BLASTX nr result
ID: Lithospermum22_contig00020384
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00020384
(2689 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002527847.1| U2 snrnp auxiliary factor, small subunit, pu... 291 e-139
emb|CBI29641.3| unnamed protein product [Vitis vinifera] 296 e-137
ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247... 292 e-135
ref|NP_172503.1| zinc finger CCCH domain-containing protein 5 [A... 263 e-121
ref|XP_002892559.1| hypothetical protein ARALYDRAFT_471143 [Arab... 258 e-120
>ref|XP_002527847.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus communis]
gi|223532771|gb|EEF34550.1| U2 snrnp auxiliary factor,
small subunit, putative [Ricinus communis]
Length = 857
Score = 291 bits (744), Expect(2) = e-139
Identities = 164/373 (43%), Positives = 209/373 (56%), Gaps = 17/373 (4%)
Frame = +1
Query: 886 KHTDXXXXXXXXXXXXDVHTEFLKFGEIINFKVCRNSSSHLRGNVYVHYKSLESSVFANQ 1065
+HTD DVHTEFLK+GEI+NFKVC+NSS HLRGNVYV YKSL+S+V A
Sbjct: 269 EHTDEEVERSYEEFYEDVHTEFLKYGEIVNFKVCKNSSFHLRGNVYVQYKSLDSAVLAYC 328
Query: 1066 SINGRYFAGKQVTCEFVNVTKWKVAICGEFMKSKLEACSRGSACNFIHCFRNPGGDYEWA 1245
SINGRYFAGKQV CEFVNVT+WKVAICGE+MKS+L+ CSRG+ACNFIHCFRNPGGDYEWA
Sbjct: 329 SINGRYFAGKQVNCEFVNVTRWKVAICGEYMKSRLQMCSRGTACNFIHCFRNPGGDYEWA 388
Query: 1246 DWDKPPPRYWIRKMAALFGYTDESSFERQAEDENMXXXXXXXXXXXXDLNRYHSRRSQSK 1425
DWDKPPPRYWI KM ALFGY+DES+ ++Q E + +R+HS RS+S+
Sbjct: 389 DWDKPPPRYWIEKMTALFGYSDESACDKQMEQDKFKQPRMSSKRIPAYTDRHHSSRSRSR 448
Query: 1426 EAESPNIRLRNHYEEQNAQDIHQXXXXXXXXXXXXNWRDFHYETYEGEETESMDHPPSNG 1605
+ I HY ++ + + + H E++ D+ SN
Sbjct: 449 D-----IYYSLHYSGKSDNEDDDEERTHRHWRSDDDRKQIH---IHDEKSYRKDYHLSNR 500
Query: 1606 KYHASESDKYCSDRDGD-------RNWHGEHTGR-RLRSPVGKSQSWYHNEDHTKSRHRG 1761
K H SD SD D + R+ HG T R + S V K + + + S H+
Sbjct: 501 KSHDMISDGGWSDGDSEADRERNKRHGHGHVTKRSKHHSEVTKHSTHWSSGKSKDSNHKA 560
Query: 1762 SLRKRSREEADDHKERKNSVKHTKERSKDVH---------YSGKRSSRHHYERSVSIDDR 1914
+ + S ++ +ER N H +RSK SGK +H E S D
Sbjct: 561 ASDEWSDGDSGADRERNNCHGHVAKRSKHQSEVTKHSTRWSSGKSKDSNHQENS----DE 616
Query: 1915 WDGGSRIHESEHA 1953
W G R + EH+
Sbjct: 617 WSDGGRNGQKEHS 629
Score = 233 bits (593), Expect(2) = e-139
Identities = 117/229 (51%), Positives = 150/229 (65%), Gaps = 4/229 (1%)
Frame = +3
Query: 129 IAEQLRLEELTMLNDPNEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKRKAI--E 302
+AE+ R EE L+DP EQ ++ + E
Sbjct: 41 VAEKEREEEEAKLDDPEEQKRLQEMEEEENQRIERERKEFEERERKFLEEIERKMKLLEE 100
Query: 303 EEEEQRRLAQVEEQKLKQNEQVEHEND--EEDDWEYVEEGPPEIIWKGNEIIXXXXXXXX 476
EEEE+ R +E+++ + QVE EN+ ++DDWEYVEEGP EIIW+GNEII
Sbjct: 101 EEEEKERQKVLEDEQDAKKFQVEKENEFNDDDDWEYVEEGPAEIIWQGNEIIVRKKKIPK 160
Query: 477 XXXDEQSTQEAPNRPTSNPLPPQSDAFSEYKSGSMVSARQLLDDVAQQVPNFGTEHDKAH 656
+Q ++ +RPTSNPLPPQS+AF+EY+ M SA ++L++VAQQ+PNFGTE DKAH
Sbjct: 161 KKSADQQSRNEDDRPTSNPLPPQSEAFAEYQKAPMPSAERMLENVAQQIPNFGTEQDKAH 220
Query: 657 CPFHLKTGACRFGSRCNRVHFYPDKSCTLLIRNMYSGPGLAWEQDEGLE 803
CPFHLKTGACRFG RC+RVHFYPDK+ TLL++NMY+GPGLAWEQDEGLE
Sbjct: 221 CPFHLKTGACRFGQRCSRVHFYPDKANTLLMKNMYNGPGLAWEQDEGLE 269
>emb|CBI29641.3| unnamed protein product [Vitis vinifera]
Length = 875
Score = 296 bits (757), Expect(2) = e-137
Identities = 165/400 (41%), Positives = 211/400 (52%), Gaps = 44/400 (11%)
Frame = +1
Query: 889 HTDXXXXXXXXXXXXDVHTEFLKFGEIINFKVCRNSSSHLRGNVYVHYKSLESSVFANQS 1068
+TD DV TEFLKFGEI+NFKVCRN S HLRGNVYVHYKSL+S+V A S
Sbjct: 279 YTDEEVERCYEEFYEDVQTEFLKFGEIVNFKVCRNGSFHLRGNVYVHYKSLDSAVLAYHS 338
Query: 1069 INGRYFAGKQVTCEFVNVTKWKVAICGEFMKSKLEACSRGSACNFIHCFRNPGGDYEWAD 1248
ING Y+AGKQVTCEFV VT+WKVAICGE+MKS+ + CS G+ACNFIHCFRNPGGDYEWAD
Sbjct: 339 INGLYYAGKQVTCEFVGVTRWKVAICGEYMKSRFKTCSHGTACNFIHCFRNPGGDYEWAD 398
Query: 1249 WDKPPPRYWIRKMAALFGYTDESSFERQAEDENMXXXXXXXXXXXXDLNRYHSRRSQSKE 1428
WDKPPPRYW++ M ALFG TDES ++++ + E+M D +RYHSRRS+S+E
Sbjct: 399 WDKPPPRYWVKNMVALFGLTDESGYDKEVKQESMGRRRSTSNAGTVDADRYHSRRSRSRE 458
Query: 1429 A-ESPNIRLRNHYEEQNAQDIHQXXXXXXXXXXXXNWRDFHYETYE-------------- 1563
+ S R ++E D H+ H E YE
Sbjct: 459 SGYSHGEYARRQFDE---NDAHKNVYYQRHTSDGRKRIKMHEERYEEEAHFGDNRYSRSR 515
Query: 1564 ------------------GEETESMDHP-----------PSNGKYHASESDKYCSDRDGD 1656
G +S+ H SN H +SD SDRDGD
Sbjct: 516 IHNVESDGDLEGDKSRKHGHTRKSLKHQKEAMAVMDDLGDSNNSIHEPDSDGGWSDRDGD 575
Query: 1657 RNWHGEHTGRRLRSPVGKSQSWYHNEDHTKSRHRGSLRKRSREEADDHKERKNSVKHTKE 1836
+ H +HT +RL++ +S+ + DH S++R D + H
Sbjct: 576 HDGHHDHTMKRLKN---RSKMSEFSNDHRNSKYR-----------TDATDSDGDSSHRNR 621
Query: 1837 RSKDVHYSGKRSSRHHYERSVSIDDRWDGGSRIHESEHAG 1956
+ H ++SSRH E S + DD D R H+++ G
Sbjct: 622 QGDRYHSHRRKSSRHWDEVSETADDDEDKRKRTHDTDPTG 661
Score = 223 bits (567), Expect(2) = e-137
Identities = 118/227 (51%), Positives = 146/227 (64%), Gaps = 3/227 (1%)
Frame = +3
Query: 132 AEQLRLEELTMLNDPNEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKRKAIEEEE 311
A +LR EE LNDP EQ A+RK +E E
Sbjct: 28 AVRLREEEEAKLNDPEEQERMRLMEQEEAERCERERRKFEESERMWLEAAAERKRRKEVE 87
Query: 312 EQRRLAQVEEQKLKQNEQVEHENDEEDDWEYVEEGPPEIIWKGNEIIXXXXXXXXXXXD- 488
E+ R +EE + K+ E+ E+E +E+DDWEY E GP EIIW+GNEII D
Sbjct: 88 EEERRKILEELEKKEVEK-ENELNEDDDWEYAE-GPAEIIWQGNEIIVKKKRVRIAKKDV 145
Query: 489 --EQSTQEAPNRPTSNPLPPQSDAFSEYKSGSMVSARQLLDDVAQQVPNFGTEHDKAHCP 662
+E RPTSNPLPPQS+AFS++ + S++S++QL DV++Q+PNFGTE DK HCP
Sbjct: 146 DQHSRKEEDTERPTSNPLPPQSEAFSDHNA-SIISSQQLFADVSEQIPNFGTEQDKDHCP 204
Query: 663 FHLKTGACRFGSRCNRVHFYPDKSCTLLIRNMYSGPGLAWEQDEGLE 803
FH+KTGACRFG RC+RVHFYPDKSCTLLI+NMY+GPGLAWEQDEGLE
Sbjct: 205 FHIKTGACRFGQRCSRVHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE 251
>ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247160 [Vitis vinifera]
Length = 887
Score = 292 bits (747), Expect(2) = e-135
Identities = 162/367 (44%), Positives = 204/367 (55%), Gaps = 9/367 (2%)
Frame = +1
Query: 886 KHTDXXXXXXXXXXXXDVHTEFLKFGEIINFKVCRNSSSHLRGNVYVHYKSLESSVFANQ 1065
++TD DV TEFLKFGEI+NFKVCRN S HLRGNVYVHYKSL+S+V A
Sbjct: 254 EYTDEEVERCYEEFYEDVQTEFLKFGEIVNFKVCRNGSFHLRGNVYVHYKSLDSAVLAYH 313
Query: 1066 SINGRYFAGKQVTCEFVNVTKWKVAICGEFMKSKLEACSRGSACNFIHCFRNPGGDYEWA 1245
SING Y+AGKQVTCEFV VT+WKVAICGE+MKS+ + CS G+ACNFIHCFRNPGGDYEWA
Sbjct: 314 SINGLYYAGKQVTCEFVGVTRWKVAICGEYMKSRFKTCSHGTACNFIHCFRNPGGDYEWA 373
Query: 1246 DWDKPPPRYWIRKMAALFGYTDESSFERQAEDENMXXXXXXXXXXXXDLNRYHSRRSQSK 1425
DWDKPPPRYW++ M ALFG TDES ++++ + E+M D +RYHSRRS+S+
Sbjct: 374 DWDKPPPRYWVKNMVALFGLTDESGYDKEVKQESMGRRRSTSNAGTVDADRYHSRRSRSR 433
Query: 1426 EA-ESPNIRLRNHYEEQNAQDIHQXXXXXXXXXXXXNWRDFHYETYEGEETESMDHPPSN 1602
E+ S R ++E D H+ H E YE EE D+ S
Sbjct: 434 ESGYSHGEYARRQFDE---NDAHKNVYYQRHTSDGRKRIKMHEERYE-EEAHFGDNRYSR 489
Query: 1603 GKYHASESD-KYCSDRDGDRNWHGEHTGRRLRSPVGKSQSWYHNEDHTKSRHRGSLRKRS 1779
+ H ESD D DR H +H + R R++
Sbjct: 490 SRIHNVESDGDLLRDGTRDRERHNDHRRKSSRQ-----------------------REKV 526
Query: 1780 REEADDHKERKNSVKHTK----ERSKD---VHYSGKRSSRHHYERSVSIDDRWDGGSRIH 1938
E DD+ ERKN ++ +R D H ++S +H E +DD D + IH
Sbjct: 527 LESPDDYGERKNKTYDSEGDWSDREGDKSRKHGHTRKSLKHQKEAMAVMDDLGDSNNSIH 586
Query: 1939 ESEHAGG 1959
E + GG
Sbjct: 587 EPDSDGG 593
Score = 218 bits (556), Expect(2) = e-135
Identities = 119/235 (50%), Positives = 148/235 (62%), Gaps = 11/235 (4%)
Frame = +3
Query: 132 AEQLRLEELTMLNDPNEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKRKAIEEEE 311
A +LR EE LNDP EQ A+RK +E E
Sbjct: 23 AVRLREEEEAKLNDPEEQERMRLMEQEEAERCERERRKFEESERMWLEAAAERKRRKEVE 82
Query: 312 EQRRLAQVEEQKLKQNEQVEHENDEEDDWEYVEEGPPEIIWKGNEIIXXXXXXXXXXXD- 488
E+ R +EE + K+ E+ E+E +E+DDWEY E GP EIIW+GNEII D
Sbjct: 83 EEERRKILEELEKKEVEK-ENELNEDDDWEYAE-GPAEIIWQGNEIIVKKKRVRIAKKDV 140
Query: 489 -EQSTQEA---------PNRPTSNPLPPQSDAFSEYKSGSMVSARQLLDDVAQQVPNFGT 638
+ S +E RPTSNPLPPQS+AFS++ + S++S++QL DV++Q+PNFGT
Sbjct: 141 DQHSRKEVLLRLFQLYDTERPTSNPLPPQSEAFSDHNA-SIISSQQLFADVSEQIPNFGT 199
Query: 639 EHDKAHCPFHLKTGACRFGSRCNRVHFYPDKSCTLLIRNMYSGPGLAWEQDEGLE 803
E DK HCPFH+KTGACRFG RC+RVHFYPDKSCTLLI+NMY+GPGLAWEQDEGLE
Sbjct: 200 EQDKDHCPFHIKTGACRFGQRCSRVHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE 254
>ref|NP_172503.1| zinc finger CCCH domain-containing protein 5 [Arabidopsis thaliana]
gi|229621703|sp|Q9SY74.2|C3H5_ARATH RecName: Full=Zinc
finger CCCH domain-containing protein 5; Short=AtC3H5
gi|332190444|gb|AEE28565.1| zinc finger CCCH
domain-containing protein 5 [Arabidopsis thaliana]
Length = 757
Score = 263 bits (671), Expect(2) = e-121
Identities = 151/366 (41%), Positives = 203/366 (55%), Gaps = 31/366 (8%)
Frame = +1
Query: 886 KHTDXXXXXXXXXXXXDVHTEFLKFGEIINFKVCRNSSSHLRGNVYVHYKSLESSVFANQ 1065
++TD DVHTEFLK+GE++NFKVCRN S HL+GNVYVHY+SLES++ A Q
Sbjct: 294 EYTDEEAELCYEEFYEDVHTEFLKYGELVNFKVCRNGSFHLKGNVYVHYRSLESAILAYQ 353
Query: 1066 SINGRYFAGKQVTCEFVNVTKWKVAICGEFMKSKLEACSRGSACNFIHCFRNPGGDYEWA 1245
SINGRYFAGKQV CEFVN+++WKVAICGE+MKS+L+ CSRGSACNFIHCFRNPGGDYEWA
Sbjct: 354 SINGRYFAGKQVNCEFVNISRWKVAICGEYMKSRLKTCSRGSACNFIHCFRNPGGDYEWA 413
Query: 1246 DWDKPPPRYWIRKMAALFGYTDESSFERQAEDENMXXXXXXXXXXXXDLNRYHSRRSQSK 1425
D D+PPPR+WI KM +LFGY+D E+ E E+ D +R SRRS+S+
Sbjct: 414 DHDRPPPRFWIHKMTSLFGYSD----EKHMEHESSGSLNDSISDLSTDSHRQPSRRSRSR 469
Query: 1426 E------AESPNIRLRNHYEE-----------QNAQDIHQXXXXXXXXXXXXNWRDFHYE 1554
+ +P+ R R ++ + ++A++ H R+ + E
Sbjct: 470 DHDHANVGSTPSYRSRKYHGDTQDSTREDKLRRHAENCHDGDDSPSRDGSLE--REMYKE 527
Query: 1555 TYEGEETESMD-----HPPSNGKYHASESDKYCSDRDGDRNWHGEH-TGRRLRSPVGKSQ 1716
++T D H P + +Y D D + +G TG + + G
Sbjct: 528 RRYAKDTLHRDSRWSEHSPGHRVGRKRIHGRYSDDDSADGDDYGRRGTGHKRKPRRGTDS 587
Query: 1717 SWYHNEDHTKSR--HRGSLRKRSREEADDHKE------RKNSVKHTKERSKDVHYSGKRS 1872
D+ K R HR S RK SRE + KE R ++V R + H + S
Sbjct: 588 GVQEQMDNEKDRKTHRSS-RKHSREGSSADKEEGHEHDRVHTVSDKSHRERSKHRHERSS 646
Query: 1873 SRHHYE 1890
SR+ +E
Sbjct: 647 SRYSHE 652
Score = 201 bits (512), Expect(2) = e-121
Identities = 107/190 (56%), Positives = 133/190 (70%), Gaps = 17/190 (8%)
Frame = +3
Query: 285 KRKAIEEEE-----EQRRLAQVEE-QKLKQNEQVEHENDEEDDWEYVEEGPPEIIWKGNE 446
KRK EEEE E+RR +EE +KL+ + E DE+ ++EY+EEGPPEII++GNE
Sbjct: 107 KRKKEEEEEAKREEEERRWKDLEELRKLEASGNDECGEDEDGEYEYIEEGPPEIIFQGNE 166
Query: 447 IIXXXXXXXXXXXD-------EQSTQE----APNRPTSNPLPPQSDAFSEYKSGSMVSAR 593
II E S E +RPTSNPLPP S+A + Y++ S SA+
Sbjct: 167 IILKKNKVRVPKKSVVQVDGHESSNAEFVLQISDRPTSNPLPPGSEASANYQNVS--SAQ 224
Query: 594 QLLDDVAQQVPNFGTEHDKAHCPFHLKTGACRFGSRCNRVHFYPDKSCTLLIRNMYSGPG 773
Q+L+ VAQ+VPNFGTE DKAHCPFHLKTGACRFG RC+RVHFYP+KSCTLL++NMY+GPG
Sbjct: 225 QILESVAQEVPNFGTEQDKAHCPFHLKTGACRFGQRCSRVHFYPNKSCTLLMKNMYNGPG 284
Query: 774 LAWEQDEGLE 803
+ WEQDEGLE
Sbjct: 285 ITWEQDEGLE 294
>ref|XP_002892559.1| hypothetical protein ARALYDRAFT_471143 [Arabidopsis lyrata subsp.
lyrata] gi|297338401|gb|EFH68818.1| hypothetical protein
ARALYDRAFT_471143 [Arabidopsis lyrata subsp. lyrata]
Length = 772
Score = 258 bits (659), Expect(2) = e-120
Identities = 156/384 (40%), Positives = 205/384 (53%), Gaps = 29/384 (7%)
Frame = +1
Query: 886 KHTDXXXXXXXXXXXXDVHTEFLKFGEIINFKVCRNSSSHLRGNVYVHYKSLESSVFANQ 1065
++TD DVHTEFLK+GE+INFKVCRN S HL+GNVYVHY+SLES++ A Q
Sbjct: 294 EYTDEEAEHCYEEFYEDVHTEFLKYGELINFKVCRNGSFHLKGNVYVHYRSLESAILAYQ 353
Query: 1066 SINGRYFAGKQVTCEFVNVTKWKVAICGEFMKSKLEACSRGSACNFIHCFRNPGGDYEWA 1245
SINGRYFAGKQV CEFVN+++WKVAICGE+MKS+L+ CSRGSACNFIHCFRNPGGDYEWA
Sbjct: 354 SINGRYFAGKQVNCEFVNISRWKVAICGEYMKSRLKTCSRGSACNFIHCFRNPGGDYEWA 413
Query: 1246 DWDKPPPRYWIRKMAALFGYTDESSFERQAEDENMXXXXXXXXXXXXDLNRYHSRRSQSK 1425
D D+PPPR+WI KM +LFGY+D E+ E E+ D +R SRRS+S+
Sbjct: 414 DHDRPPPRFWIHKMTSLFGYSD----EKYMEHESSGSLNNSRSDLSTDSHRQPSRRSRSR 469
Query: 1426 E------AESPNIRLRNHYEE-----------QNAQDIHQXXXXXXXXXXXXNWRDFHYE 1554
+P+ R R ++ + ++A++ H R+ + E
Sbjct: 470 NHDHASVGSTPSYRSRKYHGDTWDSTREDELSRHAENCHDGDDSPSRDCSLE--REMYKE 527
Query: 1555 TYEGEETESMD-----HPPSN----GKYHASESDKYCSDRDGDRNWHGEHTGRRLRSPVG 1707
++T D H P + + H S+ D RD TG + +S G
Sbjct: 528 RRYAKDTLHRDSRWCEHSPGHRVIRKRIHGSDDDSPDGRRD---------TGHKQKSRRG 578
Query: 1708 KSQSWYHNEDHTKSR--HRGSLR-KRSREEADDHKERKNSVKHTKERSKDVHYSGKRSSR 1878
D K R HR S + R R AD + ++ HT S + S+
Sbjct: 579 TDSEVQEQTDDEKDRKTHRSSRKYSRERSSADQEEGHEHDRVHTVSDK-----SQRERSK 633
Query: 1879 HHYERSVSIDDRWDGGSRIHESEH 1950
H +ERS S R+ ES H
Sbjct: 634 HGHERSSS---RYSHAEDSTESRH 654
Score = 201 bits (512), Expect(2) = e-120
Identities = 107/190 (56%), Positives = 135/190 (71%), Gaps = 17/190 (8%)
Frame = +3
Query: 285 KRKAIEEEE-----EQRRLAQVEE-QKLKQNEQVEHENDEEDDWEYVEEGPPEIIWKGNE 446
KRK EEEE E+RR +EE +KL+ + E DE+ ++EY+EEGPPEII++GNE
Sbjct: 107 KRKKEEEEEAKREEEERRWKDLEELRKLEASGHDECGEDEDGEYEYIEEGPPEIIFQGNE 166
Query: 447 IIXXXXXXXXXXX-------DEQSTQE----APNRPTSNPLPPQSDAFSEYKSGSMVSAR 593
II +E S E +RPTSNPLPP S+A + Y++ S SA+
Sbjct: 167 IILKKNKVRVPKKSVVQVDGNESSNVEFVLQISDRPTSNPLPPGSEACANYQNVS--SAQ 224
Query: 594 QLLDDVAQQVPNFGTEHDKAHCPFHLKTGACRFGSRCNRVHFYPDKSCTLLIRNMYSGPG 773
Q+L+ V+Q+VPNFGTE DKAHCPFHLKTGACRFG RC+RVHFYP+KSCTLL++NMY+GPG
Sbjct: 225 QILESVSQEVPNFGTEQDKAHCPFHLKTGACRFGPRCSRVHFYPNKSCTLLMKNMYNGPG 284
Query: 774 LAWEQDEGLE 803
+AWEQDEGLE
Sbjct: 285 IAWEQDEGLE 294