BLASTX nr result

ID: Lithospermum22_contig00020684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00020684
         (888 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II tra...   196   8e-48
ref|XP_003548527.1| PREDICTED: uncharacterized protein LOC100818...   194   2e-47
ref|XP_003528804.1| PREDICTED: uncharacterized protein LOC100814...   190   4e-46
ref|XP_002532456.1| RNA binding protein, putative [Ricinus commu...   190   4e-46
ref|XP_003637247.1| hypothetical protein MTR_078s1015 [Medicago ...   184   3e-44

>ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like [Cucumis sativus]
           gi|449502064|ref|XP_004161533.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 19a-like
           [Cucumis sativus]
          Length = 219

 Score =  196 bits (497), Expect = 8e-48
 Identities = 90/117 (76%), Positives = 106/117 (90%)
 Frame = +3

Query: 168 MDPDNLRFGRGPRELTGAVDLVSHYKLLPHHAFFCKRPLPLSISDTHYLHNVVGDTEIRK 347
           M+ ++ +FGRGPRELTGAVDL+SHYKLLPHH FFCK+ LPLSISDTHYLHNVVGDTEIRK
Sbjct: 1   MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRK 60

Query: 348 GEGMQLDQLIGDPSFGRETSARIQPFDMDVLLEAFQLRETSPVHLPTSEKGIPTVAG 518
           GEGMQL+QLI + S+ RET+ARIQPFD D+L+EAFQLRET PV LP++EKG+PT+ G
Sbjct: 61  GEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPG 117


>ref|XP_003548527.1| PREDICTED: uncharacterized protein LOC100818495 [Glycine max]
          Length = 222

 Score =  194 bits (493), Expect = 2e-47
 Identities = 91/117 (77%), Positives = 107/117 (91%)
 Frame = +3

Query: 168 MDPDNLRFGRGPRELTGAVDLVSHYKLLPHHAFFCKRPLPLSISDTHYLHNVVGDTEIRK 347
           MDP+  +FG GPRELTGAVDL+SH+KLLPH+ FFCKRPLP+SI+DTHYLHNVVGDTEIRK
Sbjct: 1   MDPEGKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRPLPVSIADTHYLHNVVGDTEIRK 60

Query: 348 GEGMQLDQLIGDPSFGRETSARIQPFDMDVLLEAFQLRETSPVHLPTSEKGIPTVAG 518
           G+GMQLDQLI + SF R+T+ARIQPFD+DVL EAFQLRET+P+ LP +EKGIPT+AG
Sbjct: 61  GDGMQLDQLIQNTSF-RDTNARIQPFDLDVLKEAFQLRETAPIDLPAAEKGIPTIAG 116


>ref|XP_003528804.1| PREDICTED: uncharacterized protein LOC100814559 [Glycine max]
          Length = 223

 Score =  190 bits (482), Expect = 4e-46
 Identities = 88/117 (75%), Positives = 105/117 (89%)
 Frame = +3

Query: 168 MDPDNLRFGRGPRELTGAVDLVSHYKLLPHHAFFCKRPLPLSISDTHYLHNVVGDTEIRK 347
           MDP+  +FG GPRELTGAVDL+SH+KLLPH+ FFCKR LP+SI+DTHYLHNVVGDTEIRK
Sbjct: 1   MDPEGKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRSLPVSIADTHYLHNVVGDTEIRK 60

Query: 348 GEGMQLDQLIGDPSFGRETSARIQPFDMDVLLEAFQLRETSPVHLPTSEKGIPTVAG 518
           G+GMQL+QLI + S  R+T+ARIQPFD+DVL EAFQLRET+P+ LP +EKGIPT+AG
Sbjct: 61  GDGMQLEQLIQNTSSFRDTNARIQPFDLDVLKEAFQLRETAPIDLPAAEKGIPTIAG 117


>ref|XP_002532456.1| RNA binding protein, putative [Ricinus communis]
           gi|223527846|gb|EEF29942.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 221

 Score =  190 bits (482), Expect = 4e-46
 Identities = 86/116 (74%), Positives = 105/116 (90%)
 Frame = +3

Query: 168 MDPDNLRFGRGPRELTGAVDLVSHYKLLPHHAFFCKRPLPLSISDTHYLHNVVGDTEIRK 347
           MDP++ +FG GPRELTGAVDL+SH+KL+PHH FFCKR LPLSISDTHYLHNVVGD+EIRK
Sbjct: 1   MDPESKKFGSGPRELTGAVDLISHFKLVPHHEFFCKRSLPLSISDTHYLHNVVGDSEIRK 60

Query: 348 GEGMQLDQLIGDPSFGRETSARIQPFDMDVLLEAFQLRETSPVHLPTSEKGIPTVA 515
           G+GMQLDQLI + S+ R+++ARIQPFD+DVL EAFQL+ET+P+ LP +EKG PT+A
Sbjct: 61  GDGMQLDQLIQNTSYSRDSNARIQPFDLDVLREAFQLKETTPIDLPPAEKGTPTIA 116


>ref|XP_003637247.1| hypothetical protein MTR_078s1015 [Medicago truncatula]
           gi|355503182|gb|AES84385.1| hypothetical protein
           MTR_078s1015 [Medicago truncatula]
          Length = 219

 Score =  184 bits (466), Expect = 3e-44
 Identities = 82/107 (76%), Positives = 100/107 (93%)
 Frame = +3

Query: 198 GPRELTGAVDLVSHYKLLPHHAFFCKRPLPLSISDTHYLHNVVGDTEIRKGEGMQLDQLI 377
           GPRELTGAVDL+SH+KL+PH+ FFCKRPLP+SI+DTHYLH+VVGDTE+RKG+GMQLD+LI
Sbjct: 17  GPRELTGAVDLISHFKLIPHYEFFCKRPLPVSIADTHYLHSVVGDTEVRKGDGMQLDELI 76

Query: 378 GDPSFGRETSARIQPFDMDVLLEAFQLRETSPVHLPTSEKGIPTVAG 518
            + SF RETSARIQPFD+D+L E+FQLRET+P+ LP +EKGIPT+AG
Sbjct: 77  QNTSFSRETSARIQPFDLDILKESFQLRETAPIDLPAAEKGIPTIAG 123


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