BLASTX nr result

ID: Lithospermum22_contig00020462 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00020462
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520655.1| nucleic acid binding protein, putative [Rici...    77   1e-12
ref|XP_002269036.2| PREDICTED: zinc finger protein MAGPIE [Vitis...    72   6e-11
emb|CBI32240.3| unnamed protein product [Vitis vinifera]               72   6e-11
ref|XP_003625891.1| Zinc finger protein [Medicago truncatula] gi...    70   2e-10
ref|XP_002320356.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10

>ref|XP_002520655.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223540040|gb|EEF41617.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 631

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 57/151 (37%), Positives = 74/151 (49%), Gaps = 32/151 (21%)
 Frame = +2

Query: 2   QKSQQEESQMFDPGNNPGSSMHDIGLYSGMLMG-------------NNGGHQNA------ 124
           QK QQE SQ FDP ++ G  M D+G+ S M MG             +N  HQ++      
Sbjct: 485 QKGQQEMSQFFDPTSSSG--MSDMGMLSTMFMGTDQNPGFMKNIEHSNNDHQDSGNTTSL 542

Query: 125 ----------MAKNPSNSVRVGAGSNSMTTLDLLGIGGSRSSN---QLHVQQQRMNFEEI 265
                      A  PS  V     S+ M T D +GIGGSR +N   Q   QQQRM    +
Sbjct: 543 IHGRAHSMERTASGPSRLVGHNGESSDMMTRDFMGIGGSRPANLHEQQQQQQQRMEMGAM 602

Query: 266 SRQRMQVMDPFQPQQSHGDPALEKQPSMWDV 358
           S+QRM +M  FQ Q S G+ A+EK   +W+V
Sbjct: 603 SQQRMPMMSHFQQQLSLGESAMEK--PIWEV 631


>ref|XP_002269036.2| PREDICTED: zinc finger protein MAGPIE [Vitis vinifera]
          Length = 570

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 48/137 (35%), Positives = 68/137 (49%), Gaps = 25/137 (18%)
 Frame = +2

Query: 2   QKSQQEESQMFDPGNNPGSSMHDIGLYSGMLMGNNGGHQNA------------------- 124
           QK   E + +F   +   S  +DIG++  + +G   G QN+                   
Sbjct: 431 QKGPPEITPLFQTVSGSASMNNDIGMFGNVFIG---GDQNSPFLKNMENEDSSSTSSLAQ 487

Query: 125 ----MAKNPSNSVRVGAGSNS--MTTLDLLGIGGSRSSNQLHVQQQRMNFEEISRQRMQV 286
               MA++ +   R G       +TTLDLLG+GGSR  N L  QQQR+  E +S+ RMQ 
Sbjct: 488 GRTVMARSATGPSRFGGNGEGKDVTTLDLLGVGGSRPVN-LQEQQQRLELEAMSQHRMQA 546

Query: 287 MDPFQPQQSHGDPALEK 337
           M  FQ Q SHG+PA+E+
Sbjct: 547 MTTFQQQLSHGEPAIEQ 563


>emb|CBI32240.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 48/137 (35%), Positives = 68/137 (49%), Gaps = 25/137 (18%)
 Frame = +2

Query: 2   QKSQQEESQMFDPGNNPGSSMHDIGLYSGMLMGNNGGHQNA------------------- 124
           QK   E + +F   +   S  +DIG++  + +G   G QN+                   
Sbjct: 268 QKGPPEITPLFQTVSGSASMNNDIGMFGNVFIG---GDQNSPFLKNMENEDSSSTSSLAQ 324

Query: 125 ----MAKNPSNSVRVGAGSNS--MTTLDLLGIGGSRSSNQLHVQQQRMNFEEISRQRMQV 286
               MA++ +   R G       +TTLDLLG+GGSR  N L  QQQR+  E +S+ RMQ 
Sbjct: 325 GRTVMARSATGPSRFGGNGEGKDVTTLDLLGVGGSRPVN-LQEQQQRLELEAMSQHRMQA 383

Query: 287 MDPFQPQQSHGDPALEK 337
           M  FQ Q SHG+PA+E+
Sbjct: 384 MTTFQQQLSHGEPAIEQ 400


>ref|XP_003625891.1| Zinc finger protein [Medicago truncatula]
           gi|355500906|gb|AES82109.1| Zinc finger protein
           [Medicago truncatula]
          Length = 521

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 48/119 (40%), Positives = 67/119 (56%)
 Frame = +2

Query: 2   QKSQQEESQMFDPGNNPGSSMHDIGLYSGMLMGNNGGHQNAMAKNPSNSVRVGAGSNSMT 181
           QK QQE S +FD   N  +  +DIG++S   +  N G +     N SN +    G++  T
Sbjct: 414 QKEQQEISLLFDNNTNVSTMNNDIGMFSHHGLMKNVGQE---VSNCSNLIH---GNDVAT 467

Query: 182 TLDLLGIGGSRSSNQLHVQQQRMNFEEISRQRMQVMDPFQPQQSHGDPALEKQPSMWDV 358
             D LGIGGS SS  LH  QQ+   E +S+QR+++M+ F     H D A+EK  S+WDV
Sbjct: 468 VHDFLGIGGSSSS--LHEPQQQ-RLEALSQQRLEIMNNFHHHLPHEDSAMEK--SIWDV 521


>ref|XP_002320356.1| predicted protein [Populus trichocarpa] gi|222861129|gb|EEE98671.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 28/147 (19%)
 Frame = +2

Query: 2   QKSQQEESQMFDPGNNPGSSMHDIGLYSGMLMGNNG--------------------GHQN 121
           Q+  QE SQ+ D      S+M+D+ +++G+ M N+                     G   
Sbjct: 140 QRGPQETSQILDTSGTVNSAMNDMEMFTGVFMSNDQNPGFIRNMEQEDSGGSSLIHGRNP 199

Query: 122 AMAKNPSNSVRVGAGS---NSMTTLDLLGIGGSRSSNQLHVQ----QQRMNFEEISRQ-R 277
            M +NP+   R    S     M T D +G+GG+R +N LH Q    QQR+  E +S+Q R
Sbjct: 200 LMERNPTGPSRFAGTSIEGGDMMTRDFMGVGGARPTN-LHDQRQQHQQRLEMEGMSQQQR 258

Query: 278 MQVMDPFQPQQSHGDPALEKQPSMWDV 358
           M +M+PF  Q S  + A+EK PS+WDV
Sbjct: 259 MPMMNPFPQQPSLRESAMEK-PSIWDV 284


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