BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00020524
         (1015 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37517.3| unnamed protein product [Vitis vinifera]              315   1e-83
ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis ...   315   1e-83
ref|XP_002307047.1| predicted protein [Populus trichocarpa] gi|2...   304   3e-80
ref|NP_201197.1| DNA topoisomerase III [Arabidopsis thaliana] gi...   287   3e-75
ref|XP_002864876.1| hypothetical protein ARALYDRAFT_496584 [Arab...   280   4e-73

>emb|CBI37517.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  315 bits (807), Expect = 1e-83
 Identities = 155/282 (54%), Positives = 181/282 (64%), Gaps = 10/282 (3%)
 Frame = +2

Query: 2    QNNDMVLRKKPDGNFMVGCLGFPLCRSAFWLPGSLLEAVVTQTVCEICTPGPIFKIQFKF 181
            Q +DMVLR+KPDGNFMVGCLG+P CR+  WLPGS+ EA +T   C  CTPGP++KIQFKF
Sbjct: 313  QESDMVLRRKPDGNFMVGCLGYPQCRNVVWLPGSISEAAITTISCNHCTPGPVYKIQFKF 372

Query: 182  RRVEIPPNFDADHLGCIGGCDDTLRQLVEICGTGSRNIPTVSGRGQGHPSLSSSGNVHGS 361
            RR+EIPPN++ DHLGC+ GCD+ LRQL EICGTGSR    +S RG+G  S +SS N   S
Sbjct: 373  RRLEIPPNYNIDHLGCVCGCDEILRQLTEICGTGSR----ISARGRG--SNASSTNAQRS 426

Query: 362  ARRQEVCMHCSQAGHSSNLCPSLASRGRGGRPPEINQQNGEESIPCDSCGAPCSLRTANT 541
              RQ  C+HCSQ GHSSN CPS   R R  +    N  +GE SIPC+ CG PC LRTANT
Sbjct: 427  NTRQTACIHCSQTGHSSNDCPSRVPRSRNSQSHRTNMPSGESSIPCNVCGTPCILRTANT 486

Query: 542  DANRGRKFYSCRSQGCNFFVWEE---------XXXXXXXXXXXXXXXXXXXXXXXXXXXX 694
            + NRGRKFYSC+SQ CNFFVWE+                                     
Sbjct: 487  ENNRGRKFYSCQSQECNFFVWEDSLNSSSGGRSAQPATARSSASNPSRRGGRGRGDRGRG 546

Query: 695  XXXXXXXXXXTFVSATGEPISG-RCFACGDPSHFANACPSRG 817
                      TFVSATG+P+SG RCF CGDPSHFAN CP+RG
Sbjct: 547  RQSGARTSDTTFVSATGDPVSGRRCFVCGDPSHFANVCPNRG 588


>ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis vinifera]
          Length = 914

 Score =  315 bits (807), Expect = 1e-83
 Identities = 155/282 (54%), Positives = 181/282 (64%), Gaps = 10/282 (3%)
 Frame = +2

Query: 2    QNNDMVLRKKPDGNFMVGCLGFPLCRSAFWLPGSLLEAVVTQTVCEICTPGPIFKIQFKF 181
            Q +DMVLR+KPDGNFMVGCLG+P CR+  WLPGS+ EA +T   C  CTPGP++KIQFKF
Sbjct: 638  QESDMVLRRKPDGNFMVGCLGYPQCRNVVWLPGSISEAAITTISCNHCTPGPVYKIQFKF 697

Query: 182  RRVEIPPNFDADHLGCIGGCDDTLRQLVEICGTGSRNIPTVSGRGQGHPSLSSSGNVHGS 361
            RR+EIPPN++ DHLGC+ GCD+ LRQL EICGTGSR    +S RG+G  S +SS N   S
Sbjct: 698  RRLEIPPNYNIDHLGCVCGCDEILRQLTEICGTGSR----ISARGRG--SNASSTNAQRS 751

Query: 362  ARRQEVCMHCSQAGHSSNLCPSLASRGRGGRPPEINQQNGEESIPCDSCGAPCSLRTANT 541
              RQ  C+HCSQ GHSSN CPS   R R  +    N  +GE SIPC+ CG PC LRTANT
Sbjct: 752  NTRQTACIHCSQTGHSSNDCPSRVPRSRNSQSHRTNMPSGESSIPCNVCGTPCILRTANT 811

Query: 542  DANRGRKFYSCRSQGCNFFVWEE---------XXXXXXXXXXXXXXXXXXXXXXXXXXXX 694
            + NRGRKFYSC+SQ CNFFVWE+                                     
Sbjct: 812  ENNRGRKFYSCQSQECNFFVWEDSLNSSSGGRSAQPATARSSASNPSRRGGRGRGDRGRG 871

Query: 695  XXXXXXXXXXTFVSATGEPISG-RCFACGDPSHFANACPSRG 817
                      TFVSATG+P+SG RCF CGDPSHFAN CP+RG
Sbjct: 872  RQSGARTSDTTFVSATGDPVSGRRCFVCGDPSHFANVCPNRG 913


>ref|XP_002307047.1| predicted protein [Populus trichocarpa] gi|222856496|gb|EEE94043.1|
            predicted protein [Populus trichocarpa]
          Length = 910

 Score =  304 bits (778), Expect = 3e-80
 Identities = 155/277 (55%), Positives = 178/277 (64%), Gaps = 5/277 (1%)
 Frame = +2

Query: 2    QNNDMVLRKKPDGNFMVGCLGFPLCRSAFWLPGSLLEAVVTQTVCEICTPGPIFKIQFKF 181
            Q  +MVL+K  DGNFMVGC GFP CR+A WLPG +LEA +T  +C  CTPGP++ IQFKF
Sbjct: 639  QEANMVLKKNRDGNFMVGCSGFPQCRNAVWLPGPVLEATITNNICNSCTPGPVYLIQFKF 698

Query: 182  RRVEIPPNFDADHLGCIGGCDDTLRQLVEICGTGSRNIPTVSGRGQGHPSLSSSGNVHGS 361
            R++EIPP F+ +HLGCIGGCD+TLRQL+EICGTGSR    V G G G P+ + S N   S
Sbjct: 699  RQLEIPPGFNVNHLGCIGGCDETLRQLIEICGTGSR----VQG-GNGPPTTTPS-NPQRS 752

Query: 362  ARRQEVCMHCSQAGHSSNLCPSLASRGRGGRPPEINQQNGEESIPCDSCGAPCSLRTANT 541
              RQ  C++C Q GH+S  CPS  S  R  +   +NQQNGE SIPC +CG PC LRTANT
Sbjct: 753  NSRQAPCIYCYQTGHASTDCPSRISATRHVQSHGMNQQNGESSIPCSTCGTPCVLRTANT 812

Query: 542  DANRGRKFYSCRSQGCNFFVWEE----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 709
              NRGRKFYSC SQ CNFFVWE+                                     
Sbjct: 813  ANNRGRKFYSCSSQACNFFVWEDNLNNGSAPRSAPRPNMSNSASNPSRRGGRGRGVQNAG 872

Query: 710  XXXXXTFVSATGEPISG-RCFACGDPSHFANACPSRG 817
                 TFVSATGEPISG RCF CGDPSHFANACPSRG
Sbjct: 873  RAADVTFVSATGEPISGRRCFVCGDPSHFANACPSRG 909


>ref|NP_201197.1| DNA topoisomerase III [Arabidopsis thaliana]
            gi|8777305|dbj|BAA96895.1| DNA topoisomerase III
            [Arabidopsis thaliana] gi|169218912|gb|ACA50279.1|
            topoisomerase 3 alpha [Arabidopsis thaliana]
            gi|332010433|gb|AED97816.1| DNA topoisomerase III
            [Arabidopsis thaliana]
          Length = 926

 Score =  287 bits (734), Expect = 3e-75
 Identities = 137/277 (49%), Positives = 174/277 (62%), Gaps = 8/277 (2%)
 Frame = +2

Query: 8    NDMVLRKKPDGNFMVGCLGFPLCRSAFWLPGSLLEAVVTQTVCEICTPGPIFKIQFKFRR 187
            +DM LRK  DGNFMVGC+ +P CR+A WLPG  LEA VT  VC+ C PGP++KI FKFR+
Sbjct: 648  SDMALRKNRDGNFMVGCMNYPQCRNAVWLPGPTLEASVTTNVCQSCGPGPVYKILFKFRQ 707

Query: 188  VEIPPNFDADHLGCIGGCDDTLRQLVEICGTGSRNIPTVSGRGQGHPSLSSSGNVHGSAR 367
            + IPP FD +HLGC+GGCDD L+QL++ICGTGSR+      + +  P  + S N+ GS  
Sbjct: 708  IGIPPGFDVNHLGCVGGCDDILKQLIDICGTGSRS------QARRTPGTAPSNNIQGSNT 761

Query: 368  RQ-EVCMHCSQAGHSSNLCPSLASRGRGGRPPEINQQNGEESIPCDSCGAPCSLRTANTD 544
            RQ  VC+HC Q GH+S  CPS     R  RP   N +N E ++ C++CG+ C LRTANT+
Sbjct: 762  RQSNVCIHCQQRGHASTNCPSRVPASRNSRPTATNPRNDESTVSCNTCGSQCVLRTANTE 821

Query: 545  ANRGRKFYSCRSQGCNFFVWEE------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 706
            ANRGR+F+SC +QGC+FF WE+                                      
Sbjct: 822  ANRGRQFFSCPTQGCSFFAWEDSINNSSGNATTGSNSGGSGRRGSRGRGRGGRGGQSSGG 881

Query: 707  XXXXXXTFVSATGEPISG-RCFACGDPSHFANACPSR 814
                  +FVSATGEP+SG RCF+CGDPSHFANACP+R
Sbjct: 882  RRGSGTSFVSATGEPVSGIRCFSCGDPSHFANACPNR 918


>ref|XP_002864876.1| hypothetical protein ARALYDRAFT_496584 [Arabidopsis lyrata subsp.
            lyrata] gi|297310711|gb|EFH41135.1| hypothetical protein
            ARALYDRAFT_496584 [Arabidopsis lyrata subsp. lyrata]
          Length = 923

 Score =  280 bits (716), Expect = 4e-73
 Identities = 136/274 (49%), Positives = 171/274 (62%), Gaps = 5/274 (1%)
 Frame = +2

Query: 8    NDMVLRKKPDGNFMVGCLGFPLCRSAFWLPGSLLEAVVTQTVCEICTPGPIFKIQFKFRR 187
            +DM LRK  DGNFMVGC+ +P CR+A WLPG  LEA VT  VC+ C PGP++KI FKFR+
Sbjct: 648  SDMALRKNRDGNFMVGCMNYPQCRNAVWLPGPTLEASVTTDVCQTCGPGPVYKILFKFRQ 707

Query: 188  VEIPPNFDADHLGCIGGCDDTLRQLVEICGTGSRNIPTVSGRGQGHPSLSSSGNVHGSAR 367
            + IPP FD +HLGCIGGCDD L+QL++ICGTGSR+      + +  P    S N+ GS  
Sbjct: 708  IGIPPGFDVNHLGCIGGCDDILKQLIDICGTGSRS------QARRAPGTVPSNNIQGSNT 761

Query: 368  RQ-EVCMHCSQAGHSSNLCPSLASRGRGGRPPEINQQNGEESIPCDSCGAPCSLRTANTD 544
            RQ   C+HC Q GH+S  CPS A+  R  R    N +N E ++ C++CG  C LRTANT+
Sbjct: 762  RQGNFCIHCQQRGHASANCPSRATAFRNSRLTATNPRNDESTVSCNTCGTQCVLRTANTE 821

Query: 545  ANRGRKFYSCRSQGCNFFVWEE---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 715
            ANRGR+F+SC +QGC+FF WE+                                      
Sbjct: 822  ANRGRQFFSCPTQGCSFFAWEDSINNSSGNATTGSNSGGSGRRGRGRGGRGGQSGGGRRN 881

Query: 716  XXXTFVSATGEPISG-RCFACGDPSHFANACPSR 814
               +FVSATGEP+SG RCF+CGDPSHFAN CP+R
Sbjct: 882  SGTSFVSATGEPVSGIRCFSCGDPSHFANVCPNR 915