BLASTX nr result

ID: Lithospermum22_contig00020345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00020345
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281678.2| PREDICTED: uncharacterized protein LOC100245...   160   1e-37
emb|CBI28137.3| unnamed protein product [Vitis vinifera]              158   5e-37
emb|CAN83717.1| hypothetical protein VITISV_017075 [Vitis vinifera]   158   5e-37
ref|XP_002324399.1| predicted protein [Populus trichocarpa] gi|2...   140   2e-31
gb|AAM62695.1| glycine-rich RNA-binding protein-like [Arabidopsi...   139   3e-31

>ref|XP_002281678.2| PREDICTED: uncharacterized protein LOC100245744 [Vitis vinifera]
          Length = 399

 Score =  160 bits (406), Expect = 1e-37
 Identities = 81/134 (60%), Positives = 99/134 (73%)
 Frame = -1

Query: 406 GGEGVKMTVDDNRSIYVGGLSYNVTEQTLRRAFNSYGPIIAVKIINDQAVGGKCYGFVTF 227
           G  G +MT+DD+ SIYVGGL YN TE ++R+ FN YG I+AVKIIN++ VGGKCYGFVTF
Sbjct: 47  GFAGGEMTIDDDNSIYVGGLPYNATEDSIRKVFNLYGAIVAVKIINERGVGGKCYGFVTF 106

Query: 226 KNPRSAMHAIDAMDGRNIEGRVVRVNEVKTRAGRSNFGQNEMKTRGGRSNFGRESFRQSY 47
            NPRSA+ AI+ M+GR+I+GR+V VNEV+TR              GGRSNFGRESFR++ 
Sbjct: 107 TNPRSAIDAINDMNGRDIDGRIVVVNEVRTR--------------GGRSNFGRESFRRNS 152

Query: 46  ERGAGGDRSRSRER 5
           ERG   DR R RER
Sbjct: 153 ERGMDWDRGRDRER 166


>emb|CBI28137.3| unnamed protein product [Vitis vinifera]
          Length = 347

 Score =  158 bits (400), Expect = 5e-37
 Identities = 79/128 (61%), Positives = 96/128 (75%)
 Frame = -1

Query: 388 MTVDDNRSIYVGGLSYNVTEQTLRRAFNSYGPIIAVKIINDQAVGGKCYGFVTFKNPRSA 209
           MT+DD+ SIYVGGL YN TE ++R+ FN YG I+AVKIIN++ VGGKCYGFVTF NPRSA
Sbjct: 1   MTIDDDNSIYVGGLPYNATEDSIRKVFNLYGAIVAVKIINERGVGGKCYGFVTFTNPRSA 60

Query: 208 MHAIDAMDGRNIEGRVVRVNEVKTRAGRSNFGQNEMKTRGGRSNFGRESFRQSYERGAGG 29
           + AI+ M+GR+I+GR+V VNEV+TR              GGRSNFGRESFR++ ERG   
Sbjct: 61  IDAINDMNGRDIDGRIVVVNEVRTR--------------GGRSNFGRESFRRNSERGMDW 106

Query: 28  DRSRSRER 5
           DR R RER
Sbjct: 107 DRGRDRER 114


>emb|CAN83717.1| hypothetical protein VITISV_017075 [Vitis vinifera]
          Length = 216

 Score =  158 bits (400), Expect = 5e-37
 Identities = 79/128 (61%), Positives = 96/128 (75%)
 Frame = -1

Query: 388 MTVDDNRSIYVGGLSYNVTEQTLRRAFNSYGPIIAVKIINDQAVGGKCYGFVTFKNPRSA 209
           MT+DD+ SIYVGGL YN TE ++R+ FN YG I+AVKIIN++ VGGKCYGFVTF NPRSA
Sbjct: 1   MTIDDDNSIYVGGLPYNATEDSIRKVFNLYGAIVAVKIINERGVGGKCYGFVTFTNPRSA 60

Query: 208 MHAIDAMDGRNIEGRVVRVNEVKTRAGRSNFGQNEMKTRGGRSNFGRESFRQSYERGAGG 29
           + AI+ M+GR+I+GR+V VNEV+TR              GGRSNFGRESFR++ ERG   
Sbjct: 61  IDAINDMNGRDIDGRIVVVNEVRTR--------------GGRSNFGRESFRRNSERGMDW 106

Query: 28  DRSRSRER 5
           DR R RER
Sbjct: 107 DRGRDRER 114


>ref|XP_002324399.1| predicted protein [Populus trichocarpa] gi|222865833|gb|EEF02964.1|
           predicted protein [Populus trichocarpa]
          Length = 353

 Score =  140 bits (352), Expect = 2e-31
 Identities = 69/130 (53%), Positives = 90/130 (69%), Gaps = 2/130 (1%)
 Frame = -1

Query: 388 MTVDDNRSIYVGGLSYNVTEQTLRRAFNSYGPIIAVKIINDQAVGGKCYGFVTFKNPRSA 209
           MT+DD+RSIY+GGL YN +E TLRR FN YG I+AVKIIN+    GKCYGFVTF+NPRS 
Sbjct: 1   MTIDDDRSIYIGGLPYNASEDTLRRVFNLYGSIVAVKIINNHGTSGKCYGFVTFRNPRSV 60

Query: 208 MHAIDAMDGRNIEGRVVRVNEVKTRAGRSNFGQNEMKT--RGGRSNFGRESFRQSYERGA 35
           + AI+ M+G+ I+GRVVRVN V +R+G+SNF   ++++    GR       +     R  
Sbjct: 61  IDAINDMNGKTIDGRVVRVNGVTSRSGKSNFTGEDIRSHVERGRERGRERDYDHDRHRQW 120

Query: 34  GGDRSRSRER 5
             DRSR R+R
Sbjct: 121 HNDRSRERDR 130


>gb|AAM62695.1| glycine-rich RNA-binding protein-like [Arabidopsis thaliana]
          Length = 337

 Score =  139 bits (350), Expect = 3e-31
 Identities = 67/128 (52%), Positives = 87/128 (67%)
 Frame = -1

Query: 388 MTVDDNRSIYVGGLSYNVTEQTLRRAFNSYGPIIAVKIINDQAVGGKCYGFVTFKNPRSA 209
           MT+DD  S+YVGGL Y++TE+ +RR F+ YG ++ VKI+ND++V GKCYGFVTF N RSA
Sbjct: 1   MTMDDGNSVYVGGLPYDITEEAVRRVFSIYGSVLTVKIVNDRSVRGKCYGFVTFSNRRSA 60

Query: 208 MHAIDAMDGRNIEGRVVRVNEVKTRAGRSNFGQNEMKTRGGRSNFGRESFRQSYERGAGG 29
             AI+ MDG++I GR VRVN+V TR GR N G   ++  GG           +YER    
Sbjct: 61  DDAIEDMDGKSIGGRAVRVNDVTTRGGRMNLGPGRLQPHGGWDRSPDRRSDGNYERDRYS 120

Query: 28  DRSRSRER 5
           DRSR R+R
Sbjct: 121 DRSRERDR 128


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