BLASTX nr result

ID: Lithospermum22_contig00020617 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00020617
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containi...   248   4e-64
ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containi...   246   2e-63
ref|XP_002313416.1| predicted protein [Populus trichocarpa] gi|2...   244   5e-63
ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containi...   241   7e-62
ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containi...   238   3e-61

>ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  248 bits (633), Expect = 4e-64
 Identities = 116/150 (77%), Positives = 130/150 (86%)
 Frame = +1

Query: 1   KRVKQLLETKGLQKVSGCSWIEVKRKVYALTSVDEFNPQIELIHAFLLKLATEMKDIGYE 180
           K V +LLE +GLQK+ GCSWIEVKRKVY+  SVDE NPQIE IHA L+KL+ EMK  GY 
Sbjct: 509 KSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYV 568

Query: 181 PQTNIVLYDLDTQEKERILLGHSEKLAVAFGLINNSKGEAIRITKNLRLCEDCHSFTKLV 360
           PQTN+VLYDLD +EKERI+LGHSEKLAVAFGLIN +KGE IRI KNLRLCEDCH+ TK +
Sbjct: 569 PQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTAKGETIRIRKNLRLCEDCHAVTKFI 628

Query: 361 TKFTNREILVRDINRFHHFRDGVCSCGDYW 450
           +KF NREILVRD+NRFHHFRDGVCSCGDYW
Sbjct: 629 SKFANREILVRDVNRFHHFRDGVCSCGDYW 658


>ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  246 bits (627), Expect = 2e-63
 Identities = 115/150 (76%), Positives = 129/150 (86%)
 Frame = +1

Query: 1   KRVKQLLETKGLQKVSGCSWIEVKRKVYALTSVDEFNPQIELIHAFLLKLATEMKDIGYE 180
           K V +LLE +GLQK+ GCSWIEVKRKVY+  SVDE NPQIE IHA L+KL+ EMK  GY 
Sbjct: 509 KSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYV 568

Query: 181 PQTNIVLYDLDTQEKERILLGHSEKLAVAFGLINNSKGEAIRITKNLRLCEDCHSFTKLV 360
           PQTN+VLYDLD +EKERI+LGHSEKLAVAFGLIN  KGE IRI KNLRLCEDCH+ TK +
Sbjct: 569 PQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTVKGETIRIRKNLRLCEDCHAVTKFI 628

Query: 361 TKFTNREILVRDINRFHHFRDGVCSCGDYW 450
           +KF NREILVRD+NRFHHF+DGVCSCGDYW
Sbjct: 629 SKFANREILVRDVNRFHHFKDGVCSCGDYW 658


>ref|XP_002313416.1| predicted protein [Populus trichocarpa] gi|222849824|gb|EEE87371.1|
           predicted protein [Populus trichocarpa]
          Length = 650

 Score =  244 bits (624), Expect = 5e-63
 Identities = 113/150 (75%), Positives = 132/150 (88%)
 Frame = +1

Query: 1   KRVKQLLETKGLQKVSGCSWIEVKRKVYALTSVDEFNPQIELIHAFLLKLATEMKDIGYE 180
           KRVK+LLE +GLQKV G SWIEVKRK+Y+  SVDE NP++E +HA L+KL+ E+K+ GY 
Sbjct: 501 KRVKKLLEARGLQKVPGRSWIEVKRKIYSFVSVDEVNPRMEQLHALLVKLSMELKEEGYV 560

Query: 181 PQTNIVLYDLDTQEKERILLGHSEKLAVAFGLINNSKGEAIRITKNLRLCEDCHSFTKLV 360
           PQT +VLYDL   EKERI+LGHSEKLAVAFGLIN+SKGE IRITK+LRLCEDCHSFTK +
Sbjct: 561 PQTKVVLYDLKAAEKERIVLGHSEKLAVAFGLINSSKGEVIRITKSLRLCEDCHSFTKFI 620

Query: 361 TKFTNREILVRDINRFHHFRDGVCSCGDYW 450
           +KF N+EILVRD+NRFHHFRDGVCSCGDYW
Sbjct: 621 SKFANKEILVRDVNRFHHFRDGVCSCGDYW 650


>ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449474033|ref|XP_004154055.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449510921|ref|XP_004163811.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 649

 Score =  241 bits (614), Expect = 7e-62
 Identities = 111/150 (74%), Positives = 131/150 (87%)
 Frame = +1

Query: 1   KRVKQLLETKGLQKVSGCSWIEVKRKVYALTSVDEFNPQIELIHAFLLKLATEMKDIGYE 180
           KRVK+LL+++ LQKV G SWIEV+RK+Y+ TSVDEFNPQ E +HA L+ L+ EMK  GY 
Sbjct: 500 KRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYT 559

Query: 181 PQTNIVLYDLDTQEKERILLGHSEKLAVAFGLINNSKGEAIRITKNLRLCEDCHSFTKLV 360
           PQT +VLYDLD +EKERI+LGHSEKLAVAFGLIN SKG+ IRITKNLRLCEDCHS TK +
Sbjct: 560 PQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFI 619

Query: 361 TKFTNREILVRDINRFHHFRDGVCSCGDYW 450
           +KF +REI+VRD+NRFHHF+DGVCSCGDYW
Sbjct: 620 SKFADREIMVRDLNRFHHFKDGVCSCGDYW 649


>ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Vitis vinifera]
          Length = 658

 Score =  238 bits (608), Expect = 3e-61
 Identities = 112/150 (74%), Positives = 129/150 (86%)
 Frame = +1

Query: 1   KRVKQLLETKGLQKVSGCSWIEVKRKVYALTSVDEFNPQIELIHAFLLKLATEMKDIGYE 180
           KRVK LLE +GLQKV G S IE++RK+Y+  SVDEFNPQIE +HA LLKL+ EMK+ GY 
Sbjct: 509 KRVKMLLEARGLQKVPGRSCIEIRRKIYSFMSVDEFNPQIEQLHALLLKLSMEMKEKGYV 568

Query: 181 PQTNIVLYDLDTQEKERILLGHSEKLAVAFGLINNSKGEAIRITKNLRLCEDCHSFTKLV 360
           P T +VLYDLD +EKERI+LGHSEKLA+AFGLIN+ KGE IRITKNLRLCEDCHS TK +
Sbjct: 569 PDTKVVLYDLDPEEKERIVLGHSEKLALAFGLINSKKGETIRITKNLRLCEDCHSVTKFI 628

Query: 361 TKFTNREILVRDINRFHHFRDGVCSCGDYW 450
           +KF NREILVRD+NRFH F+DGVCSCGDYW
Sbjct: 629 SKFANREILVRDVNRFHLFQDGVCSCGDYW 658