BLASTX nr result

ID: Lithospermum22_contig00020587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00020587
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vit...   168   4e-40
emb|CAN59779.1| hypothetical protein VITISV_024654 [Vitis vinifera]   168   4e-40
gb|AAM63811.1| putative RING zinc finger protein [Arabidopsis th...   159   3e-37
ref|NP_177767.1| RING-H2 finger protein ATL8 [Arabidopsis thalia...   159   3e-37
ref|XP_002887637.1| hypothetical protein ARALYDRAFT_316562 [Arab...   158   5e-37

>ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vitis vinifera]
          Length = 184

 Score =  168 bits (426), Expect = 4e-40
 Identities = 93/173 (53%), Positives = 103/173 (59%), Gaps = 9/173 (5%)
 Frame = +1

Query: 28  PSRFLGGAXXXXXXXXXXXXXXXAVDSDFXXXXXXXXXXXXXXXXXXXXXRCAWLRRLSG 207
           PSRFLGG                AVDSDF                     RCAWLRR+SG
Sbjct: 4   PSRFLGGVNSSATASQESA----AVDSDFVVILAALLCALICVLGLVAVARCAWLRRISG 59

Query: 208 GATT-------TTANKGVKKKVLNSLPKETYRNDDV--LVECAICLMEFVEGDEMRLLPQ 360
            A         T ANKG+KKK+L SLPK TY  +    L +CAICL EFV GDE+R+LPQ
Sbjct: 60  AANLPGGSAPQTPANKGLKKKILRSLPKVTYAAETAGNLTDCAICLTEFVGGDEIRVLPQ 119

Query: 361 CGHGFHVQCIDTWLGSHSSCPSCRQVLVVARCHKCGKFPAAEVAAPTSSTGRE 519
           CGHGFHV CIDTWLGSH SCPSCRQ+LVVARC KCG  PA+     +SSTG E
Sbjct: 120 CGHGFHVGCIDTWLGSHCSCPSCRQILVVARCQKCGGVPAS-----SSSTGAE 167


>emb|CAN59779.1| hypothetical protein VITISV_024654 [Vitis vinifera]
          Length = 312

 Score =  168 bits (426), Expect = 4e-40
 Identities = 93/173 (53%), Positives = 103/173 (59%), Gaps = 9/173 (5%)
 Frame = +1

Query: 28  PSRFLGGAXXXXXXXXXXXXXXXAVDSDFXXXXXXXXXXXXXXXXXXXXXRCAWLRRLSG 207
           PSRFLGG                AVDSDF                     RCAWLRR+SG
Sbjct: 4   PSRFLGGVNSSATASQESA----AVDSDFVVILAALLCALICVLGLVAVARCAWLRRISG 59

Query: 208 GATT-------TTANKGVKKKVLNSLPKETYRNDDV--LVECAICLMEFVEGDEMRLLPQ 360
            A         T ANKG+KKK+L SLPK TY  +    L +CAICL EFV GDE+R+LPQ
Sbjct: 60  AANLPGGSAPQTPANKGLKKKILRSLPKVTYAAETAGNLTDCAICLTEFVGGDEIRVLPQ 119

Query: 361 CGHGFHVQCIDTWLGSHSSCPSCRQVLVVARCHKCGKFPAAEVAAPTSSTGRE 519
           CGHGFHV CIDTWLGSH SCPSCRQ+LVVARC KCG  PA+     +SSTG E
Sbjct: 120 CGHGFHVGCIDTWLGSHCSCPSCRQILVVARCQKCGGVPAS-----SSSTGAE 167


>gb|AAM63811.1| putative RING zinc finger protein [Arabidopsis thaliana]
          Length = 186

 Score =  159 bits (401), Expect = 3e-37
 Identities = 76/123 (61%), Positives = 86/123 (69%), Gaps = 12/123 (9%)
 Frame = +1

Query: 178 RCAWLRRLSGGATT--------TTANKGVKKKVLNSLPKETYRND----DVLVECAICLM 321
           RCAWLRR++    +          ANKG+KKKVL SLPK TY  D    + LVECAICL 
Sbjct: 50  RCAWLRRIASRNRSDQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLT 109

Query: 322 EFVEGDEMRLLPQCGHGFHVQCIDTWLGSHSSCPSCRQVLVVARCHKCGKFPAAEVAAPT 501
           EF  GDE+R+LPQCGHGFHV CIDTWLGSHSSCPSCRQ+LVV RCHKCG  P +  + P 
Sbjct: 110 EFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVVTRCHKCGGLPGSSSSGPE 169

Query: 502 SST 510
             T
Sbjct: 170 PDT 172


>ref|NP_177767.1| RING-H2 finger protein ATL8 [Arabidopsis thaliana]
           gi|68565205|sp|Q8LC69.2|ATL8_ARATH RecName: Full=RING-H2
           finger protein ATL8 gi|6554478|gb|AAF16660.1|AC012394_9
           putative RING zinc finger protein; 36546-35989
           [Arabidopsis thaliana]
           gi|12323975|gb|AAG51946.1|AC015450_7 putative RING zinc
           finger protein; 5217-5774 [Arabidopsis thaliana]
           gi|26452794|dbj|BAC43477.1| putative RING finger protein
           [Arabidopsis thaliana] gi|28973309|gb|AAO63979.1|
           putative RING zinc finger protein [Arabidopsis thaliana]
           gi|332197717|gb|AEE35838.1| RING-H2 finger protein ATL8
           [Arabidopsis thaliana]
          Length = 185

 Score =  159 bits (401), Expect = 3e-37
 Identities = 76/123 (61%), Positives = 86/123 (69%), Gaps = 12/123 (9%)
 Frame = +1

Query: 178 RCAWLRRLSGGATT--------TTANKGVKKKVLNSLPKETYRND----DVLVECAICLM 321
           RCAWLRR++    +          ANKG+KKKVL SLPK TY  D    + LVECAICL 
Sbjct: 50  RCAWLRRIASRNRSDQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLT 109

Query: 322 EFVEGDEMRLLPQCGHGFHVQCIDTWLGSHSSCPSCRQVLVVARCHKCGKFPAAEVAAPT 501
           EF  GDE+R+LPQCGHGFHV CIDTWLGSHSSCPSCRQ+LVV RCHKCG  P +  + P 
Sbjct: 110 EFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVVTRCHKCGGLPGSSSSGPE 169

Query: 502 SST 510
             T
Sbjct: 170 PDT 172


>ref|XP_002887637.1| hypothetical protein ARALYDRAFT_316562 [Arabidopsis lyrata subsp.
           lyrata] gi|297333478|gb|EFH63896.1| hypothetical protein
           ARALYDRAFT_316562 [Arabidopsis lyrata subsp. lyrata]
          Length = 186

 Score =  158 bits (399), Expect = 5e-37
 Identities = 76/123 (61%), Positives = 86/123 (69%), Gaps = 12/123 (9%)
 Frame = +1

Query: 178 RCAWLRRLSGGATT--------TTANKGVKKKVLNSLPKETYRND----DVLVECAICLM 321
           RCAWLRR++    +          ANKG+KKKVL SLPK TY  D    + LVECAICL 
Sbjct: 50  RCAWLRRIASRNRSDQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLT 109

Query: 322 EFVEGDEMRLLPQCGHGFHVQCIDTWLGSHSSCPSCRQVLVVARCHKCGKFPAAEVAAPT 501
           EF  GDE+R+LPQCGHGFHV CIDTWLGSHSSCPSCRQ+LVVARCHKCG  P +  +   
Sbjct: 110 EFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVVARCHKCGGLPGSSTSGSE 169

Query: 502 SST 510
             T
Sbjct: 170 PDT 172


Top