BLASTX nr result
ID: Lithospermum22_contig00020192
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00020192
(1493 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-a... 544 e-152
ref|XP_002308876.1| chromatin remodeling complex subunit [Populu... 534 e-149
ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|2026... 504 e-140
sp|Q9FF61.1|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related m... 504 e-140
ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis ... 504 e-140
>ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 3-like 1-like
[Vitis vinifera]
Length = 874
Score = 544 bits (1402), Expect = e-152
Identities = 274/458 (59%), Positives = 344/458 (75%), Gaps = 4/458 (0%)
Frame = +2
Query: 8 SPLKKVEWWRIILDEAHLIKNPNAQQSRAVASLTAKRRWVVSGTPIQNDSFDMFSLLAFL 187
SP+KK+EWWR+ILDEAH+IKN NAQQS+AV +L AKRRWVV+GTPIQN +FD+FSL+AFL
Sbjct: 419 SPVKKIEWWRVILDEAHMIKNVNAQQSQAVTNLRAKRRWVVTGTPIQNGTFDLFSLMAFL 478
Query: 188 RLEPLSTRKWWNNYIAFPLNRGEKKGLSRLQVLMASISLRRTKEKCLNDLPSKSIQTFLV 367
R EP S + +W + + PL +G++KGLSRLQVLMA+ISLRRTK+K L LP KS++T V
Sbjct: 479 RFEPFSIKSYWQSLVQRPLGQGKEKGLSRLQVLMATISLRRTKDKGLIGLPPKSVETCFV 538
Query: 368 DLSEEEREFYDQMEAEVKNFVQGYISSRLATSNYTNVLSILIRLRQACVDIALCPSTIGD 547
+LS EERE YDQMEAE K ++ YI + NY+ VL I++RLRQ C D+ALCPS +
Sbjct: 539 ELSAEERELYDQMEAEGKCVIRDYIDAGSVMRNYSTVLGIILRLRQICTDVALCPSDLRS 598
Query: 548 LA---SLEDARSKPELLNKLKLLMDENEEVDFDCPICITTPSDAVITSCAHIFCRVCILT 718
L ++ED + PELL K+ L++ + E DFDCPICI+ P++ VIT CAHIFCRVCIL
Sbjct: 599 LLLSNNIEDVSNNPELLKKMVLVLQDGE--DFDCPICISPPTNIVITCCAHIFCRVCILK 656
Query: 719 TLRKSKESCPLCRCPLRVSDLYSLPPE-VXXXXXXXXXXXXXXXKVMALLKLLSASQEQD 895
TL+++K CPLCR PL SDL+S PPE KV+ LLK LSAS++Q+
Sbjct: 657 TLKRTKPCCPLCRHPLSQSDLFSAPPESTETDNSEIPSSECTSSKVLTLLKFLSASRDQN 716
Query: 896 PTRKSVVFSQFRKLLISLEGTLKEAGFKVLRVDGSMTARKRGQIIEEFDTSVPDGPTILL 1075
P+ KSVVFSQFRK+L+ LE LK AGFK LR+DGSM A++R Q+IEEF P+GPT+LL
Sbjct: 717 PSTKSVVFSQFRKMLLLLEQPLKAAGFKTLRLDGSMNAKRRAQVIEEFGAPGPNGPTVLL 776
Query: 1076 ASLKAVGAGVNLTAASQVYLMEPWWNPAVEEQAMDRVHRIGQAKEVNIVRMIARNTVEER 1255
ASLKA GAG+NLTAAS+VYL+EPWWNPAVEEQAMDRVHRIGQ ++V IVR+IARN++EER
Sbjct: 777 ASLKASGAGINLTAASRVYLLEPWWNPAVEEQAMDRVHRIGQKEDVKIVRLIARNSIEER 836
Query: 1256 IXXXXXXXXXXXXXAFGRKGSKEQREITASDLATLMNL 1369
I AFGR+G K++RE+ DL LM+L
Sbjct: 837 ILELQERKKKLAKEAFGRRGLKDRREVGVEDLRMLMSL 874
>ref|XP_002308876.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222854852|gb|EEE92399.1| chromatin remodeling complex
subunit [Populus trichocarpa]
Length = 799
Score = 534 bits (1375), Expect = e-149
Identities = 269/460 (58%), Positives = 342/460 (74%), Gaps = 4/460 (0%)
Frame = +2
Query: 2 EDSPLKKVEWWRIILDEAHLIKNPNAQQSRAVASLTAKRRWVVSGTPIQNDSFDMFSLLA 181
EDSP+KK++W R+ILDEAH+IKN N+QQSRAV L AKRRWVV+GTPIQN S D+FSL+A
Sbjct: 342 EDSPVKKIDWCRVILDEAHVIKNANSQQSRAVTKLNAKRRWVVTGTPIQNGSLDLFSLMA 401
Query: 182 FLRLEPLSTRKWWNNYIAFPLNRGEKKGLSRLQVLMASISLRRTKEKCLNDLPSKSIQTF 361
FLR EP S + +W + + PL +G KKGLSRLQVLMA+ISLRRTK+K + LPSK+++T
Sbjct: 402 FLRFEPFSIKSYWQSLLQRPLAQGNKKGLSRLQVLMATISLRRTKDKGVVGLPSKTVETH 461
Query: 362 LVDLSEEEREFYDQMEAEVKNFVQGYISSRLATSNYTNVLSILIRLRQACVDIALCPSTI 541
++LS EERE YDQMEAE K VQ +I++ N++ VL I++RLRQ C D+ALCPS +
Sbjct: 462 YIELSGEERELYDQMEAEAKGVVQNFINTNNLMRNFSTVLCIILRLRQICNDLALCPSDL 521
Query: 542 GDLA---SLEDARSKPELLNKLKLLMDENEEVDFDCPICITTPSDAVITSCAHIFCRVCI 712
L S+ED + PELL K+ ++ + E DFDCPICI P++ VIT CAHIFCR CI
Sbjct: 522 RSLLPSNSIEDVSNNPELLMKMVTVLQDGE--DFDCPICICPPTETVITRCAHIFCRPCI 579
Query: 713 LTTLRKSKESCPLCRCPLRVSDLYSLPPE-VXXXXXXXXXXXXXXXKVMALLKLLSASQE 889
L TL+++K+ CPLCR PL VSDL+S PPE KV AL+KLL AS+
Sbjct: 580 LKTLQRAKQCCPLCRRPLSVSDLFSAPPESSGSDNANTSSRTTTSSKVSALIKLLIASRV 639
Query: 890 QDPTRKSVVFSQFRKLLISLEGTLKEAGFKVLRVDGSMTARKRGQIIEEFDTSVPDGPTI 1069
++P RKSVVFSQF+K+L+ LE LKEAGFK+LR+DGSM A+KR Q+I++F PDGPT+
Sbjct: 640 ENPARKSVVFSQFQKMLVLLEEPLKEAGFKILRLDGSMNAKKRAQVIKQFGVPGPDGPTV 699
Query: 1070 LLASLKAVGAGVNLTAASQVYLMEPWWNPAVEEQAMDRVHRIGQAKEVNIVRMIARNTVE 1249
LLASLKA GAG+NL AS+VYL+EPWWNPAVEEQAMDRVHRIGQ ++V +VR+IA++++E
Sbjct: 700 LLASLKASGAGINLAVASRVYLLEPWWNPAVEEQAMDRVHRIGQEEDVTVVRLIAQSSIE 759
Query: 1250 ERIXXXXXXXXXXXXXAFGRKGSKEQREITASDLATLMNL 1369
ERI AFGR+G+K QRE+ DL LM+L
Sbjct: 760 ERILEMQERKKKLAKEAFGRRGTKTQREVGIDDLRALMSL 799
>ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|20260624|gb|AAM13210.1|
helicase-like transcription factor-like protein
[Arabidopsis thaliana] gi|31711770|gb|AAP68241.1|
At5g05130 [Arabidopsis thaliana]
gi|332003449|gb|AED90832.1| DNA/RNA helicase [Arabidopsis
thaliana]
Length = 862
Score = 504 bits (1298), Expect = e-140
Identities = 259/462 (56%), Positives = 322/462 (69%), Gaps = 6/462 (1%)
Frame = +2
Query: 2 EDSPLKKVEWWRIILDEAHLIKNPNAQQSRAVASLTAKRRWVVSGTPIQNDSFDMFSLLA 181
EDSP+KK+EW RIILDEAH IKN NAQQSR V L A RRW V+GTPIQN SFD++SL+A
Sbjct: 403 EDSPVKKMEWLRIILDEAHTIKNANAQQSRVVCKLKASRRWAVTGTPIQNGSFDLYSLMA 462
Query: 182 FLRLEPLSTRKWWNNYIAFPLNRGEKKGLSRLQVLMASISLRRTKEKCLNDLPSKSIQTF 361
FLR EP S + +W + I PL +G KKGLSRLQVLMA+ISLRRTKEK L LP K+++T
Sbjct: 463 FLRFEPFSIKSYWQSLIQRPLGQGNKKGLSRLQVLMATISLRRTKEKSLIGLPPKTVETC 522
Query: 362 LVDLSEEEREFYDQMEAEVKNFVQGYISSRLATSNYTNVLSILIRLRQACVDIALCPSTI 541
V+LS EER+ YD ME E K VQ I++ NY+ VLSI++RLRQ C D++LCP +
Sbjct: 523 YVELSPEERQLYDHMEGEAKGVVQNLINNGSLMRNYSTVLSIILRLRQLCDDMSLCPPEL 582
Query: 542 GDL---ASLEDARSKPELLNKLKLLMDENEEVDFDCPICITTPSDAVITSCAHIFCRVCI 712
S+ED KPELL KL + + E DFDCPICI+ P++ +IT CAHIFCR CI
Sbjct: 583 RSFTTSTSVEDVTDKPELLQKLVAALQDGE--DFDCPICISPPTNIIITRCAHIFCRACI 640
Query: 713 LTTLRKSKESCPLCRCPLRVSDLYSL---PPEVXXXXXXXXXXXXXXXKVMALLKLLSAS 883
L TL++SK CPLCR L SDLY+ PP+ KV ALL LL AS
Sbjct: 641 LQTLQRSKPLCPLCRGSLTQSDLYNAPPPPPDSSNTDGEDAKSSTKSSKVSALLSLLMAS 700
Query: 884 QEQDPTRKSVVFSQFRKLLISLEGTLKEAGFKVLRVDGSMTARKRGQIIEEFDTSVPDGP 1063
++++P KSVVFSQFRK+L+ LE LK AGF +LR+DG+MT +KR Q+I EF GP
Sbjct: 701 RQENPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFGNPELTGP 760
Query: 1064 TILLASLKAVGAGVNLTAASQVYLMEPWWNPAVEEQAMDRVHRIGQAKEVNIVRMIARNT 1243
+LLASLKA G G+NLTAAS+VYL +PWWNPAVEEQAMDR+HRIGQ +EV ++RMIARN+
Sbjct: 761 VVLLASLKASGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNS 820
Query: 1244 VEERIXXXXXXXXXXXXXAFGRKGSKEQREITASDLATLMNL 1369
+EER+ AF R+ K++RE+ D+ LM+L
Sbjct: 821 IEERVLELQQKKKNLANEAFKRRQKKDEREVNVEDVVALMSL 862
>sp|Q9FF61.1|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member
3-like 1; Short=SMARCA3-like protein 1
gi|10178052|dbj|BAB11535.1| helicase-like transcription
factor-like protein [Arabidopsis thaliana]
Length = 881
Score = 504 bits (1298), Expect = e-140
Identities = 259/462 (56%), Positives = 322/462 (69%), Gaps = 6/462 (1%)
Frame = +2
Query: 2 EDSPLKKVEWWRIILDEAHLIKNPNAQQSRAVASLTAKRRWVVSGTPIQNDSFDMFSLLA 181
EDSP+KK+EW RIILDEAH IKN NAQQSR V L A RRW V+GTPIQN SFD++SL+A
Sbjct: 422 EDSPVKKMEWLRIILDEAHTIKNANAQQSRVVCKLKASRRWAVTGTPIQNGSFDLYSLMA 481
Query: 182 FLRLEPLSTRKWWNNYIAFPLNRGEKKGLSRLQVLMASISLRRTKEKCLNDLPSKSIQTF 361
FLR EP S + +W + I PL +G KKGLSRLQVLMA+ISLRRTKEK L LP K+++T
Sbjct: 482 FLRFEPFSIKSYWQSLIQRPLGQGNKKGLSRLQVLMATISLRRTKEKSLIGLPPKTVETC 541
Query: 362 LVDLSEEEREFYDQMEAEVKNFVQGYISSRLATSNYTNVLSILIRLRQACVDIALCPSTI 541
V+LS EER+ YD ME E K VQ I++ NY+ VLSI++RLRQ C D++LCP +
Sbjct: 542 YVELSPEERQLYDHMEGEAKGVVQNLINNGSLMRNYSTVLSIILRLRQLCDDMSLCPPEL 601
Query: 542 GDL---ASLEDARSKPELLNKLKLLMDENEEVDFDCPICITTPSDAVITSCAHIFCRVCI 712
S+ED KPELL KL + + E DFDCPICI+ P++ +IT CAHIFCR CI
Sbjct: 602 RSFTTSTSVEDVTDKPELLQKLVAALQDGE--DFDCPICISPPTNIIITRCAHIFCRACI 659
Query: 713 LTTLRKSKESCPLCRCPLRVSDLYSL---PPEVXXXXXXXXXXXXXXXKVMALLKLLSAS 883
L TL++SK CPLCR L SDLY+ PP+ KV ALL LL AS
Sbjct: 660 LQTLQRSKPLCPLCRGSLTQSDLYNAPPPPPDSSNTDGEDAKSSTKSSKVSALLSLLMAS 719
Query: 884 QEQDPTRKSVVFSQFRKLLISLEGTLKEAGFKVLRVDGSMTARKRGQIIEEFDTSVPDGP 1063
++++P KSVVFSQFRK+L+ LE LK AGF +LR+DG+MT +KR Q+I EF GP
Sbjct: 720 RQENPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFGNPELTGP 779
Query: 1064 TILLASLKAVGAGVNLTAASQVYLMEPWWNPAVEEQAMDRVHRIGQAKEVNIVRMIARNT 1243
+LLASLKA G G+NLTAAS+VYL +PWWNPAVEEQAMDR+HRIGQ +EV ++RMIARN+
Sbjct: 780 VVLLASLKASGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNS 839
Query: 1244 VEERIXXXXXXXXXXXXXAFGRKGSKEQREITASDLATLMNL 1369
+EER+ AF R+ K++RE+ D+ LM+L
Sbjct: 840 IEERVLELQQKKKNLANEAFKRRQKKDEREVNVEDVVALMSL 881
>ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297316976|gb|EFH47398.1| SNF2 domain-containing
protein [Arabidopsis lyrata subsp. lyrata]
Length = 861
Score = 504 bits (1297), Expect = e-140
Identities = 260/462 (56%), Positives = 325/462 (70%), Gaps = 6/462 (1%)
Frame = +2
Query: 2 EDSPLKKVEWWRIILDEAHLIKNPNAQQSRAVASLTAKRRWVVSGTPIQNDSFDMFSLLA 181
EDSP+KK+EW RIILDEAH IKN NAQQSR V+ L A RRW V+GTPIQN SFD++SL+A
Sbjct: 402 EDSPVKKMEWLRIILDEAHTIKNANAQQSRVVSKLKASRRWAVTGTPIQNGSFDLYSLMA 461
Query: 182 FLRLEPLSTRKWWNNYIAFPLNRGEKKGLSRLQVLMASISLRRTKEKCLNDLPSKSIQTF 361
FLR EP S + +W + I PL +G KKGLSRLQVLMA+ISLRRTKEK L LP K+++T
Sbjct: 462 FLRFEPFSIKSYWQSLIQRPLGQGNKKGLSRLQVLMATISLRRTKEKSLIGLPPKTVETC 521
Query: 362 LVDLSEEEREFYDQMEAEVKNFVQGYISSRLATSNYTNVLSILIRLRQACVDIALCPSTI 541
V+LS EER+ YD ME E K VQ I++ NY+ VLSI++RLRQ C DI+LCP +
Sbjct: 522 YVELSPEERQLYDHMEGEAKGVVQNLINNGSLMRNYSTVLSIILRLRQLCDDISLCPPEL 581
Query: 542 GDL---ASLEDARSKPELLNKLKLLMDENEEVDFDCPICITTPSDAVITSCAHIFCRVCI 712
S+ED KPELL KL ++ + E DFDCPICI+ P++ +IT CAHIFCR CI
Sbjct: 582 RSFTTSTSVEDVIDKPELLQKLIAVLQDGE--DFDCPICISPPTNIIITRCAHIFCRACI 639
Query: 713 LTTLRKSKESCPLCRCPLRVSDLYSL---PPEVXXXXXXXXXXXXXXXKVMALLKLLSAS 883
L TL++SK CPLCR L SDLY+ PP+ KV ALL LL AS
Sbjct: 640 LQTLQRSKPLCPLCRGSLTQSDLYNAPPPPPDDSNTDGEDTKSSTKSSKVSALLSLLIAS 699
Query: 884 QEQDPTRKSVVFSQFRKLLISLEGTLKEAGFKVLRVDGSMTARKRGQIIEEFDTSVPDGP 1063
+++ P KSVVFSQFRK+L+ LE LK AGF +LR+DG+MT +KR Q+I EF GP
Sbjct: 700 RQESPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTLKKRTQVIGEFGNPELTGP 759
Query: 1064 TILLASLKAVGAGVNLTAASQVYLMEPWWNPAVEEQAMDRVHRIGQAKEVNIVRMIARNT 1243
+LLASLKA GAG+NLTAAS+VYL++PWWNPAVEEQAMDR+HRIGQ +EV ++RMIAR++
Sbjct: 760 VVLLASLKASGAGINLTAASRVYLLDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARDS 819
Query: 1244 VEERIXXXXXXXXXXXXXAFGRKGSKEQREITASDLATLMNL 1369
+EER+ AF R+ K++RE+ D+ LM+L
Sbjct: 820 IEERVLELQQKKKNLANEAFKRRQKKDEREVNVEDVIALMSL 861