BLASTX nr result

ID: Lithospermum22_contig00020493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00020493
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553167.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    41   1e-11
ref|XP_003557638.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    40   5e-09
ref|XP_002443537.1| hypothetical protein SORBIDRAFT_08g021180 [S...    44   2e-08
ref|XP_004162573.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    43   4e-08
ref|XP_004149532.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    43   4e-08

>ref|XP_003553167.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Glycine
           max]
          Length = 643

 Score = 40.8 bits (94), Expect(3) = 1e-11
 Identities = 18/36 (50%), Positives = 26/36 (72%)
 Frame = -1

Query: 553 LLFLRRQWDADRLAYVIQKSFKSEAFHGNISQVHSE 446
           ++F + + DADRL+YV+ KS + EA HG+ISQ   E
Sbjct: 336 IVFTQTKRDADRLSYVMAKSLRCEALHGDISQTQRE 371



 Score = 39.7 bits (91), Expect(3) = 1e-11
 Identities = 18/22 (81%), Positives = 21/22 (95%)
 Frame = -2

Query: 414 NVLVATDVAAHGLDVPDVDLVI 349
           NVLVATDVA+ GLD+P+VDLVI
Sbjct: 383 NVLVATDVASRGLDIPNVDLVI 404



 Score = 33.9 bits (76), Expect(3) = 1e-11
 Identities = 22/41 (53%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -3

Query: 653 KLAEGISLLSIASDPRQKLRIFY-YISGPRKGSKVIVFTQT 534
           KLA+GISL SI SD   K  I    I+    G K IVFTQT
Sbjct: 301 KLADGISLYSIVSDSYTKAGILAPLITEHANGGKCIVFTQT 341


>ref|XP_003557638.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like
           [Brachypodium distachyon]
          Length = 604

 Score = 40.4 bits (93), Expect(3) = 5e-09
 Identities = 19/33 (57%), Positives = 24/33 (72%)
 Frame = -2

Query: 447 KDFSWFPGWLINVLVATDVAAHGLDVPDVDLVI 349
           +  S F     N+LVATDVAA GLD+P+VDLV+
Sbjct: 368 RTLSGFREGRFNILVATDVAARGLDIPNVDLVV 400



 Score = 33.1 bits (74), Expect(3) = 5e-09
 Identities = 14/36 (38%), Positives = 25/36 (69%)
 Frame = -1

Query: 553 LLFLRRQWDADRLAYVIQKSFKSEAFHGNISQVHSE 446
           ++F + + +ADRLAY + +S+  +A HG+I+Q   E
Sbjct: 332 IVFTQTKREADRLAYSMGRSYACQALHGDITQNQRE 367



 Score = 32.0 bits (71), Expect(3) = 5e-09
 Identities = 22/41 (53%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -3

Query: 653 KLAEGISLLSIASDPRQKLRIF-YYISGPRKGSKVIVFTQT 534
           KL EGISL SIAS+   K  I    I     G K IVFTQT
Sbjct: 297 KLPEGISLYSIASENYGKSSILGTLIKEHANGGKCIVFTQT 337


>ref|XP_002443537.1| hypothetical protein SORBIDRAFT_08g021180 [Sorghum bicolor]
           gi|241944230|gb|EES17375.1| hypothetical protein
           SORBIDRAFT_08g021180 [Sorghum bicolor]
          Length = 618

 Score = 43.9 bits (102), Expect(2) = 2e-08
 Identities = 38/87 (43%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
 Frame = -3

Query: 653 KLAEGISLLSIASDPRQKLRIF-YYISGPRKGSKVIVFTQTVGCR*ACICDSEEL---*I 486
           KLAEGISLLS++S+ RQK  +    I    KG K IVFTQT         D++ L     
Sbjct: 311 KLAEGISLLSVSSENRQKPAVLGELIKEHAKGGKCIVFTQTKR-------DADRLSHSMS 363

Query: 485 RGFPWQHL-----TSP*RRTLAGFRDG 420
           R F  + L      S   RTL GFRDG
Sbjct: 364 RSFQCEALHGDISQSQRERTLGGFRDG 390



 Score = 40.0 bits (92), Expect(2) = 2e-08
 Identities = 17/22 (77%), Positives = 21/22 (95%)
 Frame = -2

Query: 414 NVLVATDVAAHGLDVPDVDLVI 349
           N+L+ATDVAA GLD+P+VDLVI
Sbjct: 393 NILIATDVAARGLDIPNVDLVI 414


>ref|XP_004162573.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Cucumis
           sativus]
          Length = 611

 Score = 42.7 bits (99), Expect(2) = 4e-08
 Identities = 22/35 (62%), Positives = 25/35 (71%)
 Frame = -2

Query: 447 KDFSWFPGWLINVLVATDVAAHGLDVPDVDLVILF 343
           +  S F     NVLVATDVAA GLD+P+VDLVI F
Sbjct: 392 RTLSGFRDGRFNVLVATDVAARGLDIPNVDLVIHF 426



 Score = 40.4 bits (93), Expect(2) = 4e-08
 Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
 Frame = -1

Query: 574 DHGKDPR-LLFLRRQWDADRLAYVIQKSFKSEAFHGNISQVHSE 446
           +HGK  + ++F + + DADRLAY + ++ + EA HG+ISQ   E
Sbjct: 348 EHGKGGKCIIFTQTKRDADRLAYAMGRNLRCEALHGDISQSQRE 391


>ref|XP_004149532.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Cucumis
           sativus]
          Length = 593

 Score = 42.7 bits (99), Expect(2) = 4e-08
 Identities = 22/35 (62%), Positives = 25/35 (71%)
 Frame = -2

Query: 447 KDFSWFPGWLINVLVATDVAAHGLDVPDVDLVILF 343
           +  S F     NVLVATDVAA GLD+P+VDLVI F
Sbjct: 392 RTLSGFRDGRFNVLVATDVAARGLDIPNVDLVIHF 426



 Score = 40.4 bits (93), Expect(2) = 4e-08
 Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
 Frame = -1

Query: 574 DHGKDPR-LLFLRRQWDADRLAYVIQKSFKSEAFHGNISQVHSE 446
           +HGK  + ++F + + DADRLAY + ++ + EA HG+ISQ   E
Sbjct: 348 EHGKGGKCIIFTQTKRDADRLAYAMGRNLRCEALHGDISQSQRE 391


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