BLASTX nr result

ID: Lithospermum22_contig00020196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00020196
         (1417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAU04618.1| CENP-C [Solanum tuberosum]                             245   2e-62
emb|CBI36186.3| unnamed protein product [Vitis vinifera]              242   2e-61
dbj|BAI48085.1| centromere protein C [Nicotiana tomentosiformis]      231   5e-58
dbj|BAI48084.1| centromere protein C homologue [Nicotiana tabacum]    229   2e-57
dbj|BAI48081.1| centromere protein C homologue [Nicotiana tabacu...   228   4e-57

>gb|AAU04618.1| CENP-C [Solanum tuberosum]
          Length = 384

 Score =  245 bits (626), Expect = 2e-62
 Identities = 162/374 (43%), Positives = 221/374 (59%), Gaps = 16/374 (4%)
 Frame = -3

Query: 1415 IRVSSDSN------HLDSIHQTIKSLGVNNPEKVLEEAKKIVDGGSELLNSNYATFIASM 1254
            +RVS+D++       L+ IH  +KS+    P  +LEEA++IVD G+ELLN+ + +FI S 
Sbjct: 27   VRVSTDASVSVNPKDLELIHNFMKSMETKGPG-LLEEAREIVDNGAELLNTKFTSFILSK 85

Query: 1253 GIEDASLEMENEKPLQ-RRPGFGRRRAKFSMKRNS-SQPDSSLLTSFDVAKFPDPEEFFS 1080
            GI D  L M+ ++ LQ RRPG GR+RA+FS+K  S SQP  S+    D+ +  DP EFFS
Sbjct: 86   GI-DGDLAMKGKEKLQERRPGLGRKRARFSLKPPSTSQPTVSVAPRLDIDQLSDPVEFFS 144

Query: 1079 ELQKHENAQKEIKRLMGVSSIDEDI--PPHNALKRRPGILGDRRRSVNYKYHRAKVISET 906
              +K E+A+KEI+R  G S  D D+  PP NA +RRPGILG   +SV YK+  +    E 
Sbjct: 145  VAEKLEDAEKEIERQKGSSIHDPDVNNPPANARRRRPGILG---KSVKYKHRFSSTQPEN 201

Query: 905  EETDVPSPEPIELTVPKPPNNNSHETNSDFNVELPDYDAAGP--KTEHEVNMILDELLSS 732
            ++  + S E +E  +     +   E     NVEL + +  G   KTE+ +N ILDELLS 
Sbjct: 202  DDAFISSQETLEDDILVEHGSQLPEELHGLNVELQEAELTGSVKKTENRINKILDELLSG 261

Query: 731  NTEDLDGYGAVSLLQERLNIKPIDLSTLSIPNFNDTEKIDYVSLGKNLPLPQKSSFSVED 552
            + EDLD   AVS LQERL I PI+L TL IP F  T K+D  + G+ +  P+K S  V +
Sbjct: 262  SDEDLDRDMAVSKLQERLQINPIELGTLCIPEFPVTGKLDGKAFGERIQKPRKFSLEVRE 321

Query: 551  FM----QGTPLTQKQMVRSANRSLESSTPRNLLGSLSLESSTPRNLLGSLSELRKRVMQS 384
             +    +GTP + KQ   S    L S TP             P++  GSLS L+K++MQS
Sbjct: 322  LVKSATEGTPSSHKQHEESPASKLASPTP-------------PKSPFGSLSLLKKKLMQS 368

Query: 383  NPLGDLFSPLDIDL 342
            NPL D FSPL+IDL
Sbjct: 369  NPLRDPFSPLNIDL 382


>emb|CBI36186.3| unnamed protein product [Vitis vinifera]
          Length = 899

 Score =  242 bits (618), Expect = 2e-61
 Identities = 162/423 (38%), Positives = 234/423 (55%), Gaps = 13/423 (3%)
 Frame = -3

Query: 1409 VSSDSNH--LDSIHQTIKSLGVNNPEKVLEEAKKIVDGGSELLNSNYATFIASMGIEDAS 1236
            VS  S H  +DS+H  +KS+ + +P K+LE+AK I+DGGSELLN N+ + +AS       
Sbjct: 33   VSKPSGHDNIDSLHSYLKSMALRSPTKLLEQAKSILDGGSELLNPNFPSDVASEDNCGPI 92

Query: 1235 LEMENEKPLQRRPGFGRRRAKFSMKRNSSQPDSSLLTSFDVAKFPDPEEFFSELQKHENA 1056
             E   E P +RRP  GR+RA+FS+K +SSQP   L  S D+ K  DPEE+F   +K ENA
Sbjct: 93   SEKLKENPPERRPALGRKRARFSLKPDSSQPTMVLEPSLDIDKLQDPEEYFLAHEKLENA 152

Query: 1055 QKEIKRLMGVSSIDEDIPPHN----ALKRRPGILGDRRRSVNYKYHRAKVISETEETDVP 888
            +KE++R  G   +  D+  +N    A  RRPGILG   RSV+YK+H + ++S+ +E  +P
Sbjct: 153  KKELQRQRG--GVLMDLNQYNLSTTARHRRPGILG---RSVSYKHHYSSLVSDNDENLMP 207

Query: 887  SPEPIELTVPKPPNNNSHETNSDFNVELPDYDAAGPKT--EHEVNMILDELLSSNTEDLD 714
            SP  +E  +  P N +S     D NV L + +     T  E++V+ ILDELLS N EDLD
Sbjct: 208  SPATVEQMIVSPSNYSSQVEMVDPNVALQERELTVSVTQAENKVDEILDELLSGNCEDLD 267

Query: 713  GYGAVSLLQERLNIKPIDLSTLSIPNFNDTEKIDYVSLGKNLPLPQKSSFSVEDFMQG-- 540
            G GA++ LQERL IKPIDL  L +P  +D ++ D+ S G N    + S   ++  ++G  
Sbjct: 268  GDGALTFLQERLQIKPIDLDKLCLPELHDIQRNDFKSSGGNWLRHRDSLSDIKSMLEGLS 327

Query: 539  --TPLTQKQMVRSANRSLESSTPRNLLGSLSLESSTPRNLLGSLSELRKRVMQSNPLGDL 366
              TP+ + Q+V S   +L S TP             P++   S+  L++ ++QSN   D 
Sbjct: 328  SKTPIKKGQVVESFVHTLASPTP-------------PKSPFASICLLKRHILQSNLTSDP 374

Query: 365  FSPLDIDLTEPTNSQPDQGS-KPTDPNTGLGERSTEGSLAGVSIGKILSRQSSHIDVAEN 189
            FS L ++L+   NS   + S K +D      E S    L  V +      +   I VA  
Sbjct: 375  FSVLKVNLSPARNSSTVKSSDKQSDQIENGKELSFSAKLKSVIL------EGDDIAVANK 428

Query: 188  ISH 180
             SH
Sbjct: 429  SSH 431


>dbj|BAI48085.1| centromere protein C [Nicotiana tomentosiformis]
          Length = 714

 Score =  231 bits (588), Expect = 5e-58
 Identities = 151/374 (40%), Positives = 213/374 (56%), Gaps = 9/374 (2%)
 Frame = -3

Query: 1409 VSSDSNHLDSIHQTIKSLGVNNPEKVLEEAKKIVDGGSELLNSNYATFIASMGIEDASLE 1230
            VS D   L+S+H  +KSL    P K+ EEA+ IVD  +ELLN+        MGI+     
Sbjct: 33   VSVDPKDLESVHNFMKSLETKMPAKLFEEARAIVDNAAELLNTK------CMGIDGDLAM 86

Query: 1229 MENEKPLQRRPGFGRRRAKFSMKRNSSQPD---SSLLTSFDVAKFPDPEEFFSELQKHEN 1059
               EKP +RRPG GRR+ +FS K ++ +P     S L S D+ +  DP EFF+  ++ E 
Sbjct: 87   KGKEKPKERRPGLGRRKPRFSFKPSTCKPPVILGSTLESLDMDQLEDPVEFFAAAERWEE 146

Query: 1058 AQKEIKRLMGVSSIDEDI--PPHNALKRRPGILGDRRRSVNYKYHRAKVISETEETDVPS 885
            A+KE+KRL G+S I+ED+  PP NA +RRPGIL    +SV YK+  + + SE ++  + S
Sbjct: 147  AEKEMKRLKGIS-INEDVNDPPANARRRRPGILN---KSVRYKHRFSSIESENDDAFISS 202

Query: 884  PEPIELTVPKPPNNNSHETNSDFNVELPDYDAAGPKTEHEVNMILDELLSSNTEDLDGYG 705
             E +   +    N+   E     NVEL + D+ G   + E N IL+ELLSSN  DL+G  
Sbjct: 203  QETLGSDIRAGQNSQLPEEPPGLNVELQEADSPGSVEKTENNGILNELLSSNGGDLNGGM 262

Query: 704  AVSLLQERLNIKPIDLSTLSIPNFNDTEKIDYVSLGKNLPLPQKSSFSVEDFM----QGT 537
            A+S LQE L IKPI+L  L  P F  T K+D  + G+ +  P+K S  + D +    +GT
Sbjct: 263  ALSKLQEWLQIKPIELGPLCFPEFPMTGKVDGKAFGERIRKPRKFSLEIRDLVKSATEGT 322

Query: 536  PLTQKQMVRSANRSLESSTPRNLLGSLSLESSTPRNLLGSLSELRKRVMQSNPLGDLFSP 357
              T++Q   S   +L S TP             P++   SLS LR+++ QSNPL D FSP
Sbjct: 323  TSTRRQHEESPTNNLASPTP-------------PKSPHASLSLLRQKISQSNPLRDPFSP 369

Query: 356  LDIDLTEPTNSQPD 315
            L+IDL + ++SQ D
Sbjct: 370  LNIDL-DNSDSQSD 382


>dbj|BAI48084.1| centromere protein C homologue [Nicotiana tabacum]
          Length = 714

 Score =  229 bits (583), Expect = 2e-57
 Identities = 150/374 (40%), Positives = 212/374 (56%), Gaps = 9/374 (2%)
 Frame = -3

Query: 1409 VSSDSNHLDSIHQTIKSLGVNNPEKVLEEAKKIVDGGSELLNSNYATFIASMGIEDASLE 1230
            VS D   L+S+H  +KSL    P K+ EEA+ IVD  +ELLN+        MGI+     
Sbjct: 33   VSVDPKDLESVHNFMKSLETKMPAKLFEEARAIVDNAAELLNTK------CMGIDGDLAM 86

Query: 1229 MENEKPLQRRPGFGRRRAKFSMKRNSSQPD---SSLLTSFDVAKFPDPEEFFSELQKHEN 1059
               EKP +RRPG GRR+ +FS K ++ +P     S L S D+ +  DP EFF+  ++ E 
Sbjct: 87   KGKEKPKERRPGLGRRKPRFSFKPSTCKPPVILGSTLESLDMDQLEDPVEFFAAAERWEE 146

Query: 1058 AQKEIKRLMGVSSIDEDI--PPHNALKRRPGILGDRRRSVNYKYHRAKVISETEETDVPS 885
            A+KE+KRL G+S I+ED+  PP NA +RRPGIL    +SV YK+  + + SE ++  + S
Sbjct: 147  AEKEMKRLKGIS-INEDVNDPPANARRRRPGILN---KSVRYKHRFSSIESENDDAFISS 202

Query: 884  PEPIELTVPKPPNNNSHETNSDFNVELPDYDAAGPKTEHEVNMILDELLSSNTEDLDGYG 705
             E +   +    N+   E     NVEL + D+ G   + E N IL+ELLSSN  DL+G  
Sbjct: 203  QETLGSDIRAGQNSQLPEEPPGLNVELQEADSPGSVEKTENNGILNELLSSNGGDLNGGM 262

Query: 704  AVSLLQERLNIKPIDLSTLSIPNFNDTEKIDYVSLGKNLPLPQKSSFSVEDFM----QGT 537
            A+S LQE L IKPI+L  L  P F    K+D  + G+ +  P+K S  + D +    +GT
Sbjct: 263  ALSKLQEWLQIKPIELGPLCFPEFPMAGKVDGKAFGERIRKPRKFSLEIRDLVKSATEGT 322

Query: 536  PLTQKQMVRSANRSLESSTPRNLLGSLSLESSTPRNLLGSLSELRKRVMQSNPLGDLFSP 357
              T++Q   S   +L S TP             P++   SLS LR+++ QSNPL D FSP
Sbjct: 323  TSTRRQHEESPTNNLASPTP-------------PKSPHASLSLLRQKISQSNPLRDPFSP 369

Query: 356  LDIDLTEPTNSQPD 315
            L+IDL + ++SQ D
Sbjct: 370  LNIDL-DNSDSQSD 382


>dbj|BAI48081.1| centromere protein C homologue [Nicotiana tabacum]
            gi|262263167|dbj|BAI48086.1| centromere protein C
            [Nicotiana sylvestris]
          Length = 715

 Score =  228 bits (580), Expect = 4e-57
 Identities = 148/375 (39%), Positives = 214/375 (57%), Gaps = 10/375 (2%)
 Frame = -3

Query: 1409 VSSDSNHLDSIHQTIKSLGVNNPEKVLEEAKKIVDGGSELLNSNYATFIASMGIEDASLE 1230
            VS D  +L+S+H  +KSL   +  K+ EEA+ IVD  +ELLN+        MG++     
Sbjct: 33   VSVDPKNLESVHNFMKSLETKSSAKLFEEARAIVDNAAELLNTK------CMGVDGDLAM 86

Query: 1229 MENEKPLQRRPGFGRRRAKFSMKRNSSQPD----SSLLTSFDVAKFPDPEEFFSELQKHE 1062
               E+P +RRPG GRR+ +FS K ++SQP      S L S D+ +  DP +FF+  ++ E
Sbjct: 87   KGKEQPKERRPGLGRRKPRFSFKPSTSQPPPVILGSTLESLDMDQLEDPVDFFAAAERWE 146

Query: 1061 NAQKEIKRLMGVSSIDEDI--PPHNALKRRPGILGDRRRSVNYKYHRAKVISETEETDVP 888
             A+KE+KRL G+S I++D+  PP NA +RRPGIL    +SV YK+  + + SE ++  + 
Sbjct: 147  EAEKELKRLKGIS-INDDVNDPPANARRRRPGILN---KSVRYKHRFSSIQSENDDAFIS 202

Query: 887  SPEPIELTVPKPPNNNSHETNSDFNVELPDYDAAGPKTEHEVNMILDELLSSNTEDLDGY 708
            S + +        N+   E     NVEL + D+ G   + E+N IL+ELLSSN EDL G 
Sbjct: 203  SQKTLGSDTRACQNSQLPEELPGLNVELQEADSPGSLEKTEINGILNELLSSNGEDLIGE 262

Query: 707  GAVSLLQERLNIKPIDLSTLSIPNFNDTEKIDYVSLGKNLPLPQKSSFSVEDFM----QG 540
             A+S LQERL IKPI+L  L IP F  T K+D  + G+ +  P K S  + D +    +G
Sbjct: 263  MALSNLQERLGIKPIELGPLCIPEFPMTGKVDGKAFGERIRKPWKFSQDIRDLVKSATEG 322

Query: 539  TPLTQKQMVRSANRSLESSTPRNLLGSLSLESSTPRNLLGSLSELRKRVMQSNPLGDLFS 360
            T  T++Q   S   +L S TP             P++   SLS L++++ +SNPL D FS
Sbjct: 323  TASTRRQHEESPTNNLASPTP-------------PKSPHASLSLLKQKIFRSNPLRDPFS 369

Query: 359  PLDIDLTEPTNSQPD 315
            PL+IDL    +SQ D
Sbjct: 370  PLNIDLYN-NDSQSD 383


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