BLASTX nr result

ID: Lithospermum22_contig00020297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00020297
         (1754 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25021.1| unknown [Picea sitchensis]                             122   2e-25
ref|XP_003528675.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A...   120   9e-25
ref|XP_003541623.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A...   119   2e-24
ref|XP_003550504.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A...   118   4e-24
gb|ABR18468.1| unknown [Picea sitchensis]                             117   7e-24

>gb|ABK25021.1| unknown [Picea sitchensis]
          Length = 422

 Score =  122 bits (307), Expect = 2e-25
 Identities = 53/70 (75%), Positives = 60/70 (85%)
 Frame = -2

Query: 1567 DACSICFEPFSDTDPSTVTGCKHEYHLHCILEWSQRSKECPICWQFLALKDPASQELLVA 1388
            DACSIC EPF +TDPSTVT CKHEYHL CILEW+QRSK+CP+CWQFL+LKDPASQELL A
Sbjct: 25   DACSICLEPFCETDPSTVTSCKHEYHLQCILEWAQRSKQCPMCWQFLSLKDPASQELLEA 84

Query: 1387 AGTERDSRLS 1358
               ER  R++
Sbjct: 85   VEQERTLRMN 94



 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 33/92 (35%), Positives = 57/92 (61%)
 Frame = -2

Query: 1018 IRSKIFAASTRCKESLSKGTSGFKEKLLARNTTVKELSREVQREMNAGIAGVAKMIERID 839
            ++S+  + S+RCKES +K T GF+E+L ARN+ V + ++E Q+E++ GIAGV +M+E +D
Sbjct: 267  LKSRFTSMSSRCKESFAKATRGFRERLSARNSAVTDHAQEAQQEVSDGIAGVTRMMEFLD 326

Query: 838  LSSKRSGASTLVSSCKVETSNMENKGKAVQDD 743
             + +  G    +S      S +    + + DD
Sbjct: 327  TNGRNRGGIISISDDMEGHSVLAPARQQIDDD 358


>ref|XP_003528675.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Glycine max]
          Length = 371

 Score =  120 bits (302), Expect = 9e-25
 Identities = 56/77 (72%), Positives = 59/77 (76%)
 Frame = -2

Query: 1567 DACSICFEPFSDTDPSTVTGCKHEYHLHCILEWSQRSKECPICWQFLALKDPASQELLVA 1388
            DACSIC EPFS  DP+T+T CKHEYHLHCILEWSQRSKECPICWQ L LKDPASQELL A
Sbjct: 34   DACSICLEPFSTHDPATITSCKHEYHLHCILEWSQRSKECPICWQLLILKDPASQELLNA 93

Query: 1387 AGTERDSRLSGNVHQIH 1337
               E + RLS      H
Sbjct: 94   --VEAEKRLSSRTVYSH 108



 Score =  103 bits (256), Expect = 2e-19
 Identities = 58/115 (50%), Positives = 82/115 (71%), Gaps = 2/115 (1%)
 Frame = -2

Query: 1015 RSKIFAASTRCKESLSKGTSGFKEKLLARNTTVKELSREVQREMNAGIAGVAKMIERIDL 836
            +SK+ AAS RCKES+SK T G KEKL+ARN +VKELS+ VQREMNAGIAGVA+M+ER+DL
Sbjct: 242  KSKLSAASARCKESISKNTRGLKEKLIARNASVKELSKGVQREMNAGIAGVARMVERLDL 301

Query: 835  SSKRSGASTLVSSCKVETSNMENKGKAVQDDTLARAPG--QTIVLSTEMSSSDSS 677
            +SKRS +  +             KGK+VQ++ + + P   ++ VL  +++S+ +S
Sbjct: 302  TSKRSSSPLI-----------PVKGKSVQENGVEQFPNKEESGVLVADVTSNAAS 345


>ref|XP_003541623.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Glycine max]
          Length = 359

 Score =  119 bits (299), Expect = 2e-24
 Identities = 54/68 (79%), Positives = 57/68 (83%)
 Frame = -2

Query: 1567 DACSICFEPFSDTDPSTVTGCKHEYHLHCILEWSQRSKECPICWQFLALKDPASQELLVA 1388
            D+CSIC EPFS  DPSTVT CKHEYHLHCI+EWSQRSKECPICWQ LALKDPASQELL A
Sbjct: 32   DSCSICLEPFSVHDPSTVTCCKHEYHLHCIIEWSQRSKECPICWQSLALKDPASQELLAA 91

Query: 1387 AGTERDSR 1364
               E+  R
Sbjct: 92   VEDEKCMR 99



 Score =  110 bits (274), Expect = 2e-21
 Identities = 63/117 (53%), Positives = 82/117 (70%)
 Frame = -2

Query: 1015 RSKIFAASTRCKESLSKGTSGFKEKLLARNTTVKELSREVQREMNAGIAGVAKMIERIDL 836
            +SK  AAS R KES+SK T G KEKLLA N +VKELS+ VQREMNAGIAGVA+MIER+DL
Sbjct: 224  KSKFSAASARYKESISKSTLGLKEKLLAHNVSVKELSKGVQREMNAGIAGVARMIERLDL 283

Query: 835  SSKRSGASTLVSSCKVETSNMENKGKAVQDDTLARAPGQTIVLSTEMSSSDSSPLTS 665
            SSKRS A  L++   V TS+  + GK+V+++ +  +P +    +    SSD  PL +
Sbjct: 284  SSKRSSA-PLIAVHSVATSDFPSSGKSVEENGIGGSPSKENGGAVHDVSSDVPPLVT 339


>ref|XP_003550504.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Glycine max]
          Length = 376

 Score =  118 bits (296), Expect = 4e-24
 Identities = 55/77 (71%), Positives = 58/77 (75%)
 Frame = -2

Query: 1567 DACSICFEPFSDTDPSTVTGCKHEYHLHCILEWSQRSKECPICWQFLALKDPASQELLVA 1388
            DACSIC EPFS  DP+T+T CKHEYHLHCILEW QRSKECPICWQ L LKDPASQELL A
Sbjct: 39   DACSICLEPFSTHDPATITSCKHEYHLHCILEWLQRSKECPICWQLLILKDPASQELLNA 98

Query: 1387 AGTERDSRLSGNVHQIH 1337
               E + RLS      H
Sbjct: 99   --VEAEKRLSSRTVYSH 113



 Score = 91.7 bits (226), Expect = 6e-16
 Identities = 51/91 (56%), Positives = 66/91 (72%)
 Frame = -2

Query: 1015 RSKIFAASTRCKESLSKGTSGFKEKLLARNTTVKELSREVQREMNAGIAGVAKMIERIDL 836
            +SK+ AAS RCKES+SK T G KEKL+ARN +VKELS+ VQ EMNAGIA VA+MIER+DL
Sbjct: 258  KSKLSAASARCKESISKNTRGLKEKLIARNASVKELSKGVQCEMNAGIACVARMIERLDL 317

Query: 835  SSKRSGASTLVSSCKVETSNMENKGKAVQDD 743
            +SK S ++ +             KGK+VQ++
Sbjct: 318  TSKWSSSALI-----------PVKGKSVQEN 337


>gb|ABR18468.1| unknown [Picea sitchensis]
          Length = 423

 Score =  117 bits (294), Expect = 7e-24
 Identities = 53/70 (75%), Positives = 57/70 (81%)
 Frame = -2

Query: 1567 DACSICFEPFSDTDPSTVTGCKHEYHLHCILEWSQRSKECPICWQFLALKDPASQELLVA 1388
            DACSIC EPF+D DP+TVT CKHEYHL CILEWSQRSKECP+C + L LKDPASQELL A
Sbjct: 28   DACSICLEPFTDNDPATVTSCKHEYHLQCILEWSQRSKECPMCLRILILKDPASQELLAA 87

Query: 1387 AGTERDSRLS 1358
               ER  RLS
Sbjct: 88   VEQERSFRLS 97



 Score = 85.9 bits (211), Expect = 3e-14
 Identities = 43/68 (63%), Positives = 54/68 (79%)
 Frame = -2

Query: 1015 RSKIFAASTRCKESLSKGTSGFKEKLLARNTTVKELSREVQREMNAGIAGVAKMIERIDL 836
            +S+  A STR KES+S+ T GFKEK  ARN  V EL REVQRE++AGIAGVA+++ER+D 
Sbjct: 273  KSRFNAVSTRYKESISRSTRGFKEKFFARNNAVTELGREVQREVSAGIAGVARIMERLDP 332

Query: 835  SSKRSGAS 812
            SSK +GAS
Sbjct: 333  SSKNNGAS 340


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