BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00020655
         (1181 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat...   235   2e-59
ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat...   228   2e-57
ref|XP_002511572.1| pentatricopeptide repeat-containing protein,...   225   1e-56
ref|XP_002316516.1| predicted protein [Populus trichocarpa] gi|2...   218   2e-54
ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago ...   204   3e-50

>ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g74580 [Vitis vinifera] gi|297733985|emb|CBI15232.3|
            unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  235 bits (599), Expect = 2e-59
 Identities = 110/167 (65%), Positives = 136/167 (81%)
 Frame = +1

Query: 1    RSVEKQYKFSHTAATYNIMIKAFSDNLKTEMTEDLFHEMSSNGCIPDEYSYQCLINMFCK 180
            + V++QYKFSHT ATYNIMI AF+  L   M E LF++M  NG  PD Y+Y+ +I+ FCK
Sbjct: 589  KRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCK 648

Query: 181  IGNAESGYRYLLEKVEKGFLPSLATFGRVINCLCTKDKLREAVDIIHIMVKKSIVPDVVN 360
             GN  SGY +LL K+EKG +PSL TFGRV+NCLC K ++ EAV IIH+MV K IVP+VVN
Sbjct: 649  TGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVVN 708

Query: 361  TIFKADKRDVAAPKIVVEDLLKKGHINYYAYELLHDGIRDKKLSRKR 501
            TIF+ADK++VAAPKIVVE+L+KKGHI Y+AYE+LHDGIRDKKLSRK+
Sbjct: 709  TIFEADKKEVAAPKIVVENLMKKGHITYFAYEILHDGIRDKKLSRKK 755



 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 36/103 (34%), Positives = 54/103 (52%)
 Frame = +1

Query: 49  NIMIKAFSDNLKTEMTEDLFHEMSSNGCIPDEYSYQCLINMFCKIGNAESGYRYLLEKVE 228
           N ++K  S          L +EMS NGC PD ++Y  +IN  CKIG        +++ + 
Sbjct: 394 NTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIA 453

Query: 229 KGFLPSLATFGRVINCLCTKDKLREAVDIIHIMVKKSIVPDVV 357
           KG LP + TF  +I+  C K KL  A++I+  M    + PDV+
Sbjct: 454 KGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVI 496



 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 33/112 (29%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
 Frame = +1

Query: 43  TYNIMIKAFSDNLKTEMTEDLFHEMSSNGCIPDEYSYQCLINMFCKIGNAESGYRYLLEK 222
           TYN +I     N K    E    +M + G  PD ++Y  +I+ +CK+G  ++  + L + 
Sbjct: 287 TYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDG 346

Query: 223 VEKGFLPSLATFGRVINCLCTKDKLREAVDIIHIMVKKSIVPDVV--NTIFK 372
             KGF+P  +T+  +IN LC    +  A+++ +  ++K + P++V  NT+ K
Sbjct: 347 AFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVK 398



 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 32/106 (30%), Positives = 54/106 (50%)
 Frame = +1

Query: 43  TYNIMIKAFSDNLKTEMTEDLFHEMSSNGCIPDEYSYQCLINMFCKIGNAESGYRYLLEK 222
           T+N +I  +   LK +   ++   M ++G  PD  +Y  ++N  CK G  E         
Sbjct: 462 TFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLM 521

Query: 223 VEKGFLPSLATFGRVINCLCTKDKLREAVDIIHIMVKKSIVPDVVN 360
           +EKG +P++ T+  +    C   K+ EA+++I  M  K + PDVVN
Sbjct: 522 MEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVN 567


>ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g74580-like [Glycine max]
          Length = 747

 Score =  228 bits (582), Expect = 2e-57
 Identities = 110/184 (59%), Positives = 139/184 (75%)
 Frame = +1

Query: 1    RSVEKQYKFSHTAATYNIMIKAFSDNLKTEMTEDLFHEMSSNGCIPDEYSYQCLINMFCK 180
            R +EKQY   HT ATYNI++ AFS+ L   M   LF  M ++GC PD Y+Y+ +I+ FCK
Sbjct: 564  RRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCK 623

Query: 181  IGNAESGYRYLLEKVEKGFLPSLATFGRVINCLCTKDKLREAVDIIHIMVKKSIVPDVVN 360
            +GN   GY++LLE +EK F+PSL TFGRV+NCLC KDK+ EAV IIH+M++K IVP+ VN
Sbjct: 624  MGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETVN 683

Query: 361  TIFKADKRDVAAPKIVVEDLLKKGHINYYAYELLHDGIRDKKLSRKRHSQQTVGRFHKYV 540
            TIF+ADK+ VAAPKI+VEDLLKKGHI YY YELL+DGIRDKK+ +KR    TV   H+  
Sbjct: 684  TIFEADKKVVAAPKILVEDLLKKGHIAYYTYELLYDGIRDKKILKKR--LPTVNSLHRGA 741

Query: 541  SKSS 552
            S S+
Sbjct: 742  SSSA 745



 Score = 74.7 bits (182), Expect = 4e-11
 Identities = 36/106 (33%), Positives = 56/106 (52%)
 Frame = +1

Query: 43  TYNIMIKAFSDNLKTEMTEDLFHEMSSNGCIPDEYSYQCLINMFCKIGNAESGYRYLLEK 222
           TYN +I  +   LK +   ++ + M S G  PD  +Y  L+N  CK G +E         
Sbjct: 437 TYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAM 496

Query: 223 VEKGFLPSLATFGRVINCLCTKDKLREAVDIIHIMVKKSIVPDVVN 360
            EKG  P++ T+  +++ LC   K+ EAVD++  M  K + PDVV+
Sbjct: 497 EEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVS 542



 Score = 64.3 bits (155), Expect = 6e-08
 Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
 Frame = +1

Query: 46  YNIMIKAFSDNLKTEMTEDLFHEMSSNGCIPDEYSYQCLINMFCKIGNAESGYRYLLEKV 225
           YN +IK  S          L +EM+ NGC+P+ ++Y  +IN  CK+G        + + +
Sbjct: 368 YNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAI 427

Query: 226 EKGFLPSLATFGRVINCLCTKDKLREAVDIIHIMVKKSIVPDVV------NTIFKADKRD 387
            KG  P + T+  +I+  C + KL  A ++++ M  + + PDV+      N + KA K +
Sbjct: 428 AKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSE 487


>ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223550687|gb|EEF52174.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 735

 Score =  225 bits (574), Expect = 1e-56
 Identities = 102/173 (58%), Positives = 135/173 (78%)
 Frame = +1

Query: 1    RSVEKQYKFSHTAATYNIMIKAFSDNLKTEMTEDLFHEMSSNGCIPDEYSYQCLINMFCK 180
            R +E+QY+  HT ATYNIMI AFS+ L  +M + LFHEM   GC PD Y+Y+ +I+ FCK
Sbjct: 562  RRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCK 621

Query: 181  IGNAESGYRYLLEKVEKGFLPSLATFGRVINCLCTKDKLREAVDIIHIMVKKSIVPDVVN 360
            +GN  SGY +LL+++E GF+PSL TFGRVINCLC + ++ EAV I+H+MV+  +VP+ V 
Sbjct: 622  VGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVV 681

Query: 361  TIFKADKRDVAAPKIVVEDLLKKGHINYYAYELLHDGIRDKKLSRKRHSQQTV 519
            TIF ADK+ VAAPKI+VEDLLKK HI YYAYELL+DGIR+KKL + + S++ +
Sbjct: 682  TIFDADKKAVAAPKIIVEDLLKKSHITYYAYELLYDGIRNKKLQKNKASKEVL 734



 Score = 67.0 bits (162), Expect = 9e-09
 Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
 Frame = +1

Query: 46  YNIMIKAFSDNLKTEMTEDLFHEMSSNGCIPDEYSYQCLINMFCKIGNAESGYRYLLEKV 225
           YN +IK  S          L ++MS  G  PD ++Y  +IN  CK+G        L   +
Sbjct: 366 YNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAI 425

Query: 226 EKGFLPSLATFGRVINCLCTKDKLREAVDIIHIMVKKSIVPDVV--NTIFKADKRDVAAP 399
            KG+LP + TF  +I+  C + K+  A+ I+  M    + PDV+  N+I     +  A P
Sbjct: 426 AKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCK-AAKP 484

Query: 400 KIVVED---LLKKGHI-NYYAYELLHDGI 474
           + V+E    +++KG + N   Y +L + +
Sbjct: 485 EDVMETFKMIMEKGCLPNIITYNILIESL 513



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 31/106 (29%), Positives = 54/106 (50%)
 Frame = +1

Query: 43  TYNIMIKAFSDNLKTEMTEDLFHEMSSNGCIPDEYSYQCLINMFCKIGNAESGYRYLLEK 222
           T+N +I  +   LK +    +   M S+G  PD  +Y  ++N  CK    E         
Sbjct: 435 TFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMI 494

Query: 223 VEKGFLPSLATFGRVINCLCTKDKLREAVDIIHIMVKKSIVPDVVN 360
           +EKG LP++ T+  +I  LC   K+ EA+D++  +  + ++PD V+
Sbjct: 495 MEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVS 540


>ref|XP_002316516.1| predicted protein [Populus trichocarpa] gi|222865556|gb|EEF02687.1|
            predicted protein [Populus trichocarpa]
          Length = 761

 Score =  218 bits (555), Expect = 2e-54
 Identities = 104/167 (62%), Positives = 130/167 (77%)
 Frame = +1

Query: 1    RSVEKQYKFSHTAATYNIMIKAFSDNLKTEMTEDLFHEMSSNGCIPDEYSYQCLINMFCK 180
            R + +QYK SHT ATYNIMI AF++ L   M E LF EM + GC PD Y+Y+ +I+ FC 
Sbjct: 590  RRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCI 649

Query: 181  IGNAESGYRYLLEKVEKGFLPSLATFGRVINCLCTKDKLREAVDIIHIMVKKSIVPDVVN 360
             GN +SGY++LLE +EKGF+PSL TFGRVINCLC + ++ EAVDIIH MV   IVP+VVN
Sbjct: 650  TGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVVN 709

Query: 361  TIFKADKRDVAAPKIVVEDLLKKGHINYYAYELLHDGIRDKKLSRKR 501
            +I +ADK+ VAAPKIVVEDLLK+  I YYAYELL+DGIRDKK  +++
Sbjct: 710  SISEADKKVVAAPKIVVEDLLKRSCITYYAYELLYDGIRDKKTQKQK 756



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 39/152 (25%), Positives = 74/152 (48%), Gaps = 5/152 (3%)
 Frame = +1

Query: 34  TAATYNIMIKAFSDNLKTEMTEDLFHEMSSNGCIPDEYSYQCLINMFCKIGNAESGYRYL 213
           T   YN++IK             + +EMS NGC  D ++Y  +IN  CK+G        +
Sbjct: 390 TVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLM 449

Query: 214 LEKVEKGFLPSLATFGRVINCLCTKDKLREAVDIIHIMVKKSIVPDVV--NTIFKADKRD 387
            + + KG++P + TF  +I+  C + K+   + I++ M    + PDV+  N++     + 
Sbjct: 450 NDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKA 509

Query: 388 VAAPKIV--VEDLLKKGHI-NYYAYELLHDGI 474
           V    ++   E +++KG + N   Y +L + +
Sbjct: 510 VKNEDLMETFETMVEKGCVPNKITYNILTESL 541



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 31/105 (29%), Positives = 55/105 (52%)
 Frame = +1

Query: 43  TYNIMIKAFSDNLKTEMTEDLFHEMSSNGCIPDEYSYQCLINMFCKIGNAESGYRYLLEK 222
           TYN +I     N      E   H++ + G  PD ++Y  LI+ +CK+G  ++  + L   
Sbjct: 288 TYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGA 347

Query: 223 VEKGFLPSLATFGRVINCLCTKDKLREAVDIIHIMVKKSIVPDVV 357
           + KGF+P   T+  +IN LC  D++  A+ + +  + K + P V+
Sbjct: 348 ICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVI 392



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 33/106 (31%), Positives = 54/106 (50%)
 Frame = +1

Query: 43  TYNIMIKAFSDNLKTEMTEDLFHEMSSNGCIPDEYSYQCLINMFCKIGNAESGYRYLLEK 222
           T+N +I  +   LK E T  + ++M S+G  PD  +Y  ++N   K    E         
Sbjct: 463 TFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETM 522

Query: 223 VEKGFLPSLATFGRVINCLCTKDKLREAVDIIHIMVKKSIVPDVVN 360
           VEKG +P+  T+  +   LC   K+ EA+D++  ++ K I PD V+
Sbjct: 523 VEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVS 568


>ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
            gi|355510123|gb|AES91265.1| hypothetical protein
            MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  204 bits (520), Expect = 3e-50
 Identities = 97/168 (57%), Positives = 121/168 (72%)
 Frame = +1

Query: 1    RSVEKQYKFSHTAATYNIMIKAFSDNLKTEMTEDLFHEMSSNGCIPDEYSYQCLINMFCK 180
            R +EKQY  SHT ATYNI+I AFS+ L  +M   LF EM  NGC PD Y+Y+ LI+ FCK
Sbjct: 669  RGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCK 728

Query: 181  IGNAESGYRYLLEKVEKGFLPSLATFGRVINCLCTKDKLREAVDIIHIMVKKSIVPDVVN 360
             GN   GY++LLE +EKGF+PSL TFGRV+NCLC + K++EAV IIH+MV+K IVPD VN
Sbjct: 729  TGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTVN 788

Query: 361  TIFKADKRDVAAPKIVVEDLLKKGHINYYAYELLHDGIRDKKLSRKRH 504
            TIF+AD               KKGHI Y+AYE L+DG+RDKK+ +K+H
Sbjct: 789  TIFEAD---------------KKGHITYHAYEFLYDGVRDKKILKKKH 821



 Score = 74.7 bits (182), Expect = 4e-11
 Identities = 36/106 (33%), Positives = 54/106 (50%)
 Frame = +1

Query: 43  TYNIMIKAFSDNLKTEMTEDLFHEMSSNGCIPDEYSYQCLINMFCKIGNAESGYRYLLEK 222
           TYN ++  +   LK +   +L + M S G  PD  +Y  L+N  CK   +E         
Sbjct: 542 TYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAM 601

Query: 223 VEKGFLPSLATFGRVINCLCTKDKLREAVDIIHIMVKKSIVPDVVN 360
            EKG  P++ T+  +I  LC   K+ EAVD++  M  K + PDVV+
Sbjct: 602 TEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVS 647



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 23/155 (14%)
 Frame = +1

Query: 46  YNIMIKAFSDNLKTEMTEDLFHEMSSNGCIPDEYSYQCLINMFCKIGNAESGYRYLLEKV 225
           YN +IK             L +EM+  GC PD ++Y  +IN  CK+G        + + +
Sbjct: 473 YNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAI 532

Query: 226 EKGFLPSLATFGRVINCLCTKDKLREAVDIIHIMVKKSIVPDVV--NT------------ 363
            KG +P + T+  +++  C + KL  A+++++ M  + + PDV+  NT            
Sbjct: 533 TKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSE 592

Query: 364 ----IFKADKRDVAAPKI-----VVEDLLKKGHIN 441
               IFKA      AP I     ++E L     +N
Sbjct: 593 EVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVN 627