSSAAASSSQPSGASQVPHSSSQTHQTDGASSSSTPVATGSVPSNTTQNRNAILVS 129

Query: 981  HRQKGNPLLKHIRNARWDFADVVCDYQLGQNACALYLSLRYHLLHPDYLYFRIRELQKNY 802
            HRQKGNPLLKHIRN +W F+D++ DY LGQN+CALYLSLRYHLLHPDYLYFRIRELQKN+
Sbjct: 130  HRQKGNPLLKHIRNVKWVFSDIIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIRELQKNF 189

Query: 801  RLRVVLCHVDVEDVIKPLLEVTKTALLHDCTLLCGWSLEECGRYLETFKVYENKPADLIQ 622
            +L VVLCHVDVED +KPLLEVTKTALLHDCTLLC WS+ EC RYLET KVYENKPADLIQ
Sbjct: 190  KLSVVLCHVDVEDTVKPLLEVTKTALLHDCTLLCAWSMTECARYLETIKVYENKPADLIQ 249

Query: 621  GQMDTDYRSRLNHSLTSVRHVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVKR 442
            GQMDTDY SRLNHSLTS+RHVNK+DVVTLGSTFGSL+HI+DASMEDLARCPGIGERKVKR
Sbjct: 250  GQMDTDYLSRLNHSLTSIRHVNKSDVVTLGSTFGSLAHIIDASMEDLARCPGIGERKVKR 309

Query: 441  LYDTFHEPFKRML-----XXXXXXXXXPSHGNAESSAXXXXXXXXXXXXXXXXXXXXEPE 277
            LYDTFHEPFKR                P   +  S                      EPE
Sbjct: 310  LYDTFHEPFKRATSSYPSVVEPPIPEAPVEKDVNSEEPVEEDEDFVEDSRKRKKKEPEPE 369

Query: 276  LTIKSALTAALSKYSDRVSKERNK-TQKDGTEDSAKE 169
             T+K+AL+A  ++YSDR+SK++ K  +KD T  S  E
Sbjct: 370  KTVKTALSAVFARYSDRLSKKKEKQKEKDTTTASDAE 406