BLASTX nr result

ID: Lithospermum22_contig00020713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00020713
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitoch...    91   1e-16
ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258...    88   9e-16
emb|CBI40768.3| unnamed protein product [Vitis vinifera]               88   9e-16
ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glyc...    88   1e-15
ref|XP_003603877.1| RNA-binding protein 24-B [Medicago truncatul...    88   1e-15

>ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Glycine
           max]
          Length = 293

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 45/78 (57%), Positives = 58/78 (74%)
 Frame = +1

Query: 349 SHHEVMVPGNGSRGSVWPIMSNYSPFSDRNLSKLFVGGLAWETKSESLHRYFEQFGEIEE 528
           ++  + VP +GS  S    + N SPF D   +K+FVGGLAWET+SE++ RYF+QFGEI E
Sbjct: 2   AYQAIQVPSSGSSSSSGFQLLN-SPFGDTTYTKVFVGGLAWETQSETMRRYFDQFGEILE 60

Query: 529 AVVIYDRTSGRSKGYGFV 582
           AVVI D+ +GRSKGYGFV
Sbjct: 61  AVVITDKNTGRSKGYGFV 78


>ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258188 [Vitis vinifera]
          Length = 346

 Score = 88.2 bits (217), Expect = 9e-16
 Identities = 45/71 (63%), Positives = 53/71 (74%)
 Frame = +1

Query: 370 PGNGSRGSVWPIMSNYSPFSDRNLSKLFVGGLAWETKSESLHRYFEQFGEIEEAVVIYDR 549
           P +GS  S      N SPF D   +K+FVGGLAWET+SE++ RYFEQFGEI EAVVI D+
Sbjct: 9   PSSGSSSSSGFQFLN-SPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDK 67

Query: 550 TSGRSKGYGFV 582
            +GRSKGYGFV
Sbjct: 68  NTGRSKGYGFV 78


>emb|CBI40768.3| unnamed protein product [Vitis vinifera]
          Length = 275

 Score = 88.2 bits (217), Expect = 9e-16
 Identities = 45/71 (63%), Positives = 53/71 (74%)
 Frame = +1

Query: 370 PGNGSRGSVWPIMSNYSPFSDRNLSKLFVGGLAWETKSESLHRYFEQFGEIEEAVVIYDR 549
           P +GS  S      N SPF D   +K+FVGGLAWET+SE++ RYFEQFGEI EAVVI D+
Sbjct: 9   PSSGSSSSSGFQFLN-SPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDK 67

Query: 550 TSGRSKGYGFV 582
            +GRSKGYGFV
Sbjct: 68  NTGRSKGYGFV 78


>ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glycine max]
          Length = 286

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 44/71 (61%), Positives = 54/71 (76%)
 Frame = +1

Query: 370 PGNGSRGSVWPIMSNYSPFSDRNLSKLFVGGLAWETKSESLHRYFEQFGEIEEAVVIYDR 549
           P +GS  S    + N SPF D   +K+FVGGLAWET+SE++ RYF+QFGEI EAVVI D+
Sbjct: 9   PSSGSSSSSGFQLLN-SPFGDTTYTKVFVGGLAWETQSETMRRYFDQFGEILEAVVITDK 67

Query: 550 TSGRSKGYGFV 582
            +GRSKGYGFV
Sbjct: 68  NTGRSKGYGFV 78


>ref|XP_003603877.1| RNA-binding protein 24-B [Medicago truncatula]
           gi|355492925|gb|AES74128.1| RNA-binding protein 24-B
           [Medicago truncatula]
          Length = 371

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 44/71 (61%), Positives = 54/71 (76%)
 Frame = +1

Query: 370 PGNGSRGSVWPIMSNYSPFSDRNLSKLFVGGLAWETKSESLHRYFEQFGEIEEAVVIYDR 549
           P +GS  S    + N SPF D   +K+FVGGLAWET+SE++ RYFEQFG+I EAVVI D+
Sbjct: 6   PSSGSSSSSGFQLLN-SPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGDILEAVVITDK 64

Query: 550 TSGRSKGYGFV 582
            +GRSKGYGFV
Sbjct: 65  NTGRSKGYGFV 75


Top