BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00020488
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ...    55   3e-07
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...    55   5e-07
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                56   3e-06
emb|CAB10226.1| reverse transcriptase like protein [Arabidopsis ...    56   3e-06
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...    56   4e-06

>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 489

 Score = 55.1 bits (131), Expect(2) = 3e-07
 Identities = 23/58 (39%), Positives = 40/58 (68%)
 Frame = -2

Query: 305 QGALTGDLVSSYLFILVLEFFNGLMMRASGDTNFGFHPKC*E*GITHLSFAEDMVFLA 132
           +G   G  +S YLF++ +   + L+ +A+G   FG+HP+C + G+THLSFA+D++ L+
Sbjct: 36  RGLRQGCSLSPYLFVVSMNVLSKLLDKATGQRRFGYHPRCKQMGLTHLSFADDLMVLS 93



 Score = 24.3 bits (51), Expect(2) = 3e-07
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -1

Query: 96  FSLFRSLTGLRLNCAKSQIFF-GSTHAS 16
           F  F   +GLR++  KS ++F G +H S
Sbjct: 107 FETFAKCSGLRISMEKSTVYFAGLSHTS 134


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score = 55.1 bits (131), Expect(2) = 5e-07
 Identities = 26/64 (40%), Positives = 41/64 (64%)
 Frame = -2

Query: 305 QGALTGDLVSSYLFILVLEFFNGLMMRASGDTNFGFHPKC*E*GITHLSFAEDMVFLASV 126
           +G   G  ++ YLF++V++  +  + RA+G   FG+HPKC   G+THLSFA+D++ L   
Sbjct: 172 RGLRQGCSLTPYLFVIVMDVLSKKLDRAAGLRKFGYHPKCKNLGLTHLSFADDIMVLTDG 231

Query: 125 DLGS 114
            L S
Sbjct: 232 KLRS 235



 Score = 23.5 bits (49), Expect(2) = 5e-07
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 96  FSLFRSLTGLRLNCAKSQIFFGSTHASV 13
           F  F   +GL+++ AK+ I+F     SV
Sbjct: 243 FDSFAKQSGLKISMAKTTIYFAGISKSV 270


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/58 (41%), Positives = 40/58 (68%)
 Frame = -2

Query: 305 QGALTGDLVSSYLFILVLEFFNGLMMRASGDTNFGFHPKC*E*GITHLSFAEDMVFLA 132
           +G   G  +S YLF++ ++  + ++ +A+G   FGFHPKC   G+THLSFA+D++ L+
Sbjct: 301 RGLRQGCSLSPYLFVICMDVLSKMLDKAAGVRKFGFHPKCQRLGLTHLSFADDLMVLS 358


>emb|CAB10226.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268153|emb|CAB78489.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 318

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/64 (42%), Positives = 41/64 (64%)
 Frame = -2

Query: 305 QGALTGDLVSSYLFILVLEFFNGLMMRASGDTNFGFHPKC*E*GITHLSFAEDMVFLASV 126
           +G   G  +S YLF++V++  +  + RA+G   FG+HPKC   G+THLSFA+D++ L   
Sbjct: 90  RGLRQGCSLSPYLFVIVMDVLSKKLDRAAGLRKFGYHPKCKNLGLTHLSFADDIMVLTDG 149

Query: 125 DLGS 114
            L S
Sbjct: 150 KLRS 153


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 24/57 (42%), Positives = 38/57 (66%)
 Frame = -2

Query: 305 QGALTGDLVSSYLFILVLEFFNGLMMRASGDTNFGFHPKC*E*GITHLSFAEDMVFL 135
           +G   G  +S YLF++ +E  + ++ +A+G   FGFHPKC   G+THL FA+D++ L
Sbjct: 59  RGIRQGCALSPYLFVISMEVLSKMLDQAAGGKRFGFHPKCKNLGLTHLCFADDLMIL 115