BLASTX nr result

ID: Lithospermum22_contig00020198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00020198
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309099.1| copper transporter [Populus trichocarpa] gi|...    76   2e-12
gb|AFK47015.1| unknown [Medicago truncatula]                           73   2e-11
gb|AFK47383.1| unknown [Medicago truncatula]                           72   6e-11
ref|XP_003516909.1| PREDICTED: copper transporter 6-like isoform...    68   9e-10
ref|NP_001238406.1| uncharacterized protein LOC100527849 [Glycin...    67   1e-09

>ref|XP_002309099.1| copper transporter [Populus trichocarpa]
           gi|222855075|gb|EEE92622.1| copper transporter [Populus
           trichocarpa]
          Length = 148

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 34/80 (42%), Positives = 48/80 (60%)
 Frame = -1

Query: 247 GWPDNDLGMYXXXXXXXXXXXXXXXXXATSPSSKPAENRPFLGGLMQASVYAIRMTLSYL 68
           GWP+  LGMY                 + SP++K   + P  G L+Q  VYA+RM  +Y+
Sbjct: 45  GWPNGSLGMYMLAFFCVFLLAAAIEIFSVSPTAKRGTHNPIAGALIQTCVYAVRMGFAYM 104

Query: 67  IMLSVMSFNIGVFVAAVVGH 8
           +ML+VMSFN+G+F+AAV GH
Sbjct: 105 VMLAVMSFNLGIFIAAVAGH 124


>gb|AFK47015.1| unknown [Medicago truncatula]
          Length = 145

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 36/80 (45%), Positives = 48/80 (60%)
 Frame = -1

Query: 247 GWPDNDLGMYXXXXXXXXXXXXXXXXXATSPSSKPAENRPFLGGLMQASVYAIRMTLSYL 68
           GWP+N LGMY                 +  PS K   N P  GGL+Q+ VY  R++  YL
Sbjct: 38  GWPNNSLGMYILAILFVFILALAAEVLSNQPSIKRGTN-PLKGGLIQSGVYFFRISFIYL 96

Query: 67  IMLSVMSFNIGVFVAAVVGH 8
           +ML+VMSFN+G+F+AAV+GH
Sbjct: 97  LMLAVMSFNVGIFIAAVLGH 116


>gb|AFK47383.1| unknown [Medicago truncatula]
          Length = 145

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/80 (45%), Positives = 46/80 (57%)
 Frame = -1

Query: 247 GWPDNDLGMYXXXXXXXXXXXXXXXXXATSPSSKPAENRPFLGGLMQASVYAIRMTLSYL 68
           GWP+N LGMY                 +  PS K   N P  GGL Q+ VY  R++  YL
Sbjct: 38  GWPNNSLGMYILAILFVFILALAAEVLSNQPSIKRGTN-PLKGGLTQSGVYFFRISFIYL 96

Query: 67  IMLSVMSFNIGVFVAAVVGH 8
           +ML+VMSFN+G+F+AAV GH
Sbjct: 97  LMLAVMSFNVGIFIAAVFGH 116


>ref|XP_003516909.1| PREDICTED: copper transporter 6-like isoform 1 [Glycine max]
           gi|356496104|ref|XP_003516910.1| PREDICTED: copper
           transporter 6-like isoform 2 [Glycine max]
          Length = 144

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/80 (41%), Positives = 46/80 (57%)
 Frame = -1

Query: 247 GWPDNDLGMYXXXXXXXXXXXXXXXXXATSPSSKPAENRPFLGGLMQASVYAIRMTLSYL 68
           GWP + +G Y                 +  P+ K   N P +GGL QA+ Y  R++L YL
Sbjct: 38  GWPKHSVGHYILAILFVFFLAIIAEVVSNKPNIKRGTN-PIIGGLAQATFYVFRISLLYL 96

Query: 67  IMLSVMSFNIGVFVAAVVGH 8
           +ML+VMSFN+G+F+AAV GH
Sbjct: 97  VMLAVMSFNLGIFIAAVAGH 116


>ref|NP_001238406.1| uncharacterized protein LOC100527849 [Glycine max]
           gi|255633370|gb|ACU17042.1| unknown [Glycine max]
          Length = 146

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 33/79 (41%), Positives = 46/79 (58%)
 Frame = -1

Query: 244 WPDNDLGMYXXXXXXXXXXXXXXXXXATSPSSKPAENRPFLGGLMQASVYAIRMTLSYLI 65
           WP+N++GMY                 +  P  KP  + P +GGL+QA V   R+   Y++
Sbjct: 40  WPENNVGMYILALIFVFFLAMAVEVLSNQPLLKPGTS-PLVGGLIQAGVRLFRIGFVYMV 98

Query: 64  MLSVMSFNIGVFVAAVVGH 8
           ML+VMSFN G+F+AAVVGH
Sbjct: 99  MLAVMSFNAGIFIAAVVGH 117


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